RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CCDC18Q5T9S5 1454 aa15.75■□□□□ 0.11
NEK9-201ENST00000238616 FAM193AP78312 1265 aa15.74■□□□□ 0.11
NEK9-201ENST00000238616 CLASRPQ8N2M8 674 aaKnown RBP15.74■□□□□ 0.11
NEK9-201ENST00000238616 ABTB2Q8N961 1025 aa15.74■□□□□ 0.11
NEK9-201ENST00000238616 MYBBP1AQ9BQG0 1328 aaKnown RBP15.74■□□□□ 0.11
NEK9-201ENST00000238616 PDE4AP27815 886 aa15.74■□□□□ 0.11
NEK9-201ENST00000238616 PSMA5P28066 241 aa15.74■□□□□ 0.11
NEK9-201ENST00000238616 CWC15Q9P013 229 aaKnown RBP15.74■□□□□ 0.11
NEK9-201ENST00000238616 CCDC181Q5TID7 509 aa15.73■□□□□ 0.11
NEK9-201ENST00000238616 ZNHIT6Q9NWK9 470 aaKnown RBP15.73■□□□□ 0.11
NEK9-201ENST00000238616 STK3Q13188 491 aa15.73■□□□□ 0.11
NEK9-201ENST00000238616 APAF1O14727 1248 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 VGFO15240 615 aaPredicted RBP15.72■□□□□ 0.11
NEK9-201ENST00000238616 ERC1Q8IUD2 1116 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 L3MBTL2Q969R5 705 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 ZNF76P36508 570 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 ERCC4Q92889 916 aaPredicted RBP15.72■□□□□ 0.11
NEK9-201ENST00000238616 SSBP05455 408 aaKnown RBP eCLIP15.72■□□□□ 0.11
NEK9-201ENST00000238616 DESP17661 470 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 DZIP1LQ8IYY4 767 aaKnown RBP15.72■□□□□ 0.11
NEK9-201ENST00000238616 TTC16Q8NEE8 873 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 MYL6BP14649 208 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
NEK9-201ENST00000238616 NUP133Q8WUM0 1156 aa15.72■□□□□ 0.11
NEK9-201ENST00000238616 SIL1Q9H173 461 aa15.71■□□□□ 0.11
NEK9-201ENST00000238616 MAP4K4O95819 1239 aaPredicted RBP15.71■□□□□ 0.11
NEK9-201ENST00000238616 TRIM21P19474 475 aaKnown RBP15.71■□□□□ 0.11
NEK9-201ENST00000238616 EZRP15311 586 aaKnown RBP15.71■□□□□ 0.11
NEK9-201ENST00000238616 ANAPC15P60006 121 aa15.71■□□□□ 0.11
NEK9-201ENST00000238616 EXOC6Q8TAG9 804 aa15.71■□□□□ 0.11
NEK9-201ENST00000238616 CA8P35219 290 aa15.7■□□□□ 0.1
NEK9-201ENST00000238616 SERPINC1P01008 464 aa15.7■□□□□ 0.1
NEK9-201ENST00000238616 USP5P45974 858 aa15.7■□□□□ 0.1
NEK9-201ENST00000238616 LEKR1Q6ZMV7 388 aa15.7■□□□□ 0.1
NEK9-201ENST00000238616 GNL3LQ9NVN8 582 aaKnown RBP15.7■□□□□ 0.1
NEK9-201ENST00000238616 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.7■□□□□ 0.1
NEK9-201ENST00000238616 ESCO1Q5FWF5 840 aa15.7■□□□□ 0.1
NEK9-201ENST00000238616 NASPP49321 788 aaPredicted RBP15.7■□□□□ 0.1
NEK9-201ENST00000238616 LRRFIP2Q9Y608 721 aaKnown RBP15.7■□□□□ 0.1
NEK9-201ENST00000238616 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
NEK9-201ENST00000238616 CCDC69A6NI79 296 aa15.69■□□□□ 0.1
NEK9-201ENST00000238616 TAF3Q5VWG9 929 aa15.69■□□□□ 0.1
NEK9-201ENST00000238616 FAM43AQ8N2R8 423 aa15.69■□□□□ 0.1
NEK9-201ENST00000238616 NACADO15069 1562 aa15.69■□□□□ 0.1
NEK9-201ENST00000238616 STIM1Q13586 685 aa15.69■□□□□ 0.1
NEK9-201ENST00000238616 TTLL12Q14166 644 aaPredicted RBP15.69■□□□□ 0.1
NEK9-201ENST00000238616 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
NEK9-201ENST00000238616 RRP1P56182 461 aaKnown RBP15.69■□□□□ 0.1
NEK9-201ENST00000238616 GOLGA6L10A0A0M3HER8 536 aa15.68■□□□□ 0.1
NEK9-201ENST00000238616 FKBP4Q02790 459 aaKnown RBP eCLIP15.68■□□□□ 0.1
NEK9-201ENST00000238616 SOGA1O94964 1423 aa15.68■□□□□ 0.1
NEK9-201ENST00000238616 PDE3BQ13370 1112 aa15.68■□□□□ 0.1
NEK9-201ENST00000238616 NF2P35240 595 aa15.67■□□□□ 0.1
NEK9-201ENST00000238616 SMG6Q86US8 1419 aaKnown RBP15.67■□□□□ 0.1
NEK9-201ENST00000238616 DRC1Q96MC2 740 aa15.67■□□□□ 0.1
NEK9-201ENST00000238616 MPHOSPH8Q99549 860 aa15.67■□□□□ 0.1
NEK9-201ENST00000238616 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
NEK9-201ENST00000238616 NUCB2P80303 420 aa15.67■□□□□ 0.1
NEK9-201ENST00000238616 CAVIN1Q6NZI2 390 aaKnown RBP15.67■□□□□ 0.1
NEK9-201ENST00000238616 WDR78Q5VTH9 848 aa15.67■□□□□ 0.1
NEK9-201ENST00000238616 CCDC158Q5M9N0 1113 aa15.66■□□□□ 0.1
NEK9-201ENST00000238616 NFKBIBQ15653 356 aa15.66■□□□□ 0.1
NEK9-201ENST00000238616 BICDL1Q6ZP65 573 aa15.66■□□□□ 0.1
NEK9-201ENST00000238616 CCDC112Q8NEF3 446 aa15.65■□□□□ 0.1
NEK9-201ENST00000238616 LUC7LQ9NQ29 371 aaKnown RBP15.65■□□□□ 0.1
NEK9-201ENST00000238616 KIAA0754O94854 1291 aa15.65■□□□□ 0.1
NEK9-201ENST00000238616 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.65■□□□□ 0.15e-6■■■■■ 34.6
NEK9-201ENST00000238616 PPFIBP1Q86W92 1011 aa15.65■□□□□ 0.1
NEK9-201ENST00000238616 API5Q9BZZ5 524 aaKnown RBP15.65■□□□□ 0.1
NEK9-201ENST00000238616 C22orf23Q9BZE7 217 aa15.65■□□□□ 0.1
NEK9-201ENST00000238616 SURF6O75683 361 aaKnown RBP15.64■□□□□ 0.09
NEK9-201ENST00000238616 WIZO95785 1651 aa15.64■□□□□ 0.09
NEK9-201ENST00000238616 NLRP6P59044 892 aa15.64■□□□□ 0.09
NEK9-201ENST00000238616 C1orf115Q9H7X2 142 aa15.64■□□□□ 0.09
NEK9-201ENST00000238616 SOGA3Q5TF21 947 aa15.64■□□□□ 0.09
NEK9-201ENST00000238616 FIBPO43427 364 aa15.64■□□□□ 0.09
NEK9-201ENST00000238616 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
NEK9-201ENST00000238616 ME1P48163 572 aa15.63■□□□□ 0.09
NEK9-201ENST00000238616 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
NEK9-201ENST00000238616 STK38Q15208 465 aa15.63■□□□□ 0.09
NEK9-201ENST00000238616 TOM1L2Q6ZVM7 507 aa15.63■□□□□ 0.09
NEK9-201ENST00000238616 GOLGA6L7A0A1B0GV03 622 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
NEK9-201ENST00000238616 CABP4P57796 275 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
NEK9-201ENST00000238616 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 MPNDQ8N594 471 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 DYDC1Q8WWB3 177 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 CCDC39Q9UFE4 941 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 COMMD10Q9Y6G5 202 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
NEK9-201ENST00000238616 ZNF396Q96N95 335 aaPredicted RBP15.62■□□□□ 0.09
NEK9-201ENST00000238616 TRIM22Q8IYM9 498 aa15.61■□□□□ 0.09
NEK9-201ENST00000238616 CCDC113Q9H0I3 377 aa15.61■□□□□ 0.09
NEK9-201ENST00000238616 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
NEK9-201ENST00000238616 CCDC30Q5VVM6 783 aa15.61■□□□□ 0.09
NEK9-201ENST00000238616 TDO2P48775 406 aa15.61■□□□□ 0.09
NEK9-201ENST00000238616 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
NEK9-201ENST00000238616 RUNDC1Q96C34 613 aa15.6■□□□□ 0.09
NEK9-201ENST00000238616 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms