RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 FAM69CQ0P6D2 419 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 MINK1Q8N4C8 1332 aaPredicted RBP6.93□□□□□ -1.3
CBX5-201ENST00000209875 RALGAPBQ86X10 1494 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 RDXP35241 583 aaKnown RBP6.93□□□□□ -1.3
CBX5-201ENST00000209875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.93□□□□□ -1.3
CBX5-201ENST00000209875 CRBNQ96SW2 442 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 RUFY1Q96T51 708 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 RRP12Q5JTH9 1297 aaKnown RBP6.92□□□□□ -1.3
CBX5-201ENST00000209875 TCP11L2Q8N4U5 519 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 TSPYL4Q9UJ04 414 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 SMC3Q9UQE7 1217 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 SCAF11Q99590 1463 aaKnown RBP6.92□□□□□ -1.3
CBX5-201ENST00000209875 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 RTEL1-TNFRSF6BF6WH68 1400 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 AMER1Q5JTC6 1135 aaPredicted RBP6.92□□□□□ -1.3
CBX5-201ENST00000209875 RALYLQ86SE5 291 aaKnown RBP6.92□□□□□ -1.3
CBX5-201ENST00000209875 EXOC6Q8TAG9 804 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 CAVIN2O95810 425 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 DACH1Q9UI36 760 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 COG6Q9Y2V7 657 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 ZNF396Q96N95 335 aaPredicted RBP6.92□□□□□ -1.3
CBX5-201ENST00000209875 BICRAQ9NZM4 1560 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 HMGB1P1B2RPK0 211 aaPredicted RBP6.92□□□□□ -1.3
CBX5-201ENST00000209875 CAGE1Q8TC20 777 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 CTNNA3Q9UI47 895 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 TTC21BQ7Z4L5 1316 aa6.92□□□□□ -1.3
CBX5-201ENST00000209875 CAMSAP2Q08AD1 1489 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 G3V3G9 751 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 DCAF8Q5TAQ9 597 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 ARHGEF12Q9NZN5 1544 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 GNAI2P04899 355 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 CCDC146Q8IYE0 955 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
CBX5-201ENST00000209875 UHRF1BP1Q6BDS2 1440 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.91□□□□□ -1.3
CBX5-201ENST00000209875 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 CDKL5O76039 1030 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 AMOTQ4VCS5 1084 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 SPG7Q9UQ90 795 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 MYO18AQ92614 2054 aaKnown RBP6.91□□□□□ -1.3
CBX5-201ENST00000209875 TCOF1Q13428 1488 aaKnown RBP6.91□□□□□ -1.3
CBX5-201ENST00000209875 ABCC5O15440 1437 aa6.91□□□□□ -1.3
CBX5-201ENST00000209875 GOLGA6L7A0A1B0GV03 622 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 RAB11FIP3O75154 756 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 BCL11BQ9C0K0 894 aaPredicted RBP6.9□□□□□ -1.3
CBX5-201ENST00000209875 ANKRD36BQ8N2N9 1353 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.3
CBX5-201ENST00000209875 CCDC173Q0VFZ6 552 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 STK11IPQ8N1F8 1099 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 PDCL2Q8N4E4 241 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 ARHGAP45Q92619 1136 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 KIF2AO00139 706 aaPredicted RBP6.9□□□□□ -1.3
CBX5-201ENST00000209875 LRPPRCP42704 1394 aaKnown RBP6.9□□□□□ -1.3
CBX5-201ENST00000209875 TEX14Q8IWB6 1497 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 CCDC61Q9Y6R9 512 aa6.9□□□□□ -1.3
CBX5-201ENST00000209875 TPD52L1Q16890 204 aaPredicted RBP6.9□□□□□ -1.31
CBX5-201ENST00000209875 LUC7LQ9NQ29 371 aaKnown RBP6.9□□□□□ -1.31
CBX5-201ENST00000209875 IFT57Q9NWB7 429 aa6.9□□□□□ -1.31
CBX5-201ENST00000209875 NPC1L1Q9UHC9 1359 aa6.9□□□□□ -1.31
CBX5-201ENST00000209875 MARCH6O60337 910 aa6.9□□□□□ -1.31
CBX5-201ENST00000209875 ATF7IPQ6VMQ6 1270 aa6.9□□□□□ -1.31
CBX5-201ENST00000209875 WDR33Q9C0J8 1336 aaKnown RBP6.9□□□□□ -1.31
CBX5-201ENST00000209875 TPRNQ4KMQ1 711 aa6.9□□□□□ -1.31
CBX5-201ENST00000209875 EVA1CP58658 441 aa6.9□□□□□ -1.31
CBX5-201ENST00000209875 SASS6Q6UVJ0 657 aa6.9□□□□□ -1.31
CBX5-201ENST00000209875 TWISTNBQ3B726 338 aaPredicted RBP6.89□□□□□ -1.31
CBX5-201ENST00000209875 LEKR1Q6ZMV7 388 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 TATP17735 454 aaPredicted RBP6.89□□□□□ -1.31
CBX5-201ENST00000209875 MVPQ14764 893 aaKnown RBP6.89□□□□□ -1.31
CBX5-201ENST00000209875 WASF1Q92558 559 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 MTHFSP49914 203 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 ANKLE2Q86XL3 938 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 SPRYD3Q8NCJ5 442 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 NACAP1Q9BZK3 213 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 SOX12O15370 315 aa6.89□□□□□ -1.31
CBX5-201ENST00000209875 DENND4BO75064 1496 aaPredicted RBP6.89□□□□□ -1.31
CBX5-201ENST00000209875 ZNF644Q9H582 1327 aaPredicted RBP6.88□□□□□ -1.31
CBX5-201ENST00000209875 RILPL2Q969X0 211 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 FAM13BQ9NYF5 915 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 NLRP6P59044 892 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 ADGRL1O94910 1474 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 ADAMTS8Q9UP79 889 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 PTPN23Q9H3S7 1636 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 OLFM4Q6UX06 510 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 DUOX2Q9NRD8 1548 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 TXLNAP40222 546 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 NFE2L2Q16236 605 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 MNS1Q8NEH6 495 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 GTPBP4Q9BZE4 634 aaKnown RBP6.88□□□□□ -1.31
CBX5-201ENST00000209875 CFAP70Q5T0N1 1121 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 AFAP1Q8N556 730 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 TEX13AQ9BXU3 409 aaPredicted RBP6.88□□□□□ -1.31
CBX5-201ENST00000209875 TRIM34Q9BYJ4 488 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 INCENPQ9NQS7 918 aa6.88□□□□□ -1.31
CBX5-201ENST00000209875 APBB1O00213 710 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 TCEAL9Q9UHQ7 104 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 H0YHG0 523 aa6.87□□□□□ -1.31
CBX5-201ENST00000209875 PYM1Q9BRP8 204 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms