RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 KCNJ4P48050 445 aa15.33■□□□□ 0.04
TM9SF4-201ENST00000217315 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
TM9SF4-201ENST00000217315 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
TM9SF4-201ENST00000217315 ZNF692Q9BU19 519 aaPredicted RBP15.33■□□□□ 0.04
TM9SF4-201ENST00000217315 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.04
TM9SF4-201ENST00000217315 CHD1O14646 1710 aa15.32■□□□□ 0.04
TM9SF4-201ENST00000217315 NSD2O96028 1365 aa15.32■□□□□ 0.04
TM9SF4-201ENST00000217315 ZMYM4Q5VZL5 1548 aa15.32■□□□□ 0.04
TM9SF4-201ENST00000217315 A0A0G2JS52 829 aa15.32■□□□□ 0.04
TM9SF4-201ENST00000217315 EIF2S2P20042 333 aaKnown RBP15.32■□□□□ 0.04
TM9SF4-201ENST00000217315 C8orf34Q49A92 452 aa15.31■□□□□ 0.04
TM9SF4-201ENST00000217315 UGGT1Q9NYU2 1555 aa15.31■□□□□ 0.04
TM9SF4-201ENST00000217315 WASLO00401 505 aaPredicted RBP15.31■□□□□ 0.04
TM9SF4-201ENST00000217315 RILPL2Q969X0 211 aa15.31■□□□□ 0.04
TM9SF4-201ENST00000217315 ABCC1P33527 1531 aa15.3■□□□□ 0.04
TM9SF4-201ENST00000217315 CHD1LQ86WJ1 897 aa15.29■□□□□ 0.04
TM9SF4-201ENST00000217315 CROCC2H7BZ55 1655 aa15.29■□□□□ 0.04
TM9SF4-201ENST00000217315 ABCC11Q96J66 1382 aa15.29■□□□□ 0.04
TM9SF4-201ENST00000217315 PTPRTO14522 1441 aa15.29■□□□□ 0.04
TM9SF4-201ENST00000217315 NPATQ14207 1427 aa15.29■□□□□ 0.04
TM9SF4-201ENST00000217315 FOXD4L5Q5VV16 416 aaPredicted RBP15.28■□□□□ 0.04
TM9SF4-201ENST00000217315 FOXD4L4Q8WXT5 416 aaPredicted RBP15.28■□□□□ 0.04
TM9SF4-201ENST00000217315 A0A1W2PP64 1363 aa15.28■□□□□ 0.04
TM9SF4-201ENST00000217315 CCDC27Q2M243 656 aa15.28■□□□□ 0.04
TM9SF4-201ENST00000217315 INSRP06213 1382 aa15.28■□□□□ 0.04
TM9SF4-201ENST00000217315 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
TM9SF4-201ENST00000217315 KIAA1211Q6ZU35 1233 aa15.28■□□□□ 0.04
TM9SF4-201ENST00000217315 ST18O60284 1047 aa15.27■□□□□ 0.04
TM9SF4-201ENST00000217315 GCC1Q96CN9 775 aa15.27■□□□□ 0.04
TM9SF4-201ENST00000217315 TEFQ10587 303 aa15.27■□□□□ 0.04
TM9SF4-201ENST00000217315 MCM10Q7L590 875 aa15.27■□□□□ 0.04
TM9SF4-201ENST00000217315 UHRF1BP1LA0JNW5 1464 aa15.27■□□□□ 0.04
TM9SF4-201ENST00000217315 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.04
TM9SF4-201ENST00000217315 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 ZNF428Q96B54 188 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 KDM2BQ8NHM5 1336 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 DDX11L8A8MPP1 907 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 IL27Q8NEV9 243 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 MIS18AQ9NYP9 233 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 BRPF3Q9ULD4 1205 aa15.27■□□□□ 0.03
TM9SF4-201ENST00000217315 FAM83GA6ND36 823 aa15.26■□□□□ 0.03
TM9SF4-201ENST00000217315 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
TM9SF4-201ENST00000217315 PUS7Q96PZ0 661 aaKnown RBP15.26■□□□□ 0.03
TM9SF4-201ENST00000217315 PSME1Q06323 249 aa15.25■□□□□ 0.03
TM9SF4-201ENST00000217315 CDC45O75419 566 aa15.25■□□□□ 0.03
TM9SF4-201ENST00000217315 PTMAP06454 111 aaKnown RBP15.25■□□□□ 0.03
TM9SF4-201ENST00000217315 CEBPAP49715 358 aaPredicted RBP15.25■□□□□ 0.03
TM9SF4-201ENST00000217315 POLKQ9UBT6 870 aa15.25■□□□□ 0.03
TM9SF4-201ENST00000217315 ZCCHC11Q5TAX3 1644 aaKnown RBP15.25■□□□□ 0.03
TM9SF4-201ENST00000217315 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
TM9SF4-201ENST00000217315 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
TM9SF4-201ENST00000217315 TRPM2O94759 1503 aa15.24■□□□□ 0.03
TM9SF4-201ENST00000217315 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
TM9SF4-201ENST00000217315 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
TM9SF4-201ENST00000217315 REC8O95072 547 aa15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 NCKAP5LQ9HCH0 1330 aa15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 SEC24BO95487 1268 aa15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 TRPM1Q7Z4N2 1603 aa15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 INTS3Q68E01 1043 aaKnown RBP15.23■□□□□ 0.03
TM9SF4-201ENST00000217315 IQGAP3Q86VI3 1631 aa15.22■□□□□ 0.03
TM9SF4-201ENST00000217315 GAS2L2Q8NHY3 880 aa15.22■□□□□ 0.03
TM9SF4-201ENST00000217315 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
TM9SF4-201ENST00000217315 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 FGD1P98174 961 aa15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 IL16Q14005 1332 aa15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 PLXNC1O60486 1568 aa15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 ANO2Q9NQ90 1003 aa15.21■□□□□ 0.03
TM9SF4-201ENST00000217315 C1orf141Q5JVX7 400 aa15.21■□□□□ 0.02
TM9SF4-201ENST00000217315 SBNO2Q9Y2G9 1366 aa15.2■□□□□ 0.02
TM9SF4-201ENST00000217315 PTMSP20962 102 aa15.2■□□□□ 0.02
TM9SF4-201ENST00000217315 ZFYVE16Q7Z3T8 1539 aa15.19■□□□□ 0.02
TM9SF4-201ENST00000217315 TRMT2AQ8IZ69 625 aaKnown RBP15.19■□□□□ 0.02
TM9SF4-201ENST00000217315 THEMISQ8N1K5 641 aaPredicted RBP15.19■□□□□ 0.02
TM9SF4-201ENST00000217315 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
TM9SF4-201ENST00000217315 UNC13BO14795 1591 aa15.19■□□□□ 0.02
TM9SF4-201ENST00000217315 TRAK2O60296 914 aa15.19■□□□□ 0.02
TM9SF4-201ENST00000217315 TSPYL6Q8N831 410 aa15.19■□□□□ 0.02
TM9SF4-201ENST00000217315 TBC1D32Q96NH3 1257 aa15.18■□□□□ 0.02
TM9SF4-201ENST00000217315 CCDC30Q5VVM6 783 aa15.18■□□□□ 0.02
TM9SF4-201ENST00000217315 C9orf78Q9NZ63 289 aaPredicted RBP15.18■□□□□ 0.02
TM9SF4-201ENST00000217315 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
TM9SF4-201ENST00000217315 TRIM35Q9UPQ4 493 aa15.18■□□□□ 0.02
TM9SF4-201ENST00000217315 HSP90AB2PQ58FF8 381 aa15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 NAP1L2Q9ULW6 460 aaPredicted RBP15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 ZNF330Q9Y3S2 320 aaPredicted RBP15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 UBTFL1P0CB47 393 aaPredicted RBP15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
TM9SF4-201ENST00000217315 KDM5AP29375 1690 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms