RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
CLNS1A-201ENST00000263309 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
CLNS1A-201ENST00000263309 ATP7BP35670 1465 aa17.27■□□□□ 0.36
CLNS1A-201ENST00000263309 NLRP6P59044 892 aa17.25■□□□□ 0.35
CLNS1A-201ENST00000263309 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
CLNS1A-201ENST00000263309 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
CLNS1A-201ENST00000263309 TNS3Q68CZ2 1445 aa17.23■□□□□ 0.35
CLNS1A-201ENST00000263309 NGLY1Q96IV0 654 aa17.23■□□□□ 0.35
CLNS1A-201ENST00000263309 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
CLNS1A-201ENST00000263309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLNS1A-201ENST00000263309 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
CLNS1A-201ENST00000263309 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
CLNS1A-201ENST00000263309 ADAMTS2O95450 1211 aa17.21■□□□□ 0.35
CLNS1A-201ENST00000263309 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLNS1A-201ENST00000263309 COG3Q96JB2 828 aa17.21■□□□□ 0.35
CLNS1A-201ENST00000263309 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.34
CLNS1A-201ENST00000263309 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
CLNS1A-201ENST00000263309 ANKRD36BQ8N2N9 1353 aa17.2■□□□□ 0.34
CLNS1A-201ENST00000263309 USP6P35125 1406 aa17.2■□□□□ 0.34
CLNS1A-201ENST00000263309 PXDNQ92626 1479 aa17.19■□□□□ 0.34
CLNS1A-201ENST00000263309 NUTM2GQ5VZR2 741 aa17.19■□□□□ 0.34
CLNS1A-201ENST00000263309 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
CLNS1A-201ENST00000263309 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
CLNS1A-201ENST00000263309 C8orf37Q96NL8 207 aa17.18■□□□□ 0.34
CLNS1A-201ENST00000263309 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
CLNS1A-201ENST00000263309 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
CLNS1A-201ENST00000263309 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
CLNS1A-201ENST00000263309 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
CLNS1A-201ENST00000263309 EVA1CP58658 441 aa17.16■□□□□ 0.34
CLNS1A-201ENST00000263309 PANK3Q9H999 370 aa17.16■□□□□ 0.34
CLNS1A-201ENST00000263309 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
CLNS1A-201ENST00000263309 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
CLNS1A-201ENST00000263309 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
CLNS1A-201ENST00000263309 GCP02774 474 aa17.14■□□□□ 0.33
CLNS1A-201ENST00000263309 CABLES1Q8TDN4 633 aa17.14■□□□□ 0.33
CLNS1A-201ENST00000263309 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
CLNS1A-201ENST00000263309 CDK12Q9NYV4 1490 aaPredicted RBP17.13■□□□□ 0.33
CLNS1A-201ENST00000263309 RXRBP28702 533 aa17.13■□□□□ 0.33
CLNS1A-201ENST00000263309 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
CLNS1A-201ENST00000263309 ZC3H6P61129 1189 aaKnown RBP17.11■□□□□ 0.33
CLNS1A-201ENST00000263309 USP21Q9UK80 565 aa17.11■□□□□ 0.33
CLNS1A-201ENST00000263309 SOX12O15370 315 aa17.1■□□□□ 0.33
CLNS1A-201ENST00000263309 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
CLNS1A-201ENST00000263309 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
CLNS1A-201ENST00000263309 NME9Q86XW9 330 aa17.09■□□□□ 0.33
CLNS1A-201ENST00000263309 TRPC5Q9UL62 973 aaPredicted RBP17.09■□□□□ 0.33
CLNS1A-201ENST00000263309 AFF2P51816 1311 aa17.09■□□□□ 0.33
CLNS1A-201ENST00000263309 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
CLNS1A-201ENST00000263309 MORC1Q86VD1 984 aa17.08■□□□□ 0.32
CLNS1A-201ENST00000263309 USP31Q70CQ4 1352 aa17.07■□□□□ 0.32
CLNS1A-201ENST00000263309 FYB1O15117 783 aa17.07■□□□□ 0.32
CLNS1A-201ENST00000263309 AMPHP49418 695 aa17.07■□□□□ 0.32
CLNS1A-201ENST00000263309 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
CLNS1A-201ENST00000263309 QTRT2Q9H974 415 aaKnown RBP17.07■□□□□ 0.32
CLNS1A-201ENST00000263309 SRCAPQ6ZRS2 3230 aa17.07■□□□□ 0.32
CLNS1A-201ENST00000263309 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
CLNS1A-201ENST00000263309 NSD2O96028 1365 aa17.06■□□□□ 0.32
CLNS1A-201ENST00000263309 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
CLNS1A-201ENST00000263309 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
CLNS1A-201ENST00000263309 UNC5CLQ8IV45 518 aa17.06■□□□□ 0.32
CLNS1A-201ENST00000263309 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
CLNS1A-201ENST00000263309 SSH2Q76I76 1423 aa17.05■□□□□ 0.32
CLNS1A-201ENST00000263309 USP19O94966 1318 aa17.05■□□□□ 0.32
CLNS1A-201ENST00000263309 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
CLNS1A-201ENST00000263309 BTG4Q9NY30 223 aa17.05■□□□□ 0.32
CLNS1A-201ENST00000263309 COL22A1Q8NFW1 1626 aaPredicted RBP17.05■□□□□ 0.32
CLNS1A-201ENST00000263309 RGS12O14924 1447 aa17.04■□□□□ 0.32
CLNS1A-201ENST00000263309 FAM83GA6ND36 823 aa17.04■□□□□ 0.32
CLNS1A-201ENST00000263309 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
CLNS1A-201ENST00000263309 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
CLNS1A-201ENST00000263309 CPDO75976 1380 aa17.02■□□□□ 0.32
CLNS1A-201ENST00000263309 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
CLNS1A-201ENST00000263309 STRN4Q9NRL3 753 aa17.02■□□□□ 0.32
CLNS1A-201ENST00000263309 AKAP12Q02952 1782 aa17.02■□□□□ 0.31
CLNS1A-201ENST00000263309 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
CLNS1A-201ENST00000263309 TRPM3Q9HCF6 1732 aaPredicted RBP17.01■□□□□ 0.31
CLNS1A-201ENST00000263309 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
CLNS1A-201ENST00000263309 A0A0G2JS52 829 aa17■□□□□ 0.31
CLNS1A-201ENST00000263309 MYT1Q01538 1121 aa17■□□□□ 0.31
CLNS1A-201ENST00000263309 CHRNA2Q15822 529 aa17■□□□□ 0.31
CLNS1A-201ENST00000263309 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
CLNS1A-201ENST00000263309 ALS2Q96Q42 1657 aa17■□□□□ 0.31
CLNS1A-201ENST00000263309 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
CLNS1A-201ENST00000263309 TOM1L2Q6ZVM7 507 aa16.99■□□□□ 0.31
CLNS1A-201ENST00000263309 AATKQ6ZMQ8 1374 aa16.99■□□□□ 0.31
CLNS1A-201ENST00000263309 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
CLNS1A-201ENST00000263309 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
CLNS1A-201ENST00000263309 CNGB1Q14028 1251 aaPredicted RBP16.98■□□□□ 0.31
CLNS1A-201ENST00000263309 VPS72Q15906 364 aa16.98■□□□□ 0.31
CLNS1A-201ENST00000263309 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
CLNS1A-201ENST00000263309 ZRANB1Q9UGI0 708 aa16.98■□□□□ 0.31
CLNS1A-201ENST00000263309 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
CLNS1A-201ENST00000263309 IP6K1Q92551 441 aa16.97■□□□□ 0.31
CLNS1A-201ENST00000263309 GJD4Q96KN9 370 aaPredicted RBP16.97■□□□□ 0.31
CLNS1A-201ENST00000263309 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
CLNS1A-201ENST00000263309 THRAP3Q9Y2W1 955 aaKnown RBP16.96■□□□□ 0.31
CLNS1A-201ENST00000263309 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
CLNS1A-201ENST00000263309 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
CLNS1A-201ENST00000263309 CDCA7Q9BWT1 371 aaPredicted RBP16.94■□□□□ 0.3
CLNS1A-201ENST00000263309 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms