RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 NLRP2Q9NX02 1062 aa10.78□□□□□ -0.68
CSNK2A1-201ENST00000217244 PREX2Q70Z35 1606 aa10.77□□□□□ -0.68
CSNK2A1-201ENST00000217244 ACEP12821 1306 aa10.77□□□□□ -0.69
CSNK2A1-201ENST00000217244 SLC4A2P04920 1241 aa10.77□□□□□ -0.69
CSNK2A1-201ENST00000217244 WDR63Q8IWG1 891 aa10.77□□□□□ -0.69
CSNK2A1-201ENST00000217244 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.69
CSNK2A1-201ENST00000217244 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
CSNK2A1-201ENST00000217244 PDE3AQ14432 1141 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 POLKQ9UBT6 870 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 ABCC1P33527 1531 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 KDM5CP41229 1560 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 FOXD4L6Q3SYB3 417 aaPredicted RBP10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 FOXD4L3Q6VB84 417 aaPredicted RBP10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 RILPL2Q969X0 211 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 POGZQ7Z3K3 1410 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 EIF5BO60841 1220 aaKnown RBP10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 TRIM27P14373 513 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 MVPQ14764 893 aaKnown RBP10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
CSNK2A1-201ENST00000217244 F6X3S4 739 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 FCHSD2O94868 740 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 NFE2L2Q16236 605 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 CASC1Q6TDU7 716 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 PCDHB15Q9Y5E8 787 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 SHROOM2Q13796 1616 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 CDC42BPBQ9Y5S2 1711 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 KCNJ4P48050 445 aa10.75□□□□□ -0.69
CSNK2A1-201ENST00000217244 TSPYL6Q8N831 410 aa10.74□□□□□ -0.69
CSNK2A1-201ENST00000217244 ZMYM3Q14202 1370 aa10.74□□□□□ -0.69
CSNK2A1-201ENST00000217244 RIMS2Q9UQ26 1411 aa10.74□□□□□ -0.69
CSNK2A1-201ENST00000217244 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
CSNK2A1-201ENST00000217244 C1orf141Q5JVX7 400 aa10.74□□□□□ -0.69
CSNK2A1-201ENST00000217244 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
CSNK2A1-201ENST00000217244 ANKLE2Q86XL3 938 aa10.73□□□□□ -0.69
CSNK2A1-201ENST00000217244 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
CSNK2A1-201ENST00000217244 TNRQ92752 1358 aa10.73□□□□□ -0.69
CSNK2A1-201ENST00000217244 PRDM15P57071 1507 aaPredicted RBP10.73□□□□□ -0.69
CSNK2A1-201ENST00000217244 API5Q9BZZ5 524 aaKnown RBP10.72□□□□□ -0.69
CSNK2A1-201ENST00000217244 NAP1L2Q9ULW6 460 aaPredicted RBP10.72□□□□□ -0.69
CSNK2A1-201ENST00000217244 ANXA1P04083 346 aa10.72□□□□□ -0.69
CSNK2A1-201ENST00000217244 LTKP29376 864 aa10.72□□□□□ -0.69
CSNK2A1-201ENST00000217244 KDM5DQ9BY66 1539 aa10.72□□□□□ -0.69
CSNK2A1-201ENST00000217244 ATF3P18847 181 aa10.72□□□□□ -0.69
CSNK2A1-201ENST00000217244 KCNA6P17658 529 aa10.71□□□□□ -0.69
CSNK2A1-201ENST00000217244 PTPRTO14522 1441 aa10.71□□□□□ -0.69
CSNK2A1-201ENST00000217244 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.69
CSNK2A1-201ENST00000217244 TSPOAP1O95153 1857 aa10.71□□□□□ -0.69
CSNK2A1-201ENST00000217244 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
CSNK2A1-201ENST00000217244 UHRF1BP1LA0JNW5 1464 aa10.71□□□□□ -0.7
CSNK2A1-201ENST00000217244 SMARCA5O60264 1052 aaPredicted RBP10.7□□□□□ -0.7
CSNK2A1-201ENST00000217244 C8orf58Q8NAV2 365 aa10.7□□□□□ -0.7
CSNK2A1-201ENST00000217244 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
CSNK2A1-201ENST00000217244 SYTL4Q96C24 671 aaPredicted RBP10.7□□□□□ -0.7
CSNK2A1-201ENST00000217244 HMMRO75330 724 aa10.7□□□□□ -0.7
CSNK2A1-201ENST00000217244 ZFYVE16Q7Z3T8 1539 aa10.7□□□□□ -0.7
CSNK2A1-201ENST00000217244 ZNF530Q6P9A1 599 aaPredicted RBP10.69□□□□□ -0.7
CSNK2A1-201ENST00000217244 C22orf23Q9BZE7 217 aa10.69□□□□□ -0.7
CSNK2A1-201ENST00000217244 STRN4Q9NRL3 753 aa10.69□□□□□ -0.7
CSNK2A1-201ENST00000217244 HDGFL1Q5TGJ6 251 aa10.69□□□□□ -0.7
CSNK2A1-201ENST00000217244 FRAT2O75474 233 aaPredicted RBP10.69□□□□□ -0.7
CSNK2A1-201ENST00000217244 C9orf78Q9NZ63 289 aaPredicted RBP10.69□□□□□ -0.7
CSNK2A1-201ENST00000217244 TTC21BQ7Z4L5 1316 aa10.69□□□□□ -0.7
CSNK2A1-201ENST00000217244 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 HSPA2P54652 639 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 MPRIPQ6WCQ1 1025 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 EIF2AK4Q9P2K8 1649 aaKnown RBP10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 EIF4A2Q14240 407 aaKnown RBP10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 RAPGEF4Q8WZA2 1011 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 EXOC6BQ9Y2D4 811 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 ADCY10Q96PN6 1610 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 MAP4K4O95819 1239 aaPredicted RBP10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 TSHZ3Q63HK5 1081 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 CLASP1Q7Z460 1538 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 NFKBIBQ15653 356 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 PHF8Q9UPP1 1060 aa10.68□□□□□ -0.7
CSNK2A1-201ENST00000217244 IL1RAPL2Q9NP60 686 aa10.67□□□□□ -0.7
CSNK2A1-201ENST00000217244 POLR3AO14802 1390 aaPredicted RBP10.67□□□□□ -0.7
CSNK2A1-201ENST00000217244 EVA1CP58658 441 aa10.67□□□□□ -0.7
CSNK2A1-201ENST00000217244 CABLES1Q8TDN4 633 aa10.67□□□□□ -0.7
CSNK2A1-201ENST00000217244 LRRC59Q96AG4 307 aaKnown RBP10.67□□□□□ -0.7
CSNK2A1-201ENST00000217244 SEC24BO95487 1268 aa10.67□□□□□ -0.7
CSNK2A1-201ENST00000217244 CHRNA2Q15822 529 aa10.67□□□□□ -0.7
CSNK2A1-201ENST00000217244 MYL6BP14649 208 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 FGD1P98174 961 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 METP08581 1390 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 GAS2L2Q8NHY3 880 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 DDX17Q92841 729 aaKnown RBP10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 GOLGA6L22H0YM25 854 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 PLCB2Q00722 1185 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
CSNK2A1-201ENST00000217244 ANO2Q9NQ90 1003 aa10.65□□□□□ -0.7
CSNK2A1-201ENST00000217244 SURF6O75683 361 aaKnown RBP10.65□□□□□ -0.7
CSNK2A1-201ENST00000217244 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
CSNK2A1-201ENST00000217244 ANP32BQ92688 251 aaKnown RBP10.65□□□□□ -0.7
CSNK2A1-201ENST00000217244 CLTCL1P53675 1640 aa10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 UBTFL1P0CB47 393 aaPredicted RBP10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 PIP4K2AP48426 406 aaPredicted RBP10.64□□□□□ -0.71
CSNK2A1-201ENST00000217244 CHD1LQ86WJ1 897 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms