RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CDK19Q9BWU1 502 aa23.54■■□□□ 1.36
SSB-201ENST00000260956 ZNF521Q96K83 1311 aa23.53■■□□□ 1.36
SSB-201ENST00000260956 RGPD8O14715 1765 aaPredicted RBP23.51■■□□□ 1.35
SSB-201ENST00000260956 POLR3AO14802 1390 aaPredicted RBP23.51■■□□□ 1.35
SSB-201ENST00000260956 ANKRD36BQ8N2N9 1353 aa23.51■■□□□ 1.35
SSB-201ENST00000260956 FOXO3O43524 673 aa23.5■■□□□ 1.35
SSB-201ENST00000260956 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
SSB-201ENST00000260956 EVC2Q86UK5 1308 aa23.49■■□□□ 1.35
SSB-201ENST00000260956 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
SSB-201ENST00000260956 NUDT16Q96DE0 195 aaKnown RBP23.48■■□□□ 1.35
SSB-201ENST00000260956 AHDC1Q5TGY3 1603 aaPredicted RBP23.48■■□□□ 1.35
SSB-201ENST00000260956 XPCQ01831 940 aaPredicted RBP23.47■■□□□ 1.35
SSB-201ENST00000260956 CDCA7LQ96GN5 454 aa23.47■■□□□ 1.35
SSB-201ENST00000260956 NINLQ9Y2I6 1382 aa23.47■■□□□ 1.35
SSB-201ENST00000260956 ATP7BP35670 1465 aa23.47■■□□□ 1.35
SSB-201ENST00000260956 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
SSB-201ENST00000260956 ANKRD26Q9UPS8 1709 aa23.47■■□□□ 1.35
SSB-201ENST00000260956 PMFBP1Q8TBY8 1022 aa23.47■■□□□ 1.35
SSB-201ENST00000260956 CD163L1Q9NR16 1453 aa23.47■■□□□ 1.35
SSB-201ENST00000260956 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
SSB-201ENST00000260956 COL16A1Q07092 1604 aaPredicted RBP23.46■■□□□ 1.35
SSB-201ENST00000260956 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
SSB-201ENST00000260956 NSD2O96028 1365 aa23.45■■□□□ 1.34
SSB-201ENST00000260956 NHSL1Q5SYE7 1610 aa23.45■■□□□ 1.34
SSB-201ENST00000260956 RRP1P56182 461 aaKnown RBP23.44■■□□□ 1.34
SSB-201ENST00000260956 SRPK2P78362 688 aaKnown RBP23.44■■□□□ 1.34
SSB-201ENST00000260956 SOS2Q07890 1332 aaPredicted RBP23.43■■□□□ 1.34
SSB-201ENST00000260956 WDR43Q15061 677 aaKnown RBP eCLIP23.42■■□□□ 1.34
SSB-201ENST00000260956 RCAN3Q9UKA8 241 aa23.42■■□□□ 1.34
SSB-201ENST00000260956 PXDNQ92626 1479 aa23.41■■□□□ 1.34
SSB-201ENST00000260956 CCDC61Q9Y6R9 512 aa23.41■■□□□ 1.34
SSB-201ENST00000260956 B4GALNT3Q6L9W6 998 aa23.4■■□□□ 1.34
SSB-201ENST00000260956 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
SSB-201ENST00000260956 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
SSB-201ENST00000260956 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
SSB-201ENST00000260956 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.34
SSB-201ENST00000260956 CGNL1Q0VF96 1302 aa23.37■■□□□ 1.33
SSB-201ENST00000260956 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
SSB-201ENST00000260956 CABP1Q9NZU7 370 aa23.36■■□□□ 1.33
SSB-201ENST00000260956 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
SSB-201ENST00000260956 TOPAZ1Q8N9V7 1692 aa23.35■■□□□ 1.33
SSB-201ENST00000260956 TRMT2AQ8IZ69 625 aaKnown RBP23.35■■□□□ 1.33
SSB-201ENST00000260956 KIF1AQ12756 1690 aa23.35■■□□□ 1.33
SSB-201ENST00000260956 PPIP5K1Q6PFW1 1433 aa23.34■■□□□ 1.33
SSB-201ENST00000260956 ACEP12821 1306 aa23.34■■□□□ 1.33
SSB-201ENST00000260956 DUSP27Q5VZP5 1158 aa23.34■■□□□ 1.33
SSB-201ENST00000260956 LRRC59Q96AG4 307 aaKnown RBP23.34■■□□□ 1.33
SSB-201ENST00000260956 KIF20BQ96Q89 1820 aa23.34■■□□□ 1.33
SSB-201ENST00000260956 COL3A1P02461 1466 aaPredicted RBP23.34■■□□□ 1.33
SSB-201ENST00000260956 JCADQ9P266 1359 aa23.34■■□□□ 1.33
SSB-201ENST00000260956 PSME1Q06323 249 aa23.33■■□□□ 1.33
SSB-201ENST00000260956 MORC1Q86VD1 984 aa23.33■■□□□ 1.33
SSB-201ENST00000260956 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.32
SSB-201ENST00000260956 PNPLA6Q8IY17 1366 aa23.31■■□□□ 1.32
SSB-201ENST00000260956 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
SSB-201ENST00000260956 SPATA31A3Q5VYP0 1347 aa23.29■■□□□ 1.32
SSB-201ENST00000260956 RBM19Q9Y4C8 960 aaKnown RBP23.29■■□□□ 1.32
SSB-201ENST00000260956 ITSN1Q15811 1721 aa23.28■■□□□ 1.32
SSB-201ENST00000260956 SLFN5Q08AF3 891 aa23.28■■□□□ 1.32
SSB-201ENST00000260956 CCDC146Q8IYE0 955 aa23.28■■□□□ 1.32
SSB-201ENST00000260956 APAF1O14727 1248 aa23.27■■□□□ 1.32
SSB-201ENST00000260956 LRP6O75581 1613 aa23.26■■□□□ 1.31
SSB-201ENST00000260956 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
SSB-201ENST00000260956 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
SSB-201ENST00000260956 TRPM3Q9HCF6 1732 aaPredicted RBP23.25■■□□□ 1.31
SSB-201ENST00000260956 SBNO1A3KN83 1393 aa23.25■■□□□ 1.31
SSB-201ENST00000260956 EXOC6Q8TAG9 804 aa23.24■■□□□ 1.31
SSB-201ENST00000260956 SPINK5Q9NQ38 1064 aaPredicted RBP23.24■■□□□ 1.31
SSB-201ENST00000260956 TNS3Q68CZ2 1445 aa23.23■■□□□ 1.31
SSB-201ENST00000260956 NUTM2BA6NNL0 878 aaPredicted RBP23.23■■□□□ 1.31
SSB-201ENST00000260956 NUTM2EB1AL46 878 aaPredicted RBP23.23■■□□□ 1.31
SSB-201ENST00000260956 MTHFSP49914 203 aa23.23■■□□□ 1.31
SSB-201ENST00000260956 NUTM2AQ8IVF1 878 aaPredicted RBP23.23■■□□□ 1.31
SSB-201ENST00000260956 MON2Q7Z3U7 1717 aa23.22■■□□□ 1.31
SSB-201ENST00000260956 PAK3O75914 559 aaPredicted RBP23.22■■□□□ 1.31
SSB-201ENST00000260956 CPSF1Q10570 1443 aaKnown RBP23.22■■□□□ 1.31
SSB-201ENST00000260956 LMOD2Q6P5Q4 547 aa23.22■■□□□ 1.31
SSB-201ENST00000260956 CABLES1Q8TDN4 633 aa23.22■■□□□ 1.31
SSB-201ENST00000260956 SPATA31A6Q5VVP1 1343 aa23.21■■□□□ 1.31
SSB-201ENST00000260956 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
SSB-201ENST00000260956 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
SSB-201ENST00000260956 SSH2Q76I76 1423 aa23.21■■□□□ 1.31
SSB-201ENST00000260956 CCDC136Q96JN2 1154 aa23.2■■□□□ 1.3
SSB-201ENST00000260956 USP6P35125 1406 aa23.2■■□□□ 1.3
SSB-201ENST00000260956 AKAP12Q02952 1782 aa23.2■■□□□ 1.3
SSB-201ENST00000260956 TERF2IPQ9NYB0 399 aa23.19■■□□□ 1.3
SSB-201ENST00000260956 FYB1O15117 783 aa23.19■■□□□ 1.3
SSB-201ENST00000260956 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
SSB-201ENST00000260956 ALS2Q96Q42 1657 aa23.18■■□□□ 1.3
SSB-201ENST00000260956 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
SSB-201ENST00000260956 NUTM2GQ5VZR2 741 aa23.18■■□□□ 1.3
SSB-201ENST00000260956 COL22A1Q8NFW1 1626 aaPredicted RBP23.17■■□□□ 1.3
SSB-201ENST00000260956 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
SSB-201ENST00000260956 E9PSI1 815 aa23.15■■□□□ 1.3
SSB-201ENST00000260956 PLIN1O60240 522 aa23.15■■□□□ 1.3
SSB-201ENST00000260956 ADAMTS2O95450 1211 aa23.15■■□□□ 1.3
SSB-201ENST00000260956 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
SSB-201ENST00000260956 ZNF692Q9BU19 519 aaPredicted RBP23.15■■□□□ 1.3
SSB-201ENST00000260956 RGS17Q9UGC6 210 aaPredicted RBP23.15■■□□□ 1.3
SSB-201ENST00000260956 ARHGEF10O15013 1369 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms