RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 SOCS7O14512 581 aa35.4■■■■□ 3.26
LSM7-201ENST00000252622 TESK2Q96S53 571 aa35.4■■■■□ 3.26
LSM7-201ENST00000252622 FNBP4Q8N3X1 1017 aaPredicted RBP35.39■■■■□ 3.26
LSM7-201ENST00000252622 CABLES1Q8TDN4 633 aa35.39■■■■□ 3.26
LSM7-201ENST00000252622 SLC24A1O60721 1099 aa35.38■■■■□ 3.25
LSM7-201ENST00000252622 HAP1P54257 671 aaPredicted RBP35.38■■■■□ 3.25
LSM7-201ENST00000252622 USP6P35125 1406 aa35.37■■■■□ 3.25
LSM7-201ENST00000252622 CRYBG1Q9Y4K1 1723 aa35.36■■■■□ 3.25
LSM7-201ENST00000252622 PUS7Q96PZ0 661 aaKnown RBP35.35■■■■□ 3.25
LSM7-201ENST00000252622 USP21Q9UK80 565 aa35.32■■■■□ 3.24
LSM7-201ENST00000252622 PLEKHG5O94827 1062 aa35.31■■■■□ 3.24
LSM7-201ENST00000252622 SLIT2O94813 1529 aa35.31■■■■□ 3.24
LSM7-201ENST00000252622 AKAP12Q02952 1782 aa35.3■■■■□ 3.24
LSM7-201ENST00000252622 CPSF1Q10570 1443 aaKnown RBP35.3■■■■□ 3.24
LSM7-201ENST00000252622 SSH2Q76I76 1423 aa35.3■■■■□ 3.24
LSM7-201ENST00000252622 BCL9LQ86UU0 1499 aa35.29■■■■□ 3.24
LSM7-201ENST00000252622 ZNF692Q9BU19 519 aaPredicted RBP35.29■■■■□ 3.24
LSM7-201ENST00000252622 QTRT2Q9H974 415 aaKnown RBP35.28■■■■□ 3.24
LSM7-201ENST00000252622 ABTB2Q8N961 1025 aa35.27■■■■□ 3.24
LSM7-201ENST00000252622 PHRF1Q9P1Y6 1649 aaKnown RBP35.27■■■■□ 3.24
LSM7-201ENST00000252622 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.26■■■■□ 3.24
LSM7-201ENST00000252622 RXRBP28702 533 aa35.26■■■■□ 3.24
LSM7-201ENST00000252622 ATRNO75882 1429 aa35.25■■■■□ 3.23
LSM7-201ENST00000252622 TRPC5Q9UL62 973 aaPredicted RBP35.25■■■■□ 3.23
LSM7-201ENST00000252622 CDK12Q9NYV4 1490 aaPredicted RBP35.24■■■■□ 3.23
LSM7-201ENST00000252622 NRKQ7Z2Y5 1582 aa35.23■■■■□ 3.23
LSM7-201ENST00000252622 USP19O94966 1318 aa35.23■■■■□ 3.23
LSM7-201ENST00000252622 PLCH1Q4KWH8 1693 aa35.23■■■■□ 3.23
LSM7-201ENST00000252622 CD163L1Q9NR16 1453 aa35.22■■■■□ 3.23
LSM7-201ENST00000252622 RBM6P78332 1123 aaKnown RBP35.22■■■■□ 3.23
LSM7-201ENST00000252622 TMF1P82094 1093 aa35.22■■■■□ 3.23
LSM7-201ENST00000252622 NUTM2GQ5VZR2 741 aa35.22■■■■□ 3.23
LSM7-201ENST00000252622 MON2Q7Z3U7 1717 aa35.22■■■■□ 3.23
LSM7-201ENST00000252622 NWD2Q9ULI1 1742 aa35.22■■■■□ 3.23
LSM7-201ENST00000252622 NINLQ9Y2I6 1382 aa35.22■■■■□ 3.23
LSM7-201ENST00000252622 KTN1Q86UP2 1357 aaKnown RBP35.21■■■■□ 3.23
LSM7-201ENST00000252622 NLRP13Q86W25 1043 aa35.2■■■■□ 3.23
LSM7-201ENST00000252622 UNC5CLQ8IV45 518 aa35.2■■■■□ 3.23
LSM7-201ENST00000252622 COL14A1Q05707 1796 aaKnown RBP35.19■■■■□ 3.22
LSM7-201ENST00000252622 TTC21BQ7Z4L5 1316 aa35.19■■■■□ 3.22
LSM7-201ENST00000252622 TMC1Q8TDI8 760 aa35.19■■■■□ 3.22
LSM7-201ENST00000252622 PIK3C2AO00443 1686 aa35.18■■■■□ 3.22
LSM7-201ENST00000252622 FAM83GA6ND36 823 aa35.18■■■■□ 3.22
LSM7-201ENST00000252622 TTC21AQ8NDW8 1320 aa35.17■■■■□ 3.22
LSM7-201ENST00000252622 SLC12A5Q9H2X9 1139 aa35.17■■■■□ 3.22
LSM7-201ENST00000252622 HDGFL2Q7Z4V5 671 aaPredicted RBP35.15■■■■□ 3.22
LSM7-201ENST00000252622 TERF2IPQ9NYB0 399 aa35.14■■■■□ 3.22
LSM7-201ENST00000252622 SLIT3O75094 1523 aa35.13■■■■□ 3.21
LSM7-201ENST00000252622 CDCA8Q53HL2 280 aa35.13■■■■□ 3.21
LSM7-201ENST00000252622 PRDM11Q9NQV5 511 aa35.13■■■■□ 3.21
LSM7-201ENST00000252622 A0A1W2PP64 1363 aa35.13■■■■□ 3.21
LSM7-201ENST00000252622 KIAA0232Q92628 1395 aa35.13■■■■□ 3.21
LSM7-201ENST00000252622 NLRP6P59044 892 aa35.12■■■■□ 3.21
LSM7-201ENST00000252622 NRAPQ86VF7 1730 aa35.12■■■■□ 3.21
LSM7-201ENST00000252622 RGS12O14924 1447 aa35.11■■■■□ 3.21
LSM7-201ENST00000252622 CPDO75976 1380 aa35.11■■■■□ 3.21
LSM7-201ENST00000252622 EDC4Q6P2E9 1401 aaKnown RBP35.09■■■■□ 3.21
LSM7-201ENST00000252622 EIF4G2P78344 907 aaKnown RBP eCLIP35.09■■■■□ 3.21
LSM7-201ENST00000252622 GCP02774 474 aa35.08■■■■□ 3.21
LSM7-201ENST00000252622 GJD4Q96KN9 370 aaPredicted RBP35.08■■■■□ 3.21
LSM7-201ENST00000252622 BTG4Q9NY30 223 aa35.08■■■■□ 3.21
LSM7-201ENST00000252622 ZC3H6P61129 1189 aaKnown RBP35.07■■■■□ 3.2
LSM7-201ENST00000252622 VPS72Q15906 364 aa35.07■■■■□ 3.2
LSM7-201ENST00000252622 GLI3P10071 1580 aa35.05■■■■□ 3.2
LSM7-201ENST00000252622 USP54Q70EL1 1684 aa35.04■■■■□ 3.2
LSM7-201ENST00000252622 USP31Q70CQ4 1352 aa35.03■■■■□ 3.2
LSM7-201ENST00000252622 ANKRD36BQ8N2N9 1353 aa35.03■■■■□ 3.2
LSM7-201ENST00000252622 HSPA5P11021 654 aaKnown RBP35.02■■■■□ 3.2
LSM7-201ENST00000252622 CHRNA2Q15822 529 aa35.01■■■■□ 3.2
LSM7-201ENST00000252622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.01■■■■□ 3.2
LSM7-201ENST00000252622 LMO7Q8WWI1 1683 aa35■■■■□ 3.19
LSM7-201ENST00000252622 KCNH5Q8NCM2 988 aa34.98■■■■□ 3.19
LSM7-201ENST00000252622 NME9Q86XW9 330 aa34.97■■■■□ 3.19
LSM7-201ENST00000252622 MYOM1P52179 1685 aa34.96■■■■□ 3.19
LSM7-201ENST00000252622 CCDC9Q9Y3X0 531 aaKnown RBP34.95■■■■□ 3.19
LSM7-201ENST00000252622 NFAT5O94916 1531 aa34.95■■■■□ 3.19
LSM7-201ENST00000252622 CAMTA1Q9Y6Y1 1673 aa34.94■■■■□ 3.18
LSM7-201ENST00000252622 AATKQ6ZMQ8 1374 aa34.93■■■■□ 3.18
LSM7-201ENST00000252622 ZRANB1Q9UGI0 708 aa34.93■■■■□ 3.18
LSM7-201ENST00000252622 OVOS2A0A0J9YW53 1432 aa34.92■■■■□ 3.18
LSM7-201ENST00000252622 OVOS2Q6IE36 1432 aa34.92■■■■□ 3.18
LSM7-201ENST00000252622 SPATA31A5Q5VU36 1347 aa34.9■■■■□ 3.18
LSM7-201ENST00000252622 SPATA31A7Q8IWB4 1347 aa34.9■■■■□ 3.18
LSM7-201ENST00000252622 ONECUT3O60422 494 aaPredicted RBP34.88■■■■□ 3.17
LSM7-201ENST00000252622 ARHGEF25Q86VW2 580 aa34.88■■■■□ 3.17
LSM7-201ENST00000252622 COL5A2P05997 1499 aaPredicted RBP34.87■■■■□ 3.17
LSM7-201ENST00000252622 STRN4Q9NRL3 753 aa34.87■■■■□ 3.17
LSM7-201ENST00000252622 COL18A1P39060 1754 aa34.87■■■■□ 3.17
LSM7-201ENST00000252622 ABCC6O95255 1503 aa34.86■■■■□ 3.17
LSM7-201ENST00000252622 ZBTB7CA1YPR0 619 aa34.85■■■■□ 3.17
LSM7-201ENST00000252622 SOX12O15370 315 aa34.85■■■■□ 3.17
LSM7-201ENST00000252622 EVA1CP58658 441 aa34.84■■■■□ 3.17
LSM7-201ENST00000252622 SPATA31A1Q5TZJ5 1347 aa34.83■■■■□ 3.17
LSM7-201ENST00000252622 SEPT12Q8IYM1 358 aa34.81■■■■□ 3.16
LSM7-201ENST00000252622 FAM98CQ17RN3 349 aaKnown RBP34.79■■■■□ 3.16
LSM7-201ENST00000252622 COG3Q96JB2 828 aa34.79■■■■□ 3.16
LSM7-201ENST00000252622 LARP1Q6PKG0 1096 aaKnown RBP34.78■■■■□ 3.16
LSM7-201ENST00000252622 POLR3GLQ9BT43 218 aa34.78■■■■□ 3.16
LSM7-201ENST00000252622 THSD7AQ9UPZ6 1657 aa34.77■■■■□ 3.16
LSM7-201ENST00000252622 UPF1Q92900 1129 aaKnown RBP eCLIP34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms