RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 CCDC61Q9Y6R9 512 aa33.34■■■□□ 2.93
ACTR3B-201ENST00000256001 NCKAP5LQ9HCH0 1330 aa33.34■■■□□ 2.93
ACTR3B-201ENST00000256001 EDC4Q6P2E9 1401 aaKnown RBP33.33■■■□□ 2.93
ACTR3B-201ENST00000256001 FBLN1P23142 703 aa33.33■■■□□ 2.93
ACTR3B-201ENST00000256001 PLPPR3Q6T4P5 718 aa33.33■■■□□ 2.93
ACTR3B-201ENST00000256001 MAPK8IP3Q9UPT6 1336 aa33.33■■■□□ 2.93
ACTR3B-201ENST00000256001 ROBO2Q9HCK4 1378 aa33.33■■■□□ 2.93
ACTR3B-201ENST00000256001 PLEKHG1Q9ULL1 1385 aa33.33■■■□□ 2.93
ACTR3B-201ENST00000256001 PPM1GO15355 546 aaPredicted RBP33.32■■■□□ 2.92
ACTR3B-201ENST00000256001 MYH16Q9H6N6 1097 aa33.32■■■□□ 2.92
ACTR3B-201ENST00000256001 POLKQ9UBT6 870 aa33.31■■■□□ 2.92
ACTR3B-201ENST00000256001 KDM2BQ8NHM5 1336 aa33.3■■■□□ 2.92
ACTR3B-201ENST00000256001 CANXP27824 592 aaKnown RBP33.3■■■□□ 2.92
ACTR3B-201ENST00000256001 TMPOP42166 694 aaKnown RBP33.3■■■□□ 2.92
ACTR3B-201ENST00000256001 ANP32EQ9BTT0 268 aa33.3■■■□□ 2.92
ACTR3B-201ENST00000256001 NME9Q86XW9 330 aa33.29■■■□□ 2.92
ACTR3B-201ENST00000256001 RARSP54136 660 aaKnown RBP33.28■■■□□ 2.92
ACTR3B-201ENST00000256001 EID1Q9Y6B2 187 aa33.28■■■□□ 2.92
ACTR3B-201ENST00000256001 PDE3AQ14432 1141 aa33.27■■■□□ 2.92
ACTR3B-201ENST00000256001 CENPQQ7L2Z9 268 aaPredicted RBP33.27■■■□□ 2.92
ACTR3B-201ENST00000256001 CDC42BPGQ6DT37 1551 aa33.27■■■□□ 2.92
ACTR3B-201ENST00000256001 C3P01024 1663 aa33.26■■■□□ 2.91
ACTR3B-201ENST00000256001 PNNQ9H307 717 aaKnown RBP33.26■■■□□ 2.91
ACTR3B-201ENST00000256001 MS4A1P11836 297 aa33.25■■■□□ 2.91
ACTR3B-201ENST00000256001 SLC26A8Q96RN1 970 aa33.25■■■□□ 2.91
ACTR3B-201ENST00000256001 FRAT1Q92837 279 aaPredicted RBP33.25■■■□□ 2.91
ACTR3B-201ENST00000256001 PRR36Q9H6K5 1346 aa33.24■■■□□ 2.91
ACTR3B-201ENST00000256001 SKAP1Q86WV1 359 aa33.24■■■□□ 2.91
ACTR3B-201ENST00000256001 ZRANB1Q9UGI0 708 aa33.24■■■□□ 2.91
ACTR3B-201ENST00000256001 TRIM35Q9UPQ4 493 aa33.24■■■□□ 2.91
ACTR3B-201ENST00000256001 TRHP20396 242 aaPredicted RBP33.22■■■□□ 2.91
ACTR3B-201ENST00000256001 FCHSD2O94868 740 aa33.21■■■□□ 2.91
ACTR3B-201ENST00000256001 MAP2P11137 1827 aaKnown RBP33.2■■■□□ 2.91
ACTR3B-201ENST00000256001 RIPK4P57078 832 aa33.2■■■□□ 2.91
ACTR3B-201ENST00000256001 PANK1Q8TE04 598 aa33.2■■■□□ 2.91
ACTR3B-201ENST00000256001 ZNF692Q9BU19 519 aaPredicted RBP33.2■■■□□ 2.91
ACTR3B-201ENST00000256001 EMILIN1Q9Y6C2 1016 aa33.2■■■□□ 2.91
ACTR3B-201ENST00000256001 COG3Q96JB2 828 aa33.2■■■□□ 2.9
ACTR3B-201ENST00000256001 PDE4AP27815 886 aa33.19■■■□□ 2.9
ACTR3B-201ENST00000256001 MON2Q7Z3U7 1717 aa33.19■■■□□ 2.9
ACTR3B-201ENST00000256001 FER1L4A9Z1Z3 1794 aa33.19■■■□□ 2.9
ACTR3B-201ENST00000256001 TSR2Q969E8 191 aaKnown RBP33.18■■■□□ 2.9
ACTR3B-201ENST00000256001 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.18■■■□□ 2.9
ACTR3B-201ENST00000256001 BCL2L13Q9BXK5 485 aa33.18■■■□□ 2.9
ACTR3B-201ENST00000256001 COG6Q9Y2V7 657 aa33.17■■■□□ 2.9
ACTR3B-201ENST00000256001 PTPRUQ92729 1446 aa33.16■■■□□ 2.9
ACTR3B-201ENST00000256001 SLIT1O75093 1534 aa33.16■■■□□ 2.9
ACTR3B-201ENST00000256001 ITSN1Q15811 1721 aa33.16■■■□□ 2.9
ACTR3B-201ENST00000256001 AKAP12Q02952 1782 aa33.15■■■□□ 2.9
ACTR3B-201ENST00000256001 RSPH6AQ9H0K4 717 aa33.15■■■□□ 2.9
ACTR3B-201ENST00000256001 ARHGAP23Q9P227 1491 aa33.15■■■□□ 2.9
ACTR3B-201ENST00000256001 AATKQ6ZMQ8 1374 aa33.15■■■□□ 2.9
ACTR3B-201ENST00000256001 NUTM2FA1L443 756 aa33.14■■■□□ 2.9
ACTR3B-201ENST00000256001 PRKAR2BP31323 418 aa33.14■■■□□ 2.9
ACTR3B-201ENST00000256001 LRRC7Q96NW7 1537 aa33.14■■■□□ 2.9
ACTR3B-201ENST00000256001 ANP32AP39687 249 aaKnown RBP33.13■■■□□ 2.89
ACTR3B-201ENST00000256001 THEMISQ8N1K5 641 aaPredicted RBP33.13■■■□□ 2.89
ACTR3B-201ENST00000256001 BACH2Q9BYV9 841 aa33.13■■■□□ 2.89
ACTR3B-201ENST00000256001 NEFMP07197 916 aa33.13■■■□□ 2.89
ACTR3B-201ENST00000256001 AMOTL2Q9Y2J4 779 aa33.13■■■□□ 2.89
ACTR3B-201ENST00000256001 IL16Q14005 1332 aa33.12■■■□□ 2.89
ACTR3B-201ENST00000256001 ERICH6Q7L0X2 663 aa33.12■■■□□ 2.89
ACTR3B-201ENST00000256001 HMOX1P09601 288 aa33.11■■■□□ 2.89
ACTR3B-201ENST00000256001 CT47B1P0C2W7 299 aaPredicted RBP33.1■■■□□ 2.89
ACTR3B-201ENST00000256001 EXOSC9Q06265 439 aaKnown RBP33.1■■■□□ 2.89
ACTR3B-201ENST00000256001 TBX22Q9Y458 520 aa33.1■■■□□ 2.89
ACTR3B-201ENST00000256001 CDK12Q9NYV4 1490 aaPredicted RBP33.1■■■□□ 2.89
ACTR3B-201ENST00000256001 RRS1Q15050 365 aaKnown RBP33.1■■■□□ 2.89
ACTR3B-201ENST00000256001 CLUAP1Q96AJ1 413 aa33.1■■■□□ 2.89
ACTR3B-201ENST00000256001 IL13P35225 146 aa33.09■■■□□ 2.89
ACTR3B-201ENST00000256001 ACEP12821 1306 aa33.09■■■□□ 2.89
ACTR3B-201ENST00000256001 TNNQ9UQP3 1299 aa33.08■■■□□ 2.89
ACTR3B-201ENST00000256001 PLEKHG3A1L390 1219 aa33.06■■■□□ 2.88
ACTR3B-201ENST00000256001 RLBP1P12271 317 aa33.06■■■□□ 2.88
ACTR3B-201ENST00000256001 MYT1Q01538 1121 aa33.06■■■□□ 2.88
ACTR3B-201ENST00000256001 TTC21BQ7Z4L5 1316 aa33.06■■■□□ 2.88
ACTR3B-201ENST00000256001 PHACTR3Q96KR7 559 aa33.05■■■□□ 2.88
ACTR3B-201ENST00000256001 TOPAZ1Q8N9V7 1692 aa33.04■■■□□ 2.88
ACTR3B-201ENST00000256001 IGHDP01880 384 aa33.04■■■□□ 2.88
ACTR3B-201ENST00000256001 NFE2L2Q16236 605 aa33.01■■■□□ 2.88
ACTR3B-201ENST00000256001 SMC4Q9NTJ3 1288 aa33.01■■■□□ 2.87
ACTR3B-201ENST00000256001 ZKSCAN2Q63HK3 967 aa33■■■□□ 2.87
ACTR3B-201ENST00000256001 IPO9Q96P70 1041 aaKnown RBP33■■■□□ 2.87
ACTR3B-201ENST00000256001 NPM2Q86SE8 214 aaKnown RBP33■■■□□ 2.87
ACTR3B-201ENST00000256001 PTCH1Q13635 1447 aa32.99■■■□□ 2.87
ACTR3B-201ENST00000256001 USP6P35125 1406 aa32.99■■■□□ 2.87
ACTR3B-201ENST00000256001 AAMPQ13685 434 aa32.98■■■□□ 2.87
ACTR3B-201ENST00000256001 NRKQ7Z2Y5 1582 aa32.98■■■□□ 2.87
ACTR3B-201ENST00000256001 SSH1Q8WYL5 1049 aa32.97■■■□□ 2.87
ACTR3B-201ENST00000256001 RGS3P49796 1198 aa32.97■■■□□ 2.87
ACTR3B-201ENST00000256001 NOP58Q9Y2X3 529 aaKnown RBP32.97■■■□□ 2.87
ACTR3B-201ENST00000256001 DIP2AQ14689 1571 aa32.96■■■□□ 2.87
ACTR3B-201ENST00000256001 FTSJ3Q8IY81 847 aaKnown RBP32.94■■■□□ 2.86
ACTR3B-201ENST00000256001 LAS1LQ9Y4W2 734 aaKnown RBP32.94■■■□□ 2.86
ACTR3B-201ENST00000256001 DZIP1LQ8IYY4 767 aaKnown RBP32.94■■■□□ 2.86
ACTR3B-201ENST00000256001 PMFBP1Q8TBY8 1022 aa32.94■■■□□ 2.86
ACTR3B-201ENST00000256001 OVOS2A0A0J9YW53 1432 aa32.93■■■□□ 2.86
ACTR3B-201ENST00000256001 OVOS2Q6IE36 1432 aa32.93■■■□□ 2.86
ACTR3B-201ENST00000256001 MVPQ14764 893 aaKnown RBP32.92■■■□□ 2.86
ACTR3B-201ENST00000256001 THUMPD2Q9BTF0 503 aaKnown RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms