RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 HIP1O00291 1037 aa17.73■□□□□ 0.43
PPM1F-201ENST00000263212 TMX4Q9H1E5 349 aaPredicted RBP17.72■□□□□ 0.43
PPM1F-201ENST00000263212 CCT4P50991 539 aaKnown RBP17.72■□□□□ 0.43
PPM1F-201ENST00000263212 PSME1Q06323 249 aa17.72■□□□□ 0.43
PPM1F-201ENST00000263212 MNS1Q8NEH6 495 aa17.72■□□□□ 0.43
PPM1F-201ENST00000263212 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
PPM1F-201ENST00000263212 RIC3Q7Z5B4 369 aa17.71■□□□□ 0.43
PPM1F-201ENST00000263212 CCDC47Q96A33 483 aaKnown RBP17.71■□□□□ 0.43
PPM1F-201ENST00000263212 SDF4Q9BRK5 362 aa17.71■□□□□ 0.43
PPM1F-201ENST00000263212 RALYLQ86SE5 291 aaKnown RBP17.71■□□□□ 0.43
PPM1F-201ENST00000263212 ESPNB1AK53 854 aa17.7■□□□□ 0.42
PPM1F-201ENST00000263212 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
PPM1F-201ENST00000263212 FSD1Q9BTV5 496 aa17.7■□□□□ 0.42
PPM1F-201ENST00000263212 TRIM5Q9C035 493 aa17.7■□□□□ 0.42
PPM1F-201ENST00000263212 WDR33Q9C0J8 1336 aaKnown RBP17.7■□□□□ 0.42
PPM1F-201ENST00000263212 ANO8Q9HCE9 1232 aaPredicted RBP17.7■□□□□ 0.42
PPM1F-201ENST00000263212 CCDC27Q2M243 656 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 CEP89Q96ST8 783 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 NFXL1Q6ZNB6 911 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
PPM1F-201ENST00000263212 PTPN23Q9H3S7 1636 aa17.68■□□□□ 0.42
PPM1F-201ENST00000263212 NLRP6P59044 892 aa17.68■□□□□ 0.42
PPM1F-201ENST00000263212 FIBPO43427 364 aa17.68■□□□□ 0.42
PPM1F-201ENST00000263212 FCHSD2O94868 740 aa17.68■□□□□ 0.42
PPM1F-201ENST00000263212 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
PPM1F-201ENST00000263212 RAPGEF4Q8WZA2 1011 aa17.68■□□□□ 0.42
PPM1F-201ENST00000263212 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
PPM1F-201ENST00000263212 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
PPM1F-201ENST00000263212 RPAP2Q8IXW5 612 aaPredicted RBP17.67■□□□□ 0.42
PPM1F-201ENST00000263212 SRCIN1Q9C0H9 1055 aa17.67■□□□□ 0.42
PPM1F-201ENST00000263212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.67■□□□□ 0.42
PPM1F-201ENST00000263212 KINO60870 393 aaKnown RBP17.67■□□□□ 0.42
PPM1F-201ENST00000263212 C20orf194Q5TEA3 1177 aa17.67■□□□□ 0.42
PPM1F-201ENST00000263212 AEBP1Q8IUX7 1158 aa17.67■□□□□ 0.42
PPM1F-201ENST00000263212 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
PPM1F-201ENST00000263212 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
PPM1F-201ENST00000263212 SETQ01105 290 aaPredicted RBP17.67■□□□□ 0.42
PPM1F-201ENST00000263212 RPRD2Q5VT52 1461 aaKnown RBP17.66■□□□□ 0.42
PPM1F-201ENST00000263212 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
PPM1F-201ENST00000263212 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
PPM1F-201ENST00000263212 ERICH2A1L162 156 aa17.66■□□□□ 0.42
PPM1F-201ENST00000263212 ABCC5O15440 1437 aa17.66■□□□□ 0.42
PPM1F-201ENST00000263212 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
PPM1F-201ENST00000263212 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
PPM1F-201ENST00000263212 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
PPM1F-201ENST00000263212 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
PPM1F-201ENST00000263212 NESP48681 1621 aa17.65■□□□□ 0.42
PPM1F-201ENST00000263212 FOSBP53539 338 aa17.65■□□□□ 0.42
PPM1F-201ENST00000263212 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
PPM1F-201ENST00000263212 OLFM4Q6UX06 510 aa17.65■□□□□ 0.42
PPM1F-201ENST00000263212 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
PPM1F-201ENST00000263212 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
PPM1F-201ENST00000263212 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
PPM1F-201ENST00000263212 SULT6B1Q6IMI4 303 aa17.65■□□□□ 0.42
PPM1F-201ENST00000263212 CCDC192P0DO97 292 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 TMEM57Q8N5G2 664 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 KIAA0586Q9BVV6 1533 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 PCMTD1Q96MG8 357 aaPredicted RBP17.64■□□□□ 0.41
PPM1F-201ENST00000263212 ACBD3Q9H3P7 528 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 WASHC4Q2M389 1173 aa17.64■□□□□ 0.41
PPM1F-201ENST00000263212 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
PPM1F-201ENST00000263212 LRPPRCP42704 1394 aaKnown RBP17.63■□□□□ 0.41
PPM1F-201ENST00000263212 ANKRD1Q15327 319 aa17.63■□□□□ 0.41
PPM1F-201ENST00000263212 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
PPM1F-201ENST00000263212 CCDC141Q6ZP82 1450 aa17.62■□□□□ 0.41
PPM1F-201ENST00000263212 EVA1CP58658 441 aa17.62■□□□□ 0.41
PPM1F-201ENST00000263212 ZNF396Q96N95 335 aaPredicted RBP17.62■□□□□ 0.41
PPM1F-201ENST00000263212 ABCC11Q96J66 1382 aa17.62■□□□□ 0.41
PPM1F-201ENST00000263212 NFE2L2Q16236 605 aa17.62■□□□□ 0.41
PPM1F-201ENST00000263212 CYB5RLQ6IPT4 315 aa17.62■□□□□ 0.41
PPM1F-201ENST00000263212 G3V3G9 751 aa17.61■□□□□ 0.41
PPM1F-201ENST00000263212 DHX8Q14562 1220 aaKnown RBP17.61■□□□□ 0.41
PPM1F-201ENST00000263212 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
PPM1F-201ENST00000263212 KRT85P78386 507 aa17.61■□□□□ 0.41
PPM1F-201ENST00000263212 DUSP27Q5VZP5 1158 aa17.61■□□□□ 0.41
PPM1F-201ENST00000263212 CCP110O43303 1012 aa17.61■□□□□ 0.41
PPM1F-201ENST00000263212 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
PPM1F-201ENST00000263212 ZSCAN30Q86W11 494 aa17.6■□□□□ 0.41
PPM1F-201ENST00000263212 NOL10Q9BSC4 688 aaKnown RBP17.6■□□□□ 0.41
PPM1F-201ENST00000263212 CAMSAP2Q08AD1 1489 aa17.6■□□□□ 0.41
PPM1F-201ENST00000263212 DHX16O60231 1041 aaKnown RBP17.6■□□□□ 0.41
PPM1F-201ENST00000263212 ALDH1L2Q3SY69 923 aa17.6■□□□□ 0.41
PPM1F-201ENST00000263212 PDIA4P13667 645 aaKnown RBP17.6■□□□□ 0.41
PPM1F-201ENST00000263212 RRP9O43818 475 aaKnown RBP17.6■□□□□ 0.41
PPM1F-201ENST00000263212 HSP90B2PQ58FF3 399 aa17.6■□□□□ 0.41
PPM1F-201ENST00000263212 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
PPM1F-201ENST00000263212 ZSCAN31Q96LW9 406 aaPredicted RBP17.58■□□□□ 0.41
PPM1F-201ENST00000263212 IQGAP2Q13576 1575 aa17.58■□□□□ 0.41
PPM1F-201ENST00000263212 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.41
PPM1F-201ENST00000263212 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.41
PPM1F-201ENST00000263212 SKAP1Q86WV1 359 aa17.58■□□□□ 0.4
PPM1F-201ENST00000263212 CUL7Q14999 1698 aa17.58■□□□□ 0.4
PPM1F-201ENST00000263212 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms