RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SSH1Q8WYL5 1049 aa32.7■■■□□ 2.82
RAB40C-201ENST00000248139 CD163L1Q9NR16 1453 aa32.69■■■□□ 2.82
RAB40C-201ENST00000248139 MLECQ14165 292 aa32.69■■■□□ 2.82
RAB40C-201ENST00000248139 MVPQ14764 893 aaKnown RBP32.69■■■□□ 2.82
RAB40C-201ENST00000248139 DZIP1LQ8IYY4 767 aaKnown RBP32.68■■■□□ 2.82
RAB40C-201ENST00000248139 TMEM131LA2VDJ0 1609 aa32.68■■■□□ 2.82
RAB40C-201ENST00000248139 ZFYVE9O95405 1425 aa32.66■■■□□ 2.82
RAB40C-201ENST00000248139 TRIM27P14373 513 aa32.66■■■□□ 2.82
RAB40C-201ENST00000248139 PREX1Q8TCU6 1659 aa32.66■■■□□ 2.82
RAB40C-201ENST00000248139 DIAPH1O60610 1272 aaKnown RBP32.65■■■□□ 2.82
RAB40C-201ENST00000248139 FRAT2O75474 233 aaPredicted RBP32.65■■■□□ 2.82
RAB40C-201ENST00000248139 ATAD2Q6PL18 1390 aa32.65■■■□□ 2.82
RAB40C-201ENST00000248139 HDGFL2Q7Z4V5 671 aaPredicted RBP32.64■■■□□ 2.82
RAB40C-201ENST00000248139 FAM69CQ0P6D2 419 aa32.64■■■□□ 2.81
RAB40C-201ENST00000248139 RWDD1Q9H446 243 aaPredicted RBP32.64■■■□□ 2.81
RAB40C-201ENST00000248139 ADGRB2O60241 1585 aa32.63■■■□□ 2.81
RAB40C-201ENST00000248139 COL3A1P02461 1466 aaPredicted RBP32.63■■■□□ 2.81
RAB40C-201ENST00000248139 ITPRIPQ8IWB1 547 aa32.63■■■□□ 2.81
RAB40C-201ENST00000248139 NOB1Q9ULX3 412 aaKnown RBP32.63■■■□□ 2.81
RAB40C-201ENST00000248139 NLRP1Q9C000 1473 aa32.61■■■□□ 2.81
RAB40C-201ENST00000248139 IL27Q8NEV9 243 aa32.6■■■□□ 2.81
RAB40C-201ENST00000248139 HMOX1P09601 288 aa32.59■■■□□ 2.81
RAB40C-201ENST00000248139 THUMPD2Q9BTF0 503 aaKnown RBP32.58■■■□□ 2.81
RAB40C-201ENST00000248139 ALKQ9UM73 1620 aa32.57■■■□□ 2.8
RAB40C-201ENST00000248139 SLKQ9H2G2 1235 aaPredicted RBP32.56■■■□□ 2.8
RAB40C-201ENST00000248139 ZRANB1Q9UGI0 708 aa32.56■■■□□ 2.8
RAB40C-201ENST00000248139 PRKAR2BP31323 418 aa32.56■■■□□ 2.8
RAB40C-201ENST00000248139 TMEM57Q8N5G2 664 aa32.55■■■□□ 2.8
RAB40C-201ENST00000248139 NCKAP5LQ9HCH0 1330 aa32.55■■■□□ 2.8
RAB40C-201ENST00000248139 ATF7IPQ6VMQ6 1270 aa32.54■■■□□ 2.8
RAB40C-201ENST00000248139 POLKQ9UBT6 870 aa32.54■■■□□ 2.8
RAB40C-201ENST00000248139 VIRMAQ69YN4 1812 aaKnown RBP32.53■■■□□ 2.8
RAB40C-201ENST00000248139 PHACTR3Q96KR7 559 aa32.53■■■□□ 2.8
RAB40C-201ENST00000248139 GSE1Q14687 1217 aa32.53■■■□□ 2.8
RAB40C-201ENST00000248139 ARHGEF40Q8TER5 1519 aa32.52■■■□□ 2.8
RAB40C-201ENST00000248139 RTN4Q9NQC3 1192 aaKnown RBP32.52■■■□□ 2.8
RAB40C-201ENST00000248139 EMILIN1Q9Y6C2 1016 aa32.52■■■□□ 2.8
RAB40C-201ENST00000248139 AAMPQ13685 434 aa32.51■■■□□ 2.8
RAB40C-201ENST00000248139 NCBP3Q53F19 620 aaKnown RBP32.51■■■□□ 2.8
RAB40C-201ENST00000248139 ELL2O00472 640 aaPredicted RBP32.49■■■□□ 2.79
RAB40C-201ENST00000248139 NME9Q86XW9 330 aa32.48■■■□□ 2.79
RAB40C-201ENST00000248139 TSPOAP1O95153 1857 aa32.48■■■□□ 2.79
RAB40C-201ENST00000248139 SPRYD3Q8NCJ5 442 aa32.47■■■□□ 2.79
RAB40C-201ENST00000248139 CT47B1P0C2W7 299 aaPredicted RBP32.47■■■□□ 2.79
RAB40C-201ENST00000248139 RSPH6AQ9H0K4 717 aa32.47■■■□□ 2.79
RAB40C-201ENST00000248139 PNPLA6Q8IY17 1366 aa32.47■■■□□ 2.79
RAB40C-201ENST00000248139 TXNDC2Q86VQ3 553 aa32.46■■■□□ 2.79
RAB40C-201ENST00000248139 DDX19BQ9UMR2 479 aa32.45■■■□□ 2.79
RAB40C-201ENST00000248139 TBC1D32Q96NH3 1257 aa32.44■■■□□ 2.78
RAB40C-201ENST00000248139 FCHSD2O94868 740 aa32.44■■■□□ 2.78
RAB40C-201ENST00000248139 UPF2Q9HAU5 1272 aaKnown RBP32.44■■■□□ 2.78
RAB40C-201ENST00000248139 CLTCQ00610 1675 aaKnown RBP32.42■■■□□ 2.78
RAB40C-201ENST00000248139 IL16Q14005 1332 aa32.42■■■□□ 2.78
RAB40C-201ENST00000248139 MED14O60244 1454 aa32.42■■■□□ 2.78
RAB40C-201ENST00000248139 LRRC7Q96NW7 1537 aa32.41■■■□□ 2.78
RAB40C-201ENST00000248139 MFAP1P55081 439 aaKnown RBP32.41■■■□□ 2.78
RAB40C-201ENST00000248139 TSPYL6Q8N831 410 aa32.41■■■□□ 2.78
RAB40C-201ENST00000248139 ANKRD26Q9UPS8 1709 aa32.41■■■□□ 2.78
RAB40C-201ENST00000248139 RRS1Q15050 365 aaKnown RBP32.41■■■□□ 2.78
RAB40C-201ENST00000248139 BECN1Q14457 450 aa32.4■■■□□ 2.78
RAB40C-201ENST00000248139 ZBTB40Q9NUA8 1239 aa32.4■■■□□ 2.78
RAB40C-201ENST00000248139 RIMS2Q9UQ26 1411 aa32.39■■■□□ 2.78
RAB40C-201ENST00000248139 BRPF3Q9ULD4 1205 aa32.39■■■□□ 2.78
RAB40C-201ENST00000248139 A2ML1A8K2U0 1454 aa32.39■■■□□ 2.78
RAB40C-201ENST00000248139 TBC1D2Q9BYX2 928 aa32.38■■■□□ 2.77
RAB40C-201ENST00000248139 C1orf115Q9H7X2 142 aa32.38■■■□□ 2.77
RAB40C-201ENST00000248139 HDAC1Q13547 482 aaPredicted RBP32.37■■■□□ 2.77
RAB40C-201ENST00000248139 PNNQ9H307 717 aaKnown RBP32.37■■■□□ 2.77
RAB40C-201ENST00000248139 METP08581 1390 aa32.36■■■□□ 2.77
RAB40C-201ENST00000248139 LNPKQ9C0E8 428 aa32.35■■■□□ 2.77
RAB40C-201ENST00000248139 KIF20BQ96Q89 1820 aa32.35■■■□□ 2.77
RAB40C-201ENST00000248139 WASLO00401 505 aaPredicted RBP32.34■■■□□ 2.77
RAB40C-201ENST00000248139 FAM83GA6ND36 823 aa32.34■■■□□ 2.77
RAB40C-201ENST00000248139 NFE2L2Q16236 605 aa32.34■■■□□ 2.77
RAB40C-201ENST00000248139 KIF16BQ96L93 1317 aa32.33■■■□□ 2.77
RAB40C-201ENST00000248139 MAP2P11137 1827 aaKnown RBP32.33■■■□□ 2.77
RAB40C-201ENST00000248139 IPO8O15397 1037 aaKnown RBP32.33■■■□□ 2.77
RAB40C-201ENST00000248139 FAM135BQ49AJ0 1406 aa32.33■■■□□ 2.77
RAB40C-201ENST00000248139 NUTM2FA1L443 756 aa32.33■■■□□ 2.77
RAB40C-201ENST00000248139 DCTN1Q14203 1278 aa32.33■■■□□ 2.77
RAB40C-201ENST00000248139 PPIP5K1Q6PFW1 1433 aa32.32■■■□□ 2.76
RAB40C-201ENST00000248139 SMC5Q8IY18 1101 aa32.32■■■□□ 2.76
RAB40C-201ENST00000248139 IL13P35225 146 aa32.31■■■□□ 2.76
RAB40C-201ENST00000248139 NUDT16Q96DE0 195 aaKnown RBP32.31■■■□□ 2.76
RAB40C-201ENST00000248139 VAMP4O75379 141 aa32.3■■■□□ 2.76
RAB40C-201ENST00000248139 C22orf23Q9BZE7 217 aa32.29■■■□□ 2.76
RAB40C-201ENST00000248139 ANTXR1Q9H6X2 564 aa32.28■■■□□ 2.76
RAB40C-201ENST00000248139 MBIPQ9NS73 344 aa32.28■■■□□ 2.76
RAB40C-201ENST00000248139 ALDH1L2Q3SY69 923 aa32.27■■■□□ 2.76
RAB40C-201ENST00000248139 MRPL50Q8N5N7 158 aaKnown RBP32.25■■■□□ 2.75
RAB40C-201ENST00000248139 ATP7BP35670 1465 aa32.24■■■□□ 2.75
RAB40C-201ENST00000248139 C8orf58Q8NAV2 365 aa32.24■■■□□ 2.75
RAB40C-201ENST00000248139 COG3Q96JB2 828 aa32.23■■■□□ 2.75
RAB40C-201ENST00000248139 ZMYM3Q14202 1370 aa32.22■■■□□ 2.75
RAB40C-201ENST00000248139 CPSF1Q10570 1443 aaKnown RBP32.22■■■□□ 2.75
RAB40C-201ENST00000248139 ZBTB7BO15156 539 aaPredicted RBP32.22■■■□□ 2.75
RAB40C-201ENST00000248139 NUCB1Q02818 461 aa32.22■■■□□ 2.75
RAB40C-201ENST00000248139 CPS1P31327 1500 aa32.21■■■□□ 2.75
RAB40C-201ENST00000248139 SOX12O15370 315 aa32.21■■■□□ 2.75
RAB40C-201ENST00000248139 DIP2BQ9P265 1576 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms