RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 ABCC5O15440 1437 aa13.73□□□□□ -0.21
FAM78A-201ENST00000247295 NEK4P51957 841 aa13.73□□□□□ -0.21
FAM78A-201ENST00000247295 XPCQ01831 940 aaPredicted RBP13.73□□□□□ -0.21
FAM78A-201ENST00000247295 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
FAM78A-201ENST00000247295 WWC1Q8IX03 1113 aa13.73□□□□□ -0.21
FAM78A-201ENST00000247295 BICD2Q8TD16 824 aa13.73□□□□□ -0.21
FAM78A-201ENST00000247295 CLASRPQ8N2M8 674 aaKnown RBP13.72□□□□□ -0.21
FAM78A-201ENST00000247295 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
FAM78A-201ENST00000247295 GOLGA6L19H0YKK7 550 aa13.72□□□□□ -0.21
FAM78A-201ENST00000247295 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
FAM78A-201ENST00000247295 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
FAM78A-201ENST00000247295 CCDC30Q5VVM6 783 aa13.72□□□□□ -0.21
FAM78A-201ENST00000247295 GNAI3P08754 354 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 IFT57Q9NWB7 429 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 MCM4P33991 863 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 RNF20Q5VTR2 975 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 ERC2O15083 957 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 RAD21O60216 631 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 AKAP17AQ02040 695 aaKnown RBP13.71□□□□□ -0.21
FAM78A-201ENST00000247295 PDE4CQ08493 712 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 AAMPQ13685 434 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 HSP90AB4PQ58FF6 505 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.21
FAM78A-201ENST00000247295 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.21
FAM78A-201ENST00000247295 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
FAM78A-201ENST00000247295 MARCH6O60337 910 aa13.71□□□□□ -0.22
FAM78A-201ENST00000247295 DCTN1Q14203 1278 aa13.71□□□□□ -0.22
FAM78A-201ENST00000247295 VPS53Q5VIR6 699 aa13.71□□□□□ -0.22
FAM78A-201ENST00000247295 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
FAM78A-201ENST00000247295 CCDC39Q9UFE4 941 aa13.7□□□□□ -0.22
FAM78A-201ENST00000247295 NSD3Q9BZ95 1437 aa13.7□□□□□ -0.22
FAM78A-201ENST00000247295 ADGRF5Q8IZF2 1346 aa13.7□□□□□ -0.22
FAM78A-201ENST00000247295 NUCB2P80303 420 aa13.7□□□□□ -0.22
FAM78A-201ENST00000247295 KDM4AO75164 1064 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 SLFN5Q08AF3 891 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 MVPQ14764 893 aaKnown RBP13.69□□□□□ -0.22
FAM78A-201ENST00000247295 SYNE3Q6ZMZ3 975 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 PLEKHH2Q8IVE3 1493 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 WDR63Q8IWG1 891 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 FSD1Q9BTV5 496 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 RTEL1-TNFRSF6BF6WH68 1400 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
FAM78A-201ENST00000247295 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 TRDNQ13061 729 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
FAM78A-201ENST00000247295 CBX1P83916 185 aa13.68□□□□□ -0.22
FAM78A-201ENST00000247295 MAGI1Q96QZ7 1491 aaPredicted RBP13.68□□□□□ -0.22
FAM78A-201ENST00000247295 IQGAP2Q13576 1575 aa13.68□□□□□ -0.22
FAM78A-201ENST00000247295 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
FAM78A-201ENST00000247295 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
FAM78A-201ENST00000247295 LRRFIP1Q32MZ4 808 aaKnown RBP13.68□□□□□ -0.22
FAM78A-201ENST00000247295 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
FAM78A-201ENST00000247295 SIL1Q9H173 461 aa13.68□□□□□ -0.22
FAM78A-201ENST00000247295 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
FAM78A-201ENST00000247295 TEX35Q5T0J7 233 aa13.67□□□□□ -0.22
FAM78A-201ENST00000247295 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
FAM78A-201ENST00000247295 MAP4K4O95819 1239 aaPredicted RBP13.67□□□□□ -0.22
FAM78A-201ENST00000247295 GNAI2P04899 355 aa13.67□□□□□ -0.22
FAM78A-201ENST00000247295 FBXO31Q5XUX0 539 aaPredicted RBP13.67□□□□□ -0.22
FAM78A-201ENST00000247295 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
FAM78A-201ENST00000247295 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
FAM78A-201ENST00000247295 CAMSAP2Q08AD1 1489 aa13.67□□□□□ -0.22
FAM78A-201ENST00000247295 CCDC66A2RUB6 948 aa13.67□□□□□ -0.22
FAM78A-201ENST00000247295 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
FAM78A-201ENST00000247295 NOC3LQ8WTT2 800 aaKnown RBP13.67□□□□□ -0.22
FAM78A-201ENST00000247295 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
FAM78A-201ENST00000247295 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
FAM78A-201ENST00000247295 PLEKHO1Q53GL0 409 aaPredicted RBP13.66□□□□□ -0.22
FAM78A-201ENST00000247295 THEMISQ8N1K5 641 aaPredicted RBP13.66□□□□□ -0.22
FAM78A-201ENST00000247295 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
FAM78A-201ENST00000247295 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
FAM78A-201ENST00000247295 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
FAM78A-201ENST00000247295 MCM10Q7L590 875 aa13.66□□□□□ -0.22
FAM78A-201ENST00000247295 CCDC141Q6ZP82 1450 aa13.65□□□□□ -0.22
FAM78A-201ENST00000247295 FYB1O15117 783 aa13.65□□□□□ -0.22
FAM78A-201ENST00000247295 IDI1Q13907 227 aa13.65□□□□□ -0.22
FAM78A-201ENST00000247295 TRIM29Q14134 588 aa13.65□□□□□ -0.22
FAM78A-201ENST00000247295 GCC1Q96CN9 775 aa13.65□□□□□ -0.22
FAM78A-201ENST00000247295 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
FAM78A-201ENST00000247295 MYL6BP14649 208 aa13.65□□□□□ -0.22
FAM78A-201ENST00000247295 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
FAM78A-201ENST00000247295 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
FAM78A-201ENST00000247295 PTPN23Q9H3S7 1636 aa13.65□□□□□ -0.22
FAM78A-201ENST00000247295 RALYLQ86SE5 291 aaKnown RBP13.64□□□□□ -0.23
FAM78A-201ENST00000247295 ZSCAN30Q86W11 494 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 SSH1Q8WYL5 1049 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 NME9Q86XW9 330 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
FAM78A-201ENST00000247295 FBLN1P23142 703 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
FAM78A-201ENST00000247295 DHX16O60231 1041 aaKnown RBP13.64□□□□□ -0.23
FAM78A-201ENST00000247295 FCHSD2O94868 740 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 EMILIN1Q9Y6C2 1016 aa13.64□□□□□ -0.23
FAM78A-201ENST00000247295 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 ERICH4A6NGS2 130 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms