RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 USP54Q70EL1 1684 aa14.97□□□□□ -0.01
PFDN5-201ENST00000243040 MEX3CQ5U5Q3 659 aaKnown RBP14.97□□□□□ -0.01
PFDN5-201ENST00000243040 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
PFDN5-201ENST00000243040 CPSF1Q10570 1443 aaKnown RBP14.97□□□□□ -0.01
PFDN5-201ENST00000243040 SSH2Q76I76 1423 aa14.97□□□□□ -0.01
PFDN5-201ENST00000243040 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
PFDN5-201ENST00000243040 NINLQ9Y2I6 1382 aa14.97□□□□□ -0.01
PFDN5-201ENST00000243040 MYOM1P52179 1685 aa14.97□□□□□ -0.01
PFDN5-201ENST00000243040 PLCH1Q4KWH8 1693 aa14.97□□□□□ -0.01
PFDN5-201ENST00000243040 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
PFDN5-201ENST00000243040 COL14A1Q05707 1796 aaKnown RBP14.93□□□□□ -0.02
PFDN5-201ENST00000243040 NRAPQ86VF7 1730 aa14.93□□□□□ -0.02
PFDN5-201ENST00000243040 TMF1P82094 1093 aa14.93□□□□□ -0.02
PFDN5-201ENST00000243040 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
PFDN5-201ENST00000243040 AFF2P51816 1311 aa14.92□□□□□ -0.02
PFDN5-201ENST00000243040 SLIT3O75094 1523 aa14.92□□□□□ -0.02
PFDN5-201ENST00000243040 SLIT2O94813 1529 aa14.92□□□□□ -0.02
PFDN5-201ENST00000243040 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
PFDN5-201ENST00000243040 ADAMTS2O95450 1211 aa14.92□□□□□ -0.02
PFDN5-201ENST00000243040 ZNF772Q68DY9 489 aaPredicted RBP14.92□□□□□ -0.02
PFDN5-201ENST00000243040 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
PFDN5-201ENST00000243040 C8orf37Q96NL8 207 aa14.92□□□□□ -0.02
PFDN5-201ENST00000243040 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
PFDN5-201ENST00000243040 USP19O94966 1318 aa14.91□□□□□ -0.02
PFDN5-201ENST00000243040 A0A1W2PP64 1363 aa14.9□□□□□ -0.02
PFDN5-201ENST00000243040 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
PFDN5-201ENST00000243040 POTEAQ6S8J7 498 aa14.9□□□□□ -0.02
PFDN5-201ENST00000243040 ILDR2Q71H61 639 aa14.9□□□□□ -0.02
PFDN5-201ENST00000243040 FNBP4Q8N3X1 1017 aaPredicted RBP14.9□□□□□ -0.02
PFDN5-201ENST00000243040 CABLES1Q8TDN4 633 aa14.9□□□□□ -0.02
PFDN5-201ENST00000243040 TTC21AQ8NDW8 1320 aa14.9□□□□□ -0.02
PFDN5-201ENST00000243040 CDCA8Q53HL2 280 aa14.89□□□□□ -0.03
PFDN5-201ENST00000243040 EDC4Q6P2E9 1401 aaKnown RBP14.89□□□□□ -0.03
PFDN5-201ENST00000243040 BCL9LQ86UU0 1499 aa14.89□□□□□ -0.03
PFDN5-201ENST00000243040 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
PFDN5-201ENST00000243040 ABTB2Q8N961 1025 aa14.88□□□□□ -0.03
PFDN5-201ENST00000243040 NGLY1Q96IV0 654 aa14.88□□□□□ -0.03
PFDN5-201ENST00000243040 TTC21BQ7Z4L5 1316 aa14.88□□□□□ -0.03
PFDN5-201ENST00000243040 LMO7Q8WWI1 1683 aa14.87□□□□□ -0.03
PFDN5-201ENST00000243040 ANKRD36BQ8N2N9 1353 aa14.87□□□□□ -0.03
PFDN5-201ENST00000243040 ATRNO75882 1429 aa14.87□□□□□ -0.03
PFDN5-201ENST00000243040 HSPA5P11021 654 aaKnown RBP14.87□□□□□ -0.03
PFDN5-201ENST00000243040 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
PFDN5-201ENST00000243040 TMC1Q8TDI8 760 aa14.87□□□□□ -0.03
PFDN5-201ENST00000243040 SLC12A5Q9H2X9 1139 aa14.87□□□□□ -0.03
PFDN5-201ENST00000243040 CDK12Q9NYV4 1490 aaPredicted RBP14.87□□□□□ -0.03
PFDN5-201ENST00000243040 NLRP13Q86W25 1043 aa14.86□□□□□ -0.03
PFDN5-201ENST00000243040 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
PFDN5-201ENST00000243040 KIF20BQ96Q89 1820 aa14.86□□□□□ -0.03
PFDN5-201ENST00000243040 USP21Q9UK80 565 aa14.85□□□□□ -0.03
PFDN5-201ENST00000243040 CPDO75976 1380 aa14.85□□□□□ -0.03
PFDN5-201ENST00000243040 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
PFDN5-201ENST00000243040 NFAT5O94916 1531 aa14.84□□□□□ -0.03
PFDN5-201ENST00000243040 NUTM2GQ5VZR2 741 aa14.84□□□□□ -0.03
PFDN5-201ENST00000243040 COL18A1P39060 1754 aa14.83□□□□□ -0.03
PFDN5-201ENST00000243040 GLI3P10071 1580 aa14.83□□□□□ -0.04
PFDN5-201ENST00000243040 KIAA0232Q92628 1395 aa14.83□□□□□ -0.04
PFDN5-201ENST00000243040 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.04
PFDN5-201ENST00000243040 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.04
PFDN5-201ENST00000243040 ABCC6O95255 1503 aa14.82□□□□□ -0.04
PFDN5-201ENST00000243040 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
PFDN5-201ENST00000243040 NLRP6P59044 892 aa14.82□□□□□ -0.04
PFDN5-201ENST00000243040 UNC5CLQ8IV45 518 aa14.82□□□□□ -0.04
PFDN5-201ENST00000243040 TRPC5Q9UL62 973 aaPredicted RBP14.82□□□□□ -0.04
PFDN5-201ENST00000243040 LTN1O94822 1766 aa14.82□□□□□ -0.04
PFDN5-201ENST00000243040 FAM83GA6ND36 823 aa14.81□□□□□ -0.04
PFDN5-201ENST00000243040 GCP02774 474 aa14.81□□□□□ -0.04
PFDN5-201ENST00000243040 QTRT2Q9H974 415 aaKnown RBP14.81□□□□□ -0.04
PFDN5-201ENST00000243040 RXRBP28702 533 aa14.8□□□□□ -0.04
PFDN5-201ENST00000243040 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
PFDN5-201ENST00000243040 PRDM11Q9NQV5 511 aa14.8□□□□□ -0.04
PFDN5-201ENST00000243040 RGS12O14924 1447 aa14.8□□□□□ -0.04
PFDN5-201ENST00000243040 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
PFDN5-201ENST00000243040 RGPD5Q99666 1765 aa14.79□□□□□ -0.04
PFDN5-201ENST00000243040 CAMTA1Q9Y6Y1 1673 aa14.79□□□□□ -0.04
PFDN5-201ENST00000243040 NME9Q86XW9 330 aa14.78□□□□□ -0.04
PFDN5-201ENST00000243040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
PFDN5-201ENST00000243040 KCNH5Q8NCM2 988 aa14.78□□□□□ -0.04
PFDN5-201ENST00000243040 ZC3H6P61129 1189 aaKnown RBP14.77□□□□□ -0.05
PFDN5-201ENST00000243040 VPS72Q15906 364 aa14.77□□□□□ -0.05
PFDN5-201ENST00000243040 BTG4Q9NY30 223 aa14.77□□□□□ -0.05
PFDN5-201ENST00000243040 COL5A2P05997 1499 aaPredicted RBP14.76□□□□□ -0.05
PFDN5-201ENST00000243040 NSD3Q9BZ95 1437 aa14.76□□□□□ -0.05
PFDN5-201ENST00000243040 AATKQ6ZMQ8 1374 aa14.76□□□□□ -0.05
PFDN5-201ENST00000243040 GJD4Q96KN9 370 aaPredicted RBP14.76□□□□□ -0.05
PFDN5-201ENST00000243040 BRWD3Q6RI45 1802 aa14.76□□□□□ -0.05
PFDN5-201ENST00000243040 WNK3Q9BYP7 1800 aa14.76□□□□□ -0.05
PFDN5-201ENST00000243040 SOCS7O14512 581 aa14.75□□□□□ -0.05
PFDN5-201ENST00000243040 CHRNA2Q15822 529 aa14.75□□□□□ -0.05
PFDN5-201ENST00000243040 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
PFDN5-201ENST00000243040 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
PFDN5-201ENST00000243040 C11orf95C9JLR9 678 aaPredicted RBP14.74□□□□□ -0.05
PFDN5-201ENST00000243040 ARHGEF25Q86VW2 580 aa14.74□□□□□ -0.05
PFDN5-201ENST00000243040 KIF7Q2M1P5 1343 aa14.73□□□□□ -0.05
PFDN5-201ENST00000243040 FAM208AQ9UK61 1670 aaKnown RBP14.73□□□□□ -0.05
PFDN5-201ENST00000243040 CARD14Q9BXL6 1004 aa14.72□□□□□ -0.05
PFDN5-201ENST00000243040 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.05
PFDN5-201ENST00000243040 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.05
PFDN5-201ENST00000243040 FYB1O15117 783 aa14.71□□□□□ -0.05
PFDN5-201ENST00000243040 COG3Q96JB2 828 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms