RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 PHLPP1O60346 1717 aa27.7■■■□□ 2.02
SNRPA-201ENST00000243563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.7■■■□□ 2.02
SNRPA-201ENST00000243563 SCAF1Q9H7N4 1312 aaKnown RBP27.69■■■□□ 2.02
SNRPA-201ENST00000243563 PSME1Q06323 249 aa27.69■■■□□ 2.02
SNRPA-201ENST00000243563 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
SNRPA-201ENST00000243563 TTC21BQ7Z4L5 1316 aa27.69■■■□□ 2.02
SNRPA-201ENST00000243563 ANKRD26Q9UPS8 1709 aa27.69■■■□□ 2.02
SNRPA-201ENST00000243563 NPHP3Q7Z494 1330 aa27.68■■■□□ 2.02
SNRPA-201ENST00000243563 COL16A1Q07092 1604 aaPredicted RBP27.67■■■□□ 2.02
SNRPA-201ENST00000243563 AMER1Q5JTC6 1135 aaPredicted RBP27.67■■■□□ 2.02
SNRPA-201ENST00000243563 ZRANB1Q9UGI0 708 aa27.67■■■□□ 2.02
SNRPA-201ENST00000243563 CNGB1Q14028 1251 aaPredicted RBP27.66■■■□□ 2.02
SNRPA-201ENST00000243563 NME9Q86XW9 330 aa27.66■■■□□ 2.02
SNRPA-201ENST00000243563 KNSTRNQ9Y448 316 aa27.65■■■□□ 2.02
SNRPA-201ENST00000243563 SOS2Q07890 1332 aaPredicted RBP27.65■■■□□ 2.02
SNRPA-201ENST00000243563 USP54Q70EL1 1684 aa27.63■■■□□ 2.01
SNRPA-201ENST00000243563 FYB1O15117 783 aa27.63■■■□□ 2.01
SNRPA-201ENST00000243563 PAK3O75914 559 aaPredicted RBP27.62■■■□□ 2.01
SNRPA-201ENST00000243563 CC2D1BQ5T0F9 858 aaKnown RBP27.61■■■□□ 2.01
SNRPA-201ENST00000243563 CRYBG1Q9Y4K1 1723 aa27.6■■■□□ 2.01
SNRPA-201ENST00000243563 DIEXFQ68CQ4 756 aaKnown RBP27.6■■■□□ 2.01
SNRPA-201ENST00000243563 GGNBP2Q9H3C7 697 aa27.6■■■□□ 2.01
SNRPA-201ENST00000243563 TNS3Q68CZ2 1445 aa27.6■■■□□ 2.01
SNRPA-201ENST00000243563 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
SNRPA-201ENST00000243563 CGNL1Q0VF96 1302 aa27.6■■■□□ 2.01
SNRPA-201ENST00000243563 NUTM2GQ5VZR2 741 aa27.59■■■□□ 2.01
SNRPA-201ENST00000243563 BRD4O60885 1362 aaPredicted RBP27.59■■■□□ 2.01
SNRPA-201ENST00000243563 TTC21AQ8NDW8 1320 aa27.59■■■□□ 2.01
SNRPA-201ENST00000243563 OVOS2A0A0J9YW53 1432 aa27.58■■■□□ 2
SNRPA-201ENST00000243563 OVOS2Q6IE36 1432 aa27.58■■■□□ 2
SNRPA-201ENST00000243563 SPATA31A3Q5VYP0 1347 aa27.57■■■□□ 2
SNRPA-201ENST00000243563 MED1Q15648 1581 aaPredicted RBP27.56■■■□□ 2
SNRPA-201ENST00000243563 NPC1L1Q9UHC9 1359 aa27.56■■■□□ 2
SNRPA-201ENST00000243563 ABCA3Q99758 1704 aa27.55■■■□□ 2
SNRPA-201ENST00000243563 ABTB2Q8N961 1025 aa27.54■■■□□ 2
SNRPA-201ENST00000243563 PHRF1Q9P1Y6 1649 aaKnown RBP27.54■■■□□ 2
SNRPA-201ENST00000243563 LMOD2Q6P5Q4 547 aa27.53■■■□□ 2
SNRPA-201ENST00000243563 NSD2O96028 1365 aa27.52■■■□□ 2
SNRPA-201ENST00000243563 USP31Q70CQ4 1352 aa27.52■■■□□ 2
SNRPA-201ENST00000243563 PLEKHG5O94827 1062 aa27.51■■□□□ 1.99
SNRPA-201ENST00000243563 PARD3Q8TEW0 1356 aa27.5■■□□□ 1.99
SNRPA-201ENST00000243563 COL22A1Q8NFW1 1626 aaPredicted RBP27.49■■□□□ 1.99
SNRPA-201ENST00000243563 FBLN1P23142 703 aa27.49■■□□□ 1.99
SNRPA-201ENST00000243563 NLRP6P59044 892 aa27.49■■□□□ 1.99
SNRPA-201ENST00000243563 SLIT3O75094 1523 aa27.49■■□□□ 1.99
SNRPA-201ENST00000243563 HSPA1LP34931 641 aa27.48■■□□□ 1.99
SNRPA-201ENST00000243563 PRKRIP1Q9H875 184 aaPredicted RBP27.48■■□□□ 1.99
SNRPA-201ENST00000243563 MAP2P11137 1827 aaKnown RBP27.47■■□□□ 1.99
SNRPA-201ENST00000243563 TNNT2P45379 298 aaPredicted RBP27.46■■□□□ 1.99
SNRPA-201ENST00000243563 CABLES1Q8TDN4 633 aa27.46■■□□□ 1.99
SNRPA-201ENST00000243563 COG3Q96JB2 828 aa27.46■■□□□ 1.99
SNRPA-201ENST00000243563 SHPRHQ149N8 1683 aa27.46■■□□□ 1.99
SNRPA-201ENST00000243563 NFAT5O94916 1531 aa27.46■■□□□ 1.99
SNRPA-201ENST00000243563 USP19O94966 1318 aa27.46■■□□□ 1.99
SNRPA-201ENST00000243563 ARHGEF10O15013 1369 aa27.46■■□□□ 1.99
SNRPA-201ENST00000243563 PNPLA6Q8IY17 1366 aa27.46■■□□□ 1.99
SNRPA-201ENST00000243563 MORC1Q86VD1 984 aa27.45■■□□□ 1.99
SNRPA-201ENST00000243563 LRRC59Q96AG4 307 aaKnown RBP27.45■■□□□ 1.98
SNRPA-201ENST00000243563 LTN1O94822 1766 aa27.44■■□□□ 1.98
SNRPA-201ENST00000243563 SOX12O15370 315 aa27.43■■□□□ 1.98
SNRPA-201ENST00000243563 NLRP13Q86W25 1043 aa27.42■■□□□ 1.98
SNRPA-201ENST00000243563 PEAK1Q9H792 1746 aa27.41■■□□□ 1.98
SNRPA-201ENST00000243563 ANP32CO43423 234 aa27.41■■□□□ 1.98
SNRPA-201ENST00000243563 MIER1Q8N108 512 aa27.38■■□□□ 1.97
SNRPA-201ENST00000243563 PPP2R1AP30153 589 aa27.37■■□□□ 1.97
SNRPA-201ENST00000243563 RALBP1Q15311 655 aa27.37■■□□□ 1.97
SNRPA-201ENST00000243563 FBXO41Q8TF61 875 aa27.37■■□□□ 1.97
SNRPA-201ENST00000243563 GCP02774 474 aa27.36■■□□□ 1.97
SNRPA-201ENST00000243563 RRS1Q15050 365 aaKnown RBP27.36■■□□□ 1.97
SNRPA-201ENST00000243563 EMILIN1Q9Y6C2 1016 aa27.34■■□□□ 1.97
SNRPA-201ENST00000243563 RGPD5Q99666 1765 aa27.33■■□□□ 1.97
SNRPA-201ENST00000243563 AATKQ6ZMQ8 1374 aa27.33■■□□□ 1.97
SNRPA-201ENST00000243563 JCADQ9P266 1359 aa27.33■■□□□ 1.97
SNRPA-201ENST00000243563 CCDC184Q52MB2 194 aa27.33■■□□□ 1.97
SNRPA-201ENST00000243563 MYBBP1AQ9BQG0 1328 aaKnown RBP27.32■■□□□ 1.96
SNRPA-201ENST00000243563 COL18A1P39060 1754 aa27.32■■□□□ 1.96
SNRPA-201ENST00000243563 POLKQ9UBT6 870 aa27.32■■□□□ 1.96
SNRPA-201ENST00000243563 SMG6Q86US8 1419 aaKnown RBP27.31■■□□□ 1.96
SNRPA-201ENST00000243563 MAP3K19Q56UN5 1328 aa27.31■■□□□ 1.96
SNRPA-201ENST00000243563 ZC3H6P61129 1189 aaKnown RBP27.3■■□□□ 1.96
SNRPA-201ENST00000243563 LRP6O75581 1613 aa27.28■■□□□ 1.96
SNRPA-201ENST00000243563 KCNH5Q8NCM2 988 aa27.28■■□□□ 1.96
SNRPA-201ENST00000243563 MTHFSP49914 203 aa27.27■■□□□ 1.96
SNRPA-201ENST00000243563 KIAA0232Q92628 1395 aa27.27■■□□□ 1.96
SNRPA-201ENST00000243563 ARHGEF25Q86VW2 580 aa27.27■■□□□ 1.96
SNRPA-201ENST00000243563 ZBTB7CA1YPR0 619 aa27.26■■□□□ 1.95
SNRPA-201ENST00000243563 LMO7Q8WWI1 1683 aa27.25■■□□□ 1.95
SNRPA-201ENST00000243563 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
SNRPA-201ENST00000243563 NUTM2BA6NNL0 878 aaPredicted RBP27.25■■□□□ 1.95
SNRPA-201ENST00000243563 NUTM2EB1AL46 878 aaPredicted RBP27.25■■□□□ 1.95
SNRPA-201ENST00000243563 NUTM2AQ8IVF1 878 aaPredicted RBP27.25■■□□□ 1.95
SNRPA-201ENST00000243563 CDK12Q9NYV4 1490 aaPredicted RBP27.24■■□□□ 1.95
SNRPA-201ENST00000243563 PPM1GO15355 546 aaPredicted RBP27.23■■□□□ 1.95
SNRPA-201ENST00000243563 CPDO75976 1380 aa27.23■■□□□ 1.95
SNRPA-201ENST00000243563 HAP1P54257 671 aaPredicted RBP27.23■■□□□ 1.95
SNRPA-201ENST00000243563 CHRNA2Q15822 529 aa27.23■■□□□ 1.95
SNRPA-201ENST00000243563 PLCH1Q4KWH8 1693 aa27.22■■□□□ 1.95
SNRPA-201ENST00000243563 RGPD2P0DJD1 1756 aa27.2■■□□□ 1.95
SNRPA-201ENST00000243563 ADAMTS2O95450 1211 aa27.19■■□□□ 1.94
SNRPA-201ENST00000243563 AXIN2Q9Y2T1 843 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms