RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 SYCP1Q15431 976 aa8.79□□□□□ -1
SSR1-201ENST00000244763 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
SSR1-201ENST00000244763 CDC45O75419 566 aa8.79□□□□□ -1
SSR1-201ENST00000244763 JMYQ8N9B5 988 aa8.79□□□□□ -1
SSR1-201ENST00000244763 CABP2Q9NPB3 220 aa8.79□□□□□ -1
SSR1-201ENST00000244763 FYB1O15117 783 aa8.79□□□□□ -1
SSR1-201ENST00000244763 SMARCE1Q969G3 411 aa8.79□□□□□ -1
SSR1-201ENST00000244763 LUC7LQ9NQ29 371 aaKnown RBP8.79□□□□□ -1
SSR1-201ENST00000244763 SURF6O75683 361 aaKnown RBP8.79□□□□□ -1
SSR1-201ENST00000244763 TXLNBQ8N3L3 684 aa8.79□□□□□ -1
SSR1-201ENST00000244763 KCNH5Q8NCM2 988 aa8.79□□□□□ -1
SSR1-201ENST00000244763 TMEM132AQ24JP5 1023 aa8.79□□□□□ -1
SSR1-201ENST00000244763 FSD1Q9BTV5 496 aa8.78□□□□□ -1
SSR1-201ENST00000244763 ZNF428Q96B54 188 aa8.78□□□□□ -1
SSR1-201ENST00000244763 SRCIN1Q9C0H9 1055 aa8.78□□□□□ -1
SSR1-201ENST00000244763 ARGLU1Q9NWB6 273 aaPredicted RBP8.78□□□□□ -1
SSR1-201ENST00000244763 RAD54L2Q9Y4B4 1467 aa8.78□□□□□ -1
SSR1-201ENST00000244763 NAP1L1P55209 391 aaKnown RBP8.78□□□□□ -1
SSR1-201ENST00000244763 TTC39AQ5SRH9 613 aa8.78□□□□□ -1
SSR1-201ENST00000244763 PRG4Q92954 1404 aaPredicted RBP8.78□□□□□ -1
SSR1-201ENST00000244763 CCDC57Q2TAC2 916 aa8.78□□□□□ -1
SSR1-201ENST00000244763 SDF4Q9BRK5 362 aa8.78□□□□□ -1
SSR1-201ENST00000244763 ERICH3Q5RHP9 1530 aa8.78□□□□□ -1
SSR1-201ENST00000244763 SAMD1Q6SPF0 538 aaPredicted RBP8.78□□□□□ -1
SSR1-201ENST00000244763 ZNF287Q9HBT7 754 aa8.78□□□□□ -1
SSR1-201ENST00000244763 STRN4Q9NRL3 753 aa8.78□□□□□ -1
SSR1-201ENST00000244763 ZNF652Q9Y2D9 606 aa8.78□□□□□ -1
SSR1-201ENST00000244763 DNAI2Q9GZS0 605 aa8.78□□□□□ -1
SSR1-201ENST00000244763 MAGEC2Q9UBF1 373 aaPredicted RBP8.78□□□□□ -1
SSR1-201ENST00000244763 ZFYVE27Q5T4F4 411 aa8.78□□□□□ -1
SSR1-201ENST00000244763 ZNF396Q96N95 335 aaPredicted RBP8.78□□□□□ -1
SSR1-201ENST00000244763 RRP12Q5JTH9 1297 aaKnown RBP8.77□□□□□ -1
SSR1-201ENST00000244763 FOXD4L6Q3SYB3 417 aaPredicted RBP8.77□□□□□ -1.01
SSR1-201ENST00000244763 FOXD4L3Q6VB84 417 aaPredicted RBP8.77□□□□□ -1.01
SSR1-201ENST00000244763 MPHOSPH8Q99549 860 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 TRIM21P19474 475 aaKnown RBP8.77□□□□□ -1.01
SSR1-201ENST00000244763 ERCC4Q92889 916 aaPredicted RBP8.77□□□□□ -1.01
SSR1-201ENST00000244763 LNPKQ9C0E8 428 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 NCOA2Q15596 1464 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 HSP90AB2PQ58FF8 381 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 TRIM22Q8IYM9 498 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 STARD3NLO95772 234 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 PRAM1Q96QH2 718 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 AQRO60306 1485 aaKnown RBP eCLIP8.77□□□□□ -1.017e-15■■■■□ 23.4
SSR1-201ENST00000244763 CCP110O43303 1012 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 EXOC6Q8TAG9 804 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 EHBP1L1Q8N3D4 1523 aa8.77□□□□□ -1.01
SSR1-201ENST00000244763 DACH1Q9UI36 760 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 HDGFL1Q5TGJ6 251 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 AFAP1Q8N556 730 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 HECW1Q76N89 1606 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 DESP17661 470 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 TMEM132EQ6IEE7 984 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 C22orf23Q9BZE7 217 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 STIM1Q13586 685 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 ANKRD30BQ9BXX2 1392 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 TWISTNBQ3B726 338 aaPredicted RBP8.76□□□□□ -1.01
SSR1-201ENST00000244763 RTEL1-TNFRSF6BF6WH68 1400 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 KINO60870 393 aaKnown RBP8.76□□□□□ -1.01
SSR1-201ENST00000244763 GSE1Q14687 1217 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 CDK19Q9BWU1 502 aa8.76□□□□□ -1.01
SSR1-201ENST00000244763 PDE3AQ14432 1141 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 SUPT6HQ7KZ85 1726 aaKnown RBP8.75□□□□□ -1.01
SSR1-201ENST00000244763 MBD3O95983 291 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 SOGA3Q5TF21 947 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 DAPK1P53355 1430 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 CTNNA3Q9UI47 895 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 WDR63Q8IWG1 891 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 PRDM11Q9NQV5 511 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 PAF1Q8N7H5 531 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 DMRT2Q9Y5R5 561 aa8.75□□□□□ -1.01
SSR1-201ENST00000244763 CDKL5O76039 1030 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 DCTN1Q14203 1278 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 AEBP1Q8IUX7 1158 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 ZNF592Q92610 1267 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 HSP90B2PQ58FF3 399 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 KRT18P05783 430 aaKnown RBP8.74□□□□□ -1.01
SSR1-201ENST00000244763 PRKAR2BP31323 418 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
SSR1-201ENST00000244763 TMOD2Q9NZR1 351 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 RUSC2Q8N2Y8 1516 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 CFAP70Q5T0N1 1121 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 BMP2KQ9NSY1 1161 aaPredicted RBP8.74□□□□□ -1.01
SSR1-201ENST00000244763 MNS1Q8NEH6 495 aa8.74□□□□□ -1.01
SSR1-201ENST00000244763 DDX54Q8TDD1 881 aaKnown RBP8.74□□□□□ -1.01
SSR1-201ENST00000244763 NOL7Q9UMY1 257 aaKnown RBP8.74□□□□□ -1.01
SSR1-201ENST00000244763 ZRSR2Q15696 482 aaKnown RBP8.74□□□□□ -1.01
SSR1-201ENST00000244763 ZNHIT6Q9NWK9 470 aaKnown RBP8.74□□□□□ -1.01
SSR1-201ENST00000244763 TCP11L2Q8N4U5 519 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 C9orf84Q5VXU9 1444 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 CCDC69A6NI79 296 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 PPP1R1BQ9UD71 204 aaPredicted RBP8.73□□□□□ -1.01
SSR1-201ENST00000244763 LRRCC1Q9C099 1032 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 KIAA1107Q9UPP5 1409 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 ZNF644Q9H582 1327 aaPredicted RBP8.73□□□□□ -1.01
SSR1-201ENST00000244763 ERLIN2O94905 339 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 KRT32Q14532 448 aa8.73□□□□□ -1.01
SSR1-201ENST00000244763 DNAJC2Q99543 621 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms