RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 AMER1Q5JTC6 1135 aaPredicted RBP33.42■■■□□ 2.94
SCN1B-201ENST00000262631 NHSL1Q5SYE7 1610 aa33.4■■■□□ 2.94
SCN1B-201ENST00000262631 PAK3O75914 559 aaPredicted RBP33.4■■■□□ 2.94
SCN1B-201ENST00000262631 SOS2Q07890 1332 aaPredicted RBP33.39■■■□□ 2.94
SCN1B-201ENST00000262631 CGNL1Q0VF96 1302 aa33.38■■■□□ 2.93
SCN1B-201ENST00000262631 CNGB1Q14028 1251 aaPredicted RBP33.38■■■□□ 2.93
SCN1B-201ENST00000262631 NME9Q86XW9 330 aa33.38■■■□□ 2.93
SCN1B-201ENST00000262631 TRPM3Q9HCF6 1732 aaPredicted RBP33.37■■■□□ 2.93
SCN1B-201ENST00000262631 FYB1O15117 783 aa33.37■■■□□ 2.93
SCN1B-201ENST00000262631 DIEXFQ68CQ4 756 aaKnown RBP33.36■■■□□ 2.93
SCN1B-201ENST00000262631 AHDC1Q5TGY3 1603 aaPredicted RBP33.36■■■□□ 2.93
SCN1B-201ENST00000262631 BRD4O60885 1362 aaPredicted RBP33.36■■■□□ 2.93
SCN1B-201ENST00000262631 TTC21AQ8NDW8 1320 aa33.35■■■□□ 2.93
SCN1B-201ENST00000262631 ZRANB1Q9UGI0 708 aa33.35■■■□□ 2.93
SCN1B-201ENST00000262631 CC2D1BQ5T0F9 858 aaKnown RBP33.34■■■□□ 2.93
SCN1B-201ENST00000262631 GGNBP2Q9H3C7 697 aa33.33■■■□□ 2.93
SCN1B-201ENST00000262631 SBNO1A3KN83 1393 aa33.33■■■□□ 2.93
SCN1B-201ENST00000262631 PIK3C2AO00443 1686 aa33.3■■■□□ 2.92
SCN1B-201ENST00000262631 NUTM2GQ5VZR2 741 aa33.3■■■□□ 2.92
SCN1B-201ENST00000262631 ABTB2Q8N961 1025 aa33.3■■■□□ 2.92
SCN1B-201ENST00000262631 SPATA31A3Q5VYP0 1347 aa33.3■■■□□ 2.92
SCN1B-201ENST00000262631 NPC1L1Q9UHC9 1359 aa33.29■■■□□ 2.92
SCN1B-201ENST00000262631 TNS3Q68CZ2 1445 aa33.29■■■□□ 2.92
SCN1B-201ENST00000262631 LMOD2Q6P5Q4 547 aa33.28■■■□□ 2.92
SCN1B-201ENST00000262631 ALS2Q96Q42 1657 aa33.26■■■□□ 2.92
SCN1B-201ENST00000262631 KIF20BQ96Q89 1820 aa33.26■■■□□ 2.91
SCN1B-201ENST00000262631 PHLPP1O60346 1717 aa33.26■■■□□ 2.91
SCN1B-201ENST00000262631 NSD2O96028 1365 aa33.25■■■□□ 2.91
SCN1B-201ENST00000262631 NLRP6P59044 892 aa33.25■■■□□ 2.91
SCN1B-201ENST00000262631 COL16A1Q07092 1604 aaPredicted RBP33.25■■■□□ 2.91
SCN1B-201ENST00000262631 OVOS2A0A0J9YW53 1432 aa33.24■■■□□ 2.91
SCN1B-201ENST00000262631 OVOS2Q6IE36 1432 aa33.24■■■□□ 2.91
SCN1B-201ENST00000262631 USP31Q70CQ4 1352 aa33.23■■■□□ 2.91
SCN1B-201ENST00000262631 LRRC59Q96AG4 307 aaKnown RBP33.21■■■□□ 2.91
SCN1B-201ENST00000262631 COG3Q96JB2 828 aa33.21■■■□□ 2.91
SCN1B-201ENST00000262631 PLEKHG5O94827 1062 aa33.2■■■□□ 2.9
SCN1B-201ENST00000262631 ARHGEF10O15013 1369 aa33.19■■■□□ 2.9
SCN1B-201ENST00000262631 MORC1Q86VD1 984 aa33.19■■■□□ 2.9
SCN1B-201ENST00000262631 PRKRIP1Q9H875 184 aaPredicted RBP33.19■■■□□ 2.9
SCN1B-201ENST00000262631 PARD3Q8TEW0 1356 aa33.18■■■□□ 2.9
SCN1B-201ENST00000262631 FBXO41Q8TF61 875 aa33.18■■■□□ 2.9
SCN1B-201ENST00000262631 MARF1Q9Y4F3 1742 aaKnown RBP33.18■■■□□ 2.9
SCN1B-201ENST00000262631 HSPA1LP34931 641 aa33.17■■■□□ 2.9
SCN1B-201ENST00000262631 NLRP13Q86W25 1043 aa33.17■■■□□ 2.9
SCN1B-201ENST00000262631 TNNT2P45379 298 aaPredicted RBP33.17■■■□□ 2.9
SCN1B-201ENST00000262631 ANKRD26Q9UPS8 1709 aa33.16■■■□□ 2.9
SCN1B-201ENST00000262631 ANP32CO43423 234 aa33.16■■■□□ 2.9
SCN1B-201ENST00000262631 FBLN1P23142 703 aa33.15■■■□□ 2.9
SCN1B-201ENST00000262631 USP54Q70EL1 1684 aa33.14■■■□□ 2.9
SCN1B-201ENST00000262631 USP19O94966 1318 aa33.14■■■□□ 2.9
SCN1B-201ENST00000262631 CABLES1Q8TDN4 633 aa33.13■■■□□ 2.89
SCN1B-201ENST00000262631 MED1Q15648 1581 aaPredicted RBP33.13■■■□□ 2.89
SCN1B-201ENST00000262631 SOX12O15370 315 aa33.13■■■□□ 2.89
SCN1B-201ENST00000262631 PNPLA6Q8IY17 1366 aa33.12■■■□□ 2.89
SCN1B-201ENST00000262631 RALBP1Q15311 655 aa33.11■■■□□ 2.89
SCN1B-201ENST00000262631 ILDR1Q86SU0 546 aaPredicted RBP33.11■■■□□ 2.89
SCN1B-201ENST00000262631 SLIT3O75094 1523 aa33.08■■■□□ 2.89
SCN1B-201ENST00000262631 GCP02774 474 aa33.07■■■□□ 2.89
SCN1B-201ENST00000262631 CRYBG1Q9Y4K1 1723 aa33.05■■■□□ 2.88
SCN1B-201ENST00000262631 PPP2R1AP30153 589 aa33.04■■■□□ 2.88
SCN1B-201ENST00000262631 MIER1Q8N108 512 aa33.04■■■□□ 2.88
SCN1B-201ENST00000262631 NFAT5O94916 1531 aa33.04■■■□□ 2.88
SCN1B-201ENST00000262631 RRS1Q15050 365 aaKnown RBP33.03■■■□□ 2.88
SCN1B-201ENST00000262631 COL22A1Q8NFW1 1626 aaPredicted RBP33.03■■■□□ 2.88
SCN1B-201ENST00000262631 PHRF1Q9P1Y6 1649 aaKnown RBP33.03■■■□□ 2.88
SCN1B-201ENST00000262631 KCNH5Q8NCM2 988 aa33.02■■■□□ 2.88
SCN1B-201ENST00000262631 AATKQ6ZMQ8 1374 aa33.02■■■□□ 2.88
SCN1B-201ENST00000262631 JCADQ9P266 1359 aa33.02■■■□□ 2.88
SCN1B-201ENST00000262631 MYBBP1AQ9BQG0 1328 aaKnown RBP33.01■■■□□ 2.87
SCN1B-201ENST00000262631 POLKQ9UBT6 870 aa33■■■□□ 2.87
SCN1B-201ENST00000262631 EMILIN1Q9Y6C2 1016 aa32.99■■■□□ 2.87
SCN1B-201ENST00000262631 ABCA3Q99758 1704 aa32.99■■■□□ 2.87
SCN1B-201ENST00000262631 SHPRHQ149N8 1683 aa32.99■■■□□ 2.87
SCN1B-201ENST00000262631 MAP3K19Q56UN5 1328 aa32.98■■■□□ 2.87
SCN1B-201ENST00000262631 ZC3H6P61129 1189 aaKnown RBP32.97■■■□□ 2.87
SCN1B-201ENST00000262631 HAP1P54257 671 aaPredicted RBP32.96■■■□□ 2.87
SCN1B-201ENST00000262631 MTHFSP49914 203 aa32.95■■■□□ 2.87
SCN1B-201ENST00000262631 ARHGEF25Q86VW2 580 aa32.94■■■□□ 2.86
SCN1B-201ENST00000262631 PPM1GO15355 546 aaPredicted RBP32.93■■■□□ 2.86
SCN1B-201ENST00000262631 KIAA0232Q92628 1395 aa32.92■■■□□ 2.86
SCN1B-201ENST00000262631 SMG6Q86US8 1419 aaKnown RBP32.92■■■□□ 2.86
SCN1B-201ENST00000262631 ZBTB7CA1YPR0 619 aa32.91■■■□□ 2.86
SCN1B-201ENST00000262631 NUTM2BA6NNL0 878 aaPredicted RBP32.91■■■□□ 2.86
SCN1B-201ENST00000262631 NUTM2EB1AL46 878 aaPredicted RBP32.91■■■□□ 2.86
SCN1B-201ENST00000262631 CCDC184Q52MB2 194 aa32.91■■■□□ 2.86
SCN1B-201ENST00000262631 NUTM2AQ8IVF1 878 aaPredicted RBP32.91■■■□□ 2.86
SCN1B-201ENST00000262631 MAP2P11137 1827 aaKnown RBP32.91■■■□□ 2.86
SCN1B-201ENST00000262631 CPDO75976 1380 aa32.89■■■□□ 2.86
SCN1B-201ENST00000262631 PEAK1Q9H792 1746 aa32.89■■■□□ 2.86
SCN1B-201ENST00000262631 AMPHP49418 695 aa32.87■■■□□ 2.85
SCN1B-201ENST00000262631 CHRNA2Q15822 529 aa32.87■■■□□ 2.85
SCN1B-201ENST00000262631 LTN1O94822 1766 aa32.87■■■□□ 2.85
SCN1B-201ENST00000262631 SPATA31A6Q5VVP1 1343 aa32.87■■■□□ 2.85
SCN1B-201ENST00000262631 ADAMTS2O95450 1211 aa32.85■■■□□ 2.85
SCN1B-201ENST00000262631 PRDM11Q9NQV5 511 aa32.85■■■□□ 2.85
SCN1B-201ENST00000262631 HOXC9P31274 260 aa32.84■■■□□ 2.85
SCN1B-201ENST00000262631 HSP90AB2PQ58FF8 381 aa32.84■■■□□ 2.85
SCN1B-201ENST00000262631 LRP6O75581 1613 aa32.84■■■□□ 2.85
SCN1B-201ENST00000262631 CDK12Q9NYV4 1490 aaPredicted RBP32.83■■■□□ 2.85
SCN1B-201ENST00000262631 AXIN2Q9Y2T1 843 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms