RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 PAK3O75914 559 aaPredicted RBP30.34■■■□□ 2.45
SLC25A39-201ENST00000225308 ABCA3Q99758 1704 aa30.34■■■□□ 2.45
SLC25A39-201ENST00000225308 ZNF692Q9BU19 519 aaPredicted RBP30.33■■■□□ 2.45
SLC25A39-201ENST00000225308 BRD4O60885 1362 aaPredicted RBP30.33■■■□□ 2.45
SLC25A39-201ENST00000225308 LMOD2Q6P5Q4 547 aa30.33■■■□□ 2.45
SLC25A39-201ENST00000225308 A0A1W2PP64 1363 aa30.32■■■□□ 2.44
SLC25A39-201ENST00000225308 C11orf95C9JLR9 678 aaPredicted RBP30.32■■■□□ 2.44
SLC25A39-201ENST00000225308 ZEB1P37275 1124 aaPredicted RBP30.32■■■□□ 2.44
SLC25A39-201ENST00000225308 KTN1Q86UP2 1357 aaKnown RBP30.32■■■□□ 2.44
SLC25A39-201ENST00000225308 CRYBG1Q9Y4K1 1723 aa30.31■■■□□ 2.44
SLC25A39-201ENST00000225308 PIK3C2AO00443 1686 aa30.29■■■□□ 2.44
SLC25A39-201ENST00000225308 NUTM2BA6NNL0 878 aaPredicted RBP30.29■■■□□ 2.44
SLC25A39-201ENST00000225308 NUTM2EB1AL46 878 aaPredicted RBP30.29■■■□□ 2.44
SLC25A39-201ENST00000225308 NUTM2AQ8IVF1 878 aaPredicted RBP30.29■■■□□ 2.44
SLC25A39-201ENST00000225308 TERF2IPQ9NYB0 399 aa30.29■■■□□ 2.44
SLC25A39-201ENST00000225308 ANKRD36BQ8N2N9 1353 aa30.27■■■□□ 2.44
SLC25A39-201ENST00000225308 HDGFL2Q7Z4V5 671 aaPredicted RBP30.27■■■□□ 2.44
SLC25A39-201ENST00000225308 MARF1Q9Y4F3 1742 aaKnown RBP30.26■■■□□ 2.43
SLC25A39-201ENST00000225308 CABLES1Q8TDN4 633 aa30.25■■■□□ 2.43
SLC25A39-201ENST00000225308 TTC21BQ7Z4L5 1316 aa30.25■■■□□ 2.43
SLC25A39-201ENST00000225308 EDC4Q6P2E9 1401 aaKnown RBP30.24■■■□□ 2.43
SLC25A39-201ENST00000225308 ABTB2Q8N961 1025 aa30.24■■■□□ 2.43
SLC25A39-201ENST00000225308 POLR3GLQ9BT43 218 aa30.24■■■□□ 2.43
SLC25A39-201ENST00000225308 PHRF1Q9P1Y6 1649 aaKnown RBP30.23■■■□□ 2.43
SLC25A39-201ENST00000225308 KIF7Q2M1P5 1343 aa30.22■■■□□ 2.43
SLC25A39-201ENST00000225308 NUTM2GQ5VZR2 741 aa30.22■■■□□ 2.43
SLC25A39-201ENST00000225308 TTC21AQ8NDW8 1320 aa30.21■■■□□ 2.43
SLC25A39-201ENST00000225308 PLEKHG5O94827 1062 aa30.21■■■□□ 2.43
SLC25A39-201ENST00000225308 ADAMTS2O95450 1211 aa30.18■■■□□ 2.42
SLC25A39-201ENST00000225308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.18■■■□□ 2.42
SLC25A39-201ENST00000225308 USP54Q70EL1 1684 aa30.17■■■□□ 2.42
SLC25A39-201ENST00000225308 USP19O94966 1318 aa30.17■■■□□ 2.42
SLC25A39-201ENST00000225308 MEX3CQ5U5Q3 659 aaKnown RBP30.17■■■□□ 2.42
SLC25A39-201ENST00000225308 NLRP6P59044 892 aa30.14■■■□□ 2.42
SLC25A39-201ENST00000225308 NLRP13Q86W25 1043 aa30.14■■■□□ 2.42
SLC25A39-201ENST00000225308 WASHC2AQ641Q2 1341 aa30.14■■■□□ 2.42
SLC25A39-201ENST00000225308 HAP1P54257 671 aaPredicted RBP30.14■■■□□ 2.41
SLC25A39-201ENST00000225308 CCDC7Q96M83 1385 aa30.14■■■□□ 2.41
SLC25A39-201ENST00000225308 SLIT3O75094 1523 aa30.13■■■□□ 2.41
SLC25A39-201ENST00000225308 CARD14Q9BXL6 1004 aa30.13■■■□□ 2.41
SLC25A39-201ENST00000225308 NME9Q86XW9 330 aa30.12■■■□□ 2.41
SLC25A39-201ENST00000225308 C8orf37Q96NL8 207 aa30.11■■■□□ 2.41
SLC25A39-201ENST00000225308 USP31Q70CQ4 1352 aa30.11■■■□□ 2.41
SLC25A39-201ENST00000225308 KIF20BQ96Q89 1820 aa30.1■■■□□ 2.41
SLC25A39-201ENST00000225308 NSD3Q9BZ95 1437 aa30.1■■■□□ 2.41
SLC25A39-201ENST00000225308 PHF23Q9BUL5 403 aaPredicted RBP30.09■■■□□ 2.41
SLC25A39-201ENST00000225308 ZRANB1Q9UGI0 708 aa30.09■■■□□ 2.41
SLC25A39-201ENST00000225308 RGS17Q9UGC6 210 aaPredicted RBP30.08■■■□□ 2.41
SLC25A39-201ENST00000225308 OVOS2A0A0J9YW53 1432 aa30.07■■■□□ 2.41
SLC25A39-201ENST00000225308 OVOS2Q6IE36 1432 aa30.07■■■□□ 2.41
SLC25A39-201ENST00000225308 PLCH1Q4KWH8 1693 aa30.07■■■□□ 2.4
SLC25A39-201ENST00000225308 GCP02774 474 aa30.06■■■□□ 2.4
SLC25A39-201ENST00000225308 NGLY1Q96IV0 654 aa30.06■■■□□ 2.4
SLC25A39-201ENST00000225308 PANK3Q9H999 370 aa30.05■■■□□ 2.4
SLC25A39-201ENST00000225308 AFF2P51816 1311 aa30.05■■■□□ 2.4
SLC25A39-201ENST00000225308 KIAA0232Q92628 1395 aa30.04■■■□□ 2.4
SLC25A39-201ENST00000225308 COL14A1Q05707 1796 aaKnown RBP30.04■■■□□ 2.4
SLC25A39-201ENST00000225308 NFAT5O94916 1531 aa30.03■■■□□ 2.4
SLC25A39-201ENST00000225308 FNBP4Q8N3X1 1017 aaPredicted RBP30.03■■■□□ 2.4
SLC25A39-201ENST00000225308 SLIT2O94813 1529 aa30.02■■■□□ 2.4
SLC25A39-201ENST00000225308 NWD2Q9ULI1 1742 aa30.02■■■□□ 2.4
SLC25A39-201ENST00000225308 FYB1O15117 783 aa30.02■■■□□ 2.4
SLC25A39-201ENST00000225308 FAM83GA6ND36 823 aa30.01■■■□□ 2.39
SLC25A39-201ENST00000225308 CPDO75976 1380 aa30.01■■■□□ 2.39
SLC25A39-201ENST00000225308 ZC3H6P61129 1189 aaKnown RBP30.01■■■□□ 2.39
SLC25A39-201ENST00000225308 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.99■■■□□ 2.39
SLC25A39-201ENST00000225308 BCL9LQ86UU0 1499 aa29.99■■■□□ 2.39
SLC25A39-201ENST00000225308 PRDM11Q9NQV5 511 aa29.99■■■□□ 2.39
SLC25A39-201ENST00000225308 KCNH5Q8NCM2 988 aa29.98■■■□□ 2.39
SLC25A39-201ENST00000225308 GGNBP2Q9H3C7 697 aa29.98■■■□□ 2.39
SLC25A39-201ENST00000225308 CGNL1Q0VF96 1302 aa29.97■■■□□ 2.39
SLC25A39-201ENST00000225308 NRAPQ86VF7 1730 aa29.97■■■□□ 2.39
SLC25A39-201ENST00000225308 COG3Q96JB2 828 aa29.96■■■□□ 2.39
SLC25A39-201ENST00000225308 LMO7Q8WWI1 1683 aa29.96■■■□□ 2.39
SLC25A39-201ENST00000225308 SOX12O15370 315 aa29.96■■■□□ 2.39
SLC25A39-201ENST00000225308 ZNF772Q68DY9 489 aaPredicted RBP29.96■■■□□ 2.39
SLC25A39-201ENST00000225308 LTN1O94822 1766 aa29.96■■■□□ 2.39
SLC25A39-201ENST00000225308 ANKRD26Q9UPS8 1709 aa29.95■■■□□ 2.39
SLC25A39-201ENST00000225308 CHRNA2Q15822 529 aa29.95■■■□□ 2.38
SLC25A39-201ENST00000225308 USP21Q9UK80 565 aa29.95■■■□□ 2.38
SLC25A39-201ENST00000225308 COL18A1P39060 1754 aa29.94■■■□□ 2.38
SLC25A39-201ENST00000225308 POTEAQ6S8J7 498 aa29.93■■■□□ 2.38
SLC25A39-201ENST00000225308 ARHGEF25Q86VW2 580 aa29.92■■■□□ 2.38
SLC25A39-201ENST00000225308 BTG4Q9NY30 223 aa29.91■■■□□ 2.38
SLC25A39-201ENST00000225308 CAMTA1Q9Y6Y1 1673 aa29.9■■■□□ 2.38
SLC25A39-201ENST00000225308 PER1O15534 1290 aaPredicted RBP29.9■■■□□ 2.38
SLC25A39-201ENST00000225308 UNC5CLQ8IV45 518 aa29.89■■■□□ 2.38
SLC25A39-201ENST00000225308 AATKQ6ZMQ8 1374 aa29.89■■■□□ 2.38
SLC25A39-201ENST00000225308 RGPD5Q99666 1765 aa29.89■■■□□ 2.38
SLC25A39-201ENST00000225308 KNSTRNQ9Y448 316 aa29.89■■■□□ 2.37
SLC25A39-201ENST00000225308 ATRNO75882 1429 aa29.88■■■□□ 2.37
SLC25A39-201ENST00000225308 ZBTB7CA1YPR0 619 aa29.86■■■□□ 2.37
SLC25A39-201ENST00000225308 ABCC6O95255 1503 aa29.86■■■□□ 2.37
SLC25A39-201ENST00000225308 NSD2O96028 1365 aa29.86■■■□□ 2.37
SLC25A39-201ENST00000225308 QTRT2Q9H974 415 aaKnown RBP29.85■■■□□ 2.37
SLC25A39-201ENST00000225308 FBLN1P23142 703 aa29.85■■■□□ 2.37
SLC25A39-201ENST00000225308 AMER1Q5JTC6 1135 aaPredicted RBP29.85■■■□□ 2.37
SLC25A39-201ENST00000225308 TRPC5Q9UL62 973 aaPredicted RBP29.84■■■□□ 2.37
SLC25A39-201ENST00000225308 COL5A2P05997 1499 aaPredicted RBP29.82■■■□□ 2.36
SLC25A39-201ENST00000225308 AXIN2Q9Y2T1 843 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms