RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 SBNO1A3KN83 1393 aa36.87■■■■□ 3.49
STUB1-201ENST00000219548 TNS3Q68CZ2 1445 aa36.87■■■■□ 3.49
STUB1-201ENST00000219548 LRRC59Q96AG4 307 aaKnown RBP36.87■■■■□ 3.49
STUB1-201ENST00000219548 SPATA31A3Q5VYP0 1347 aa36.86■■■■□ 3.49
STUB1-201ENST00000219548 SSH2Q76I76 1423 aa36.85■■■■□ 3.49
STUB1-201ENST00000219548 SHPRHQ149N8 1683 aa36.84■■■■□ 3.49
STUB1-201ENST00000219548 LMOD2Q6P5Q4 547 aa36.82■■■■□ 3.49
STUB1-201ENST00000219548 EDC4Q6P2E9 1401 aaKnown RBP36.81■■■■□ 3.48
STUB1-201ENST00000219548 PIK3C2AO00443 1686 aa36.81■■■■□ 3.48
STUB1-201ENST00000219548 BRD4O60885 1362 aaPredicted RBP36.8■■■■□ 3.48
STUB1-201ENST00000219548 TTC21BQ7Z4L5 1316 aa36.8■■■■□ 3.48
STUB1-201ENST00000219548 PANK3Q9H999 370 aa36.8■■■■□ 3.48
STUB1-201ENST00000219548 PNPLA6Q8IY17 1366 aa36.79■■■■□ 3.48
STUB1-201ENST00000219548 JCADQ9P266 1359 aa36.79■■■■□ 3.48
STUB1-201ENST00000219548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.79■■■■□ 3.48
STUB1-201ENST00000219548 CARD14Q9BXL6 1004 aa36.78■■■■□ 3.48
STUB1-201ENST00000219548 NSD3Q9BZ95 1437 aa36.77■■■■□ 3.48
STUB1-201ENST00000219548 COL22A1Q8NFW1 1626 aaPredicted RBP36.77■■■■□ 3.48
STUB1-201ENST00000219548 ZNF316A6NFI3 1004 aaPredicted RBP36.75■■■■□ 3.47
STUB1-201ENST00000219548 ARHGEF10O15013 1369 aa36.75■■■■□ 3.47
STUB1-201ENST00000219548 NUTM2GQ5VZR2 741 aa36.75■■■■□ 3.47
STUB1-201ENST00000219548 ABTB2Q8N961 1025 aa36.74■■■■□ 3.47
STUB1-201ENST00000219548 KIF20BQ96Q89 1820 aa36.74■■■■□ 3.47
STUB1-201ENST00000219548 TTC21AQ8NDW8 1320 aa36.73■■■■□ 3.47
STUB1-201ENST00000219548 PLEKHG5O94827 1062 aa36.73■■■■□ 3.47
STUB1-201ENST00000219548 ABCA3Q99758 1704 aa36.72■■■■□ 3.47
STUB1-201ENST00000219548 MARF1Q9Y4F3 1742 aaKnown RBP36.72■■■■□ 3.47
STUB1-201ENST00000219548 CRYBG1Q9Y4K1 1723 aa36.71■■■■□ 3.47
STUB1-201ENST00000219548 NME9Q86XW9 330 aa36.7■■■■□ 3.47
STUB1-201ENST00000219548 MED1Q15648 1581 aaPredicted RBP36.67■■■■□ 3.46
STUB1-201ENST00000219548 ZRANB1Q9UGI0 708 aa36.67■■■■□ 3.46
STUB1-201ENST00000219548 CABLES1Q8TDN4 633 aa36.66■■■■□ 3.46
STUB1-201ENST00000219548 PHRF1Q9P1Y6 1649 aaKnown RBP36.66■■■■□ 3.46
STUB1-201ENST00000219548 USP54Q70EL1 1684 aa36.65■■■■□ 3.46
STUB1-201ENST00000219548 NLRP6P59044 892 aa36.64■■■■□ 3.46
STUB1-201ENST00000219548 NUTM2BA6NNL0 878 aaPredicted RBP36.61■■■■□ 3.45
STUB1-201ENST00000219548 NUTM2EB1AL46 878 aaPredicted RBP36.61■■■■□ 3.45
STUB1-201ENST00000219548 DDX10Q13206 875 aaKnown RBP36.61■■■■□ 3.45
STUB1-201ENST00000219548 NLRP13Q86W25 1043 aa36.61■■■■□ 3.45
STUB1-201ENST00000219548 NUTM2AQ8IVF1 878 aaPredicted RBP36.61■■■■□ 3.45
STUB1-201ENST00000219548 SPATA31A6Q5VVP1 1343 aa36.6■■■■□ 3.45
STUB1-201ENST00000219548 FYB1O15117 783 aa36.59■■■■□ 3.45
STUB1-201ENST00000219548 CGNL1Q0VF96 1302 aa36.59■■■■□ 3.45
STUB1-201ENST00000219548 LRP6O75581 1613 aa36.58■■■■□ 3.45
STUB1-201ENST00000219548 USP31Q70CQ4 1352 aa36.58■■■■□ 3.45
STUB1-201ENST00000219548 GGNBP2Q9H3C7 697 aa36.58■■■■□ 3.45
STUB1-201ENST00000219548 KNSTRNQ9Y448 316 aa36.58■■■■□ 3.45
STUB1-201ENST00000219548 ANKRD26Q9UPS8 1709 aa36.58■■■■□ 3.45
STUB1-201ENST00000219548 OVOS2A0A0J9YW53 1432 aa36.57■■■■□ 3.45
STUB1-201ENST00000219548 OVOS2Q6IE36 1432 aa36.57■■■■□ 3.45
STUB1-201ENST00000219548 USP19O94966 1318 aa36.57■■■■□ 3.45
STUB1-201ENST00000219548 PER1O15534 1290 aaPredicted RBP36.57■■■■□ 3.45
STUB1-201ENST00000219548 SLIT3O75094 1523 aa36.56■■■■□ 3.44
STUB1-201ENST00000219548 HAP1P54257 671 aaPredicted RBP36.55■■■■□ 3.44
STUB1-201ENST00000219548 COG3Q96JB2 828 aa36.51■■■■□ 3.44
STUB1-201ENST00000219548 SOX12O15370 315 aa36.5■■■■□ 3.43
STUB1-201ENST00000219548 ADAMTS2O95450 1211 aa36.5■■■■□ 3.43
STUB1-201ENST00000219548 AMER1Q5JTC6 1135 aaPredicted RBP36.5■■■■□ 3.43
STUB1-201ENST00000219548 GCP02774 474 aa36.48■■■■□ 3.43
STUB1-201ENST00000219548 NFAT5O94916 1531 aa36.46■■■■□ 3.43
STUB1-201ENST00000219548 NSD2O96028 1365 aa36.45■■■■□ 3.43
STUB1-201ENST00000219548 CNGB1Q14028 1251 aaPredicted RBP36.45■■■■□ 3.43
STUB1-201ENST00000219548 LTN1O94822 1766 aa36.43■■■■□ 3.42
STUB1-201ENST00000219548 ZC3H6P61129 1189 aaKnown RBP36.43■■■■□ 3.42
STUB1-201ENST00000219548 CC2D1BQ5T0F9 858 aaKnown RBP36.43■■■■□ 3.42
STUB1-201ENST00000219548 MEX3CQ5U5Q3 659 aaKnown RBP36.41■■■■□ 3.42
STUB1-201ENST00000219548 KCNH5Q8NCM2 988 aa36.41■■■■□ 3.42
STUB1-201ENST00000219548 KIAA0232Q92628 1395 aa36.4■■■■□ 3.42
STUB1-201ENST00000219548 FBLN1P23142 703 aa36.39■■■■□ 3.42
STUB1-201ENST00000219548 NPC1L1Q9UHC9 1359 aa36.37■■■■□ 3.41
STUB1-201ENST00000219548 ZBTB7CA1YPR0 619 aa36.37■■■■□ 3.41
STUB1-201ENST00000219548 MAP2P11137 1827 aaKnown RBP36.36■■■■□ 3.41
STUB1-201ENST00000219548 PLCH1Q4KWH8 1693 aa36.36■■■■□ 3.41
STUB1-201ENST00000219548 TNNT2P45379 298 aaPredicted RBP36.35■■■■□ 3.41
STUB1-201ENST00000219548 MORC1Q86VD1 984 aa36.35■■■■□ 3.41
STUB1-201ENST00000219548 C8orf37Q96NL8 207 aa36.35■■■■□ 3.41
STUB1-201ENST00000219548 PRDM11Q9NQV5 511 aa36.35■■■■□ 3.41
STUB1-201ENST00000219548 COL14A1Q05707 1796 aaKnown RBP36.35■■■■□ 3.41
STUB1-201ENST00000219548 CPDO75976 1380 aa36.34■■■■□ 3.41
STUB1-201ENST00000219548 CHRNA2Q15822 529 aa36.33■■■■□ 3.41
STUB1-201ENST00000219548 FAM83GA6ND36 823 aa36.31■■■■□ 3.4
STUB1-201ENST00000219548 COL18A1P39060 1754 aa36.31■■■■□ 3.4
STUB1-201ENST00000219548 RGPD5Q99666 1765 aa36.31■■■■□ 3.4
STUB1-201ENST00000219548 ARHGEF25Q86VW2 580 aa36.31■■■■□ 3.4
STUB1-201ENST00000219548 RRS1Q15050 365 aaKnown RBP36.29■■■■□ 3.4
STUB1-201ENST00000219548 NGLY1Q96IV0 654 aa36.29■■■■□ 3.4
STUB1-201ENST00000219548 LMO7Q8WWI1 1683 aa36.29■■■■□ 3.4
STUB1-201ENST00000219548 MAP3K19Q56UN5 1328 aa36.27■■■■□ 3.4
STUB1-201ENST00000219548 NWD2Q9ULI1 1742 aa36.26■■■■□ 3.4
STUB1-201ENST00000219548 PEAK1Q9H792 1746 aa36.26■■■■□ 3.39
STUB1-201ENST00000219548 AATKQ6ZMQ8 1374 aa36.25■■■■□ 3.39
STUB1-201ENST00000219548 SLIT2O94813 1529 aa36.24■■■■□ 3.39
STUB1-201ENST00000219548 NRAPQ86VF7 1730 aa36.23■■■■□ 3.39
STUB1-201ENST00000219548 AFF2P51816 1311 aa36.22■■■■□ 3.39
STUB1-201ENST00000219548 CAMTA1Q9Y6Y1 1673 aa36.22■■■■□ 3.39
STUB1-201ENST00000219548 EMILIN1Q9Y6C2 1016 aa36.22■■■■□ 3.39
STUB1-201ENST00000219548 BTG4Q9NY30 223 aa36.21■■■■□ 3.39
STUB1-201ENST00000219548 ABCC6O95255 1503 aa36.19■■■■□ 3.38
STUB1-201ENST00000219548 FNBP4Q8N3X1 1017 aaPredicted RBP36.19■■■■□ 3.38
STUB1-201ENST00000219548 POLKQ9UBT6 870 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms