RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
PRPF38A-201ENST00000257181 MARCH6O60337 910 aa16.51■□□□□ 0.23
PRPF38A-201ENST00000257181 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 POLD1P28340 1107 aa16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 ARHGEF10O15013 1369 aa16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 ERICH2A1L162 156 aa16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 TRDNQ13061 729 aa16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
PRPF38A-201ENST00000257181 HIP1O00291 1037 aa16.49■□□□□ 0.23
PRPF38A-201ENST00000257181 NOS1P29475 1434 aa16.49■□□□□ 0.23
PRPF38A-201ENST00000257181 TOMM22Q9NS69 142 aa16.48■□□□□ 0.23
PRPF38A-201ENST00000257181 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
PRPF38A-201ENST00000257181 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
PRPF38A-201ENST00000257181 ZSCAN25Q6NSZ9 544 aa16.47■□□□□ 0.23
PRPF38A-201ENST00000257181 TCERG1O14776 1098 aaKnown RBP16.47■□□□□ 0.23
PRPF38A-201ENST00000257181 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
PRPF38A-201ENST00000257181 CLSTN1O94985 981 aa16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 TPM4P67936 248 aa16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 AK7Q96M32 723 aa16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 CCAR1Q8IX12 1150 aaKnown RBP16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 ABCC11Q96J66 1382 aa16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 ADAMTS2O95450 1211 aa16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 DIAPH3Q9NSV4 1193 aa16.46■□□□□ 0.23
PRPF38A-201ENST00000257181 CCT4P50991 539 aaKnown RBP16.45■□□□□ 0.22
PRPF38A-201ENST00000257181 KIAA2012Q0VF49 1180 aa16.45■□□□□ 0.22
PRPF38A-201ENST00000257181 SLF2Q8IX21 1173 aa16.45■□□□□ 0.22
PRPF38A-201ENST00000257181 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
PRPF38A-201ENST00000257181 NLRP1Q9C000 1473 aa16.44■□□□□ 0.22
PRPF38A-201ENST00000257181 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■□□□ 14.5
PRPF38A-201ENST00000257181 CFAP43Q8NDM7 1665 aa16.44■□□□□ 0.22
PRPF38A-201ENST00000257181 RGS3P49796 1198 aa16.44■□□□□ 0.22
PRPF38A-201ENST00000257181 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
PRPF38A-201ENST00000257181 SIRT1Q96EB6 747 aa16.44■□□□□ 0.22
PRPF38A-201ENST00000257181 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
PRPF38A-201ENST00000257181 MAGI3Q5TCQ9 1506 aa16.43■□□□□ 0.22
PRPF38A-201ENST00000257181 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
PRPF38A-201ENST00000257181 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
PRPF38A-201ENST00000257181 IGHMBP2P38935 993 aaKnown RBP16.42■□□□□ 0.22
PRPF38A-201ENST00000257181 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
PRPF38A-201ENST00000257181 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
PRPF38A-201ENST00000257181 SAMD9Q5K651 1589 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 ZC3H6P61129 1189 aaKnown RBP16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 DZIP1LQ8IYY4 767 aaKnown RBP16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 CHD1O14646 1710 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 ARAP3Q8WWN8 1544 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 ST18O60284 1047 aa16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 ZNF772Q68DY9 489 aaPredicted RBP16.41■□□□□ 0.22
PRPF38A-201ENST00000257181 ARHGEF5Q12774 1597 aa16.4■□□□□ 0.22
PRPF38A-201ENST00000257181 HMOX1P09601 288 aa16.4■□□□□ 0.22
PRPF38A-201ENST00000257181 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
PRPF38A-201ENST00000257181 SYAP1Q96A49 352 aaPredicted RBP16.4■□□□□ 0.22
PRPF38A-201ENST00000257181 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
PRPF38A-201ENST00000257181 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
PRPF38A-201ENST00000257181 RRP7AQ9Y3A4 280 aaKnown RBP16.4■□□□□ 0.22
PRPF38A-201ENST00000257181 ST5P78524 1137 aa16.39■□□□□ 0.22
PRPF38A-201ENST00000257181 TRIM29Q14134 588 aa16.39■□□□□ 0.22
PRPF38A-201ENST00000257181 SART3Q15020 963 aaKnown RBP16.39■□□□□ 0.22
PRPF38A-201ENST00000257181 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 REC8O95072 547 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 KDM6BO15054 1643 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 APBB1O00213 710 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 MPHOSPH8Q99549 860 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 FOXO3O43524 673 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 ZNF287Q9HBT7 754 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 MAST1Q9Y2H9 1570 aa16.39■□□□□ 0.21
PRPF38A-201ENST00000257181 ABCA8O94911 1581 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 APAF1O14727 1248 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 MLH3Q9UHC1 1453 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 NSD3Q9BZ95 1437 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 PPP2R1AP30153 589 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
PRPF38A-201ENST00000257181 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
PRPF38A-201ENST00000257181 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
PRPF38A-201ENST00000257181 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
PRPF38A-201ENST00000257181 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
PRPF38A-201ENST00000257181 XBP1P17861 261 aa16.37■□□□□ 0.21
PRPF38A-201ENST00000257181 PIK3R4Q99570 1358 aa16.36■□□□□ 0.21
PRPF38A-201ENST00000257181 STK32BQ9NY57 414 aa16.36■□□□□ 0.21
PRPF38A-201ENST00000257181 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
PRPF38A-201ENST00000257181 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
PRPF38A-201ENST00000257181 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
PRPF38A-201ENST00000257181 PIK3C2GO75747 1445 aa16.36■□□□□ 0.21
PRPF38A-201ENST00000257181 TULP1O00294 542 aaPredicted RBP16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 NACAP1Q9BZK3 213 aa16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 BRMS1Q9HCU9 246 aa16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 DDB1Q16531 1140 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms