RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.32
LTBP4-201ENST00000204005 ANO2Q9NQ90 1003 aa23.26■■□□□ 1.31
LTBP4-201ENST00000204005 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
LTBP4-201ENST00000204005 MSH5O43196 834 aa23.26■■□□□ 1.31
LTBP4-201ENST00000204005 FOXD4L5Q5VV16 416 aaPredicted RBP23.26■■□□□ 1.31
LTBP4-201ENST00000204005 FOXD4L4Q8WXT5 416 aaPredicted RBP23.26■■□□□ 1.31
LTBP4-201ENST00000204005 ZNF530Q6P9A1 599 aaPredicted RBP23.26■■□□□ 1.31
LTBP4-201ENST00000204005 WWC1Q8IX03 1113 aa23.25■■□□□ 1.31
LTBP4-201ENST00000204005 HDGFL1Q5TGJ6 251 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 TMPOP42166 694 aaKnown RBP23.24■■□□□ 1.31
LTBP4-201ENST00000204005 NFE2L2Q16236 605 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 PDZRN3Q9UPQ7 1066 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 SLC4A2P04920 1241 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 ATP6V1DQ9Y5K8 247 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 SLFN5Q08AF3 891 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 MEX3CQ5U5Q3 659 aaKnown RBP23.24■■□□□ 1.31
LTBP4-201ENST00000204005 ATF7IPQ6VMQ6 1270 aa23.24■■□□□ 1.31
LTBP4-201ENST00000204005 NUP160Q12769 1436 aa23.23■■□□□ 1.31
LTBP4-201ENST00000204005 WASLO00401 505 aaPredicted RBP23.23■■□□□ 1.31
LTBP4-201ENST00000204005 CDC45O75419 566 aa23.22■■□□□ 1.31
LTBP4-201ENST00000204005 RNF20Q5VTR2 975 aa23.22■■□□□ 1.31
LTBP4-201ENST00000204005 A2MP01023 1474 aa23.22■■□□□ 1.31
LTBP4-201ENST00000204005 ZNF518AQ6AHZ1 1483 aa23.22■■□□□ 1.31
LTBP4-201ENST00000204005 GCC1Q96CN9 775 aa23.21■■□□□ 1.31
LTBP4-201ENST00000204005 FAM184AQ8NB25 1140 aa23.21■■□□□ 1.31
LTBP4-201ENST00000204005 AMOTL2Q9Y2J4 779 aa23.2■■□□□ 1.31
LTBP4-201ENST00000204005 KCNH5Q8NCM2 988 aa23.2■■□□□ 1.3
LTBP4-201ENST00000204005 H3BQV1 296 aa23.2■■□□□ 1.3
LTBP4-201ENST00000204005 IFFO2Q5TF58 517 aa23.2■■□□□ 1.3
LTBP4-201ENST00000204005 TRAPPC8Q9Y2L5 1435 aa23.19■■□□□ 1.3
LTBP4-201ENST00000204005 CEBPAP49715 358 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-201ENST00000204005 CLASRPQ8N2M8 674 aaKnown RBP23.19■■□□□ 1.3
LTBP4-201ENST00000204005 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
LTBP4-201ENST00000204005 SURF6O75683 361 aaKnown RBP23.19■■□□□ 1.3
LTBP4-201ENST00000204005 GNAI2P04899 355 aa23.19■■□□□ 1.3
LTBP4-201ENST00000204005 CCT4P50991 539 aaKnown RBP23.19■■□□□ 1.3
LTBP4-201ENST00000204005 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
LTBP4-201ENST00000204005 MVPQ14764 893 aaKnown RBP23.18■■□□□ 1.3
LTBP4-201ENST00000204005 SF3A1Q15459 793 aaKnown RBP23.18■■□□□ 1.3
LTBP4-201ENST00000204005 DISP3Q9P2K9 1392 aa23.17■■□□□ 1.3
LTBP4-201ENST00000204005 CPLX2Q6PUV4 134 aaKnown RBP23.17■■□□□ 1.3
LTBP4-201ENST00000204005 TOM1L2Q6ZVM7 507 aa23.17■■□□□ 1.3
LTBP4-201ENST00000204005 NME9Q86XW9 330 aa23.17■■□□□ 1.3
LTBP4-201ENST00000204005 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
LTBP4-201ENST00000204005 RALGAPBQ86X10 1494 aa23.16■■□□□ 1.3
LTBP4-201ENST00000204005 DISP1Q96F81 1524 aa23.16■■□□□ 1.3
LTBP4-201ENST00000204005 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
LTBP4-201ENST00000204005 NSD2O96028 1365 aa23.16■■□□□ 1.3
LTBP4-201ENST00000204005 TPM4P67936 248 aa23.16■■□□□ 1.3
LTBP4-201ENST00000204005 NUCB2P80303 420 aa23.16■■□□□ 1.3
LTBP4-201ENST00000204005 SHANK2Q9UPX8 1470 aa23.15■■□□□ 1.3
LTBP4-201ENST00000204005 NEUROD6Q96NK8 337 aa23.15■■□□□ 1.3
LTBP4-201ENST00000204005 C1orf115Q9H7X2 142 aa23.15■■□□□ 1.3
LTBP4-201ENST00000204005 SYNE3Q6ZMZ3 975 aa23.15■■□□□ 1.3
LTBP4-201ENST00000204005 VPS37DQ86XT2 251 aa23.14■■□□□ 1.3
LTBP4-201ENST00000204005 ABCC11Q96J66 1382 aa23.14■■□□□ 1.29
LTBP4-201ENST00000204005 XPCQ01831 940 aaPredicted RBP23.14■■□□□ 1.29
LTBP4-201ENST00000204005 APPP05067 770 aa23.13■■□□□ 1.29
LTBP4-201ENST00000204005 CABP4P57796 275 aa23.13■■□□□ 1.29
LTBP4-201ENST00000204005 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
LTBP4-201ENST00000204005 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
LTBP4-201ENST00000204005 HSP90AA2PQ14568 343 aaPredicted RBP23.13■■□□□ 1.29
LTBP4-201ENST00000204005 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
LTBP4-201ENST00000204005 SRCIN1Q9C0H9 1055 aa23.12■■□□□ 1.29
LTBP4-201ENST00000204005 NOL10Q9BSC4 688 aaKnown RBP23.12■■□□□ 1.29
LTBP4-201ENST00000204005 TNRQ92752 1358 aa23.12■■□□□ 1.29
LTBP4-201ENST00000204005 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
LTBP4-201ENST00000204005 AKAP17AQ02040 695 aaKnown RBP23.11■■□□□ 1.29
LTBP4-201ENST00000204005 TRDNQ13061 729 aa23.11■■□□□ 1.29
LTBP4-201ENST00000204005 CNTROBQ8N137 903 aa23.11■■□□□ 1.29
LTBP4-201ENST00000204005 MRE11P49959 708 aa23.11■■□□□ 1.29
LTBP4-201ENST00000204005 RBM42Q9BTD8 480 aaKnown RBP23.1■■□□□ 1.29
LTBP4-201ENST00000204005 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
LTBP4-201ENST00000204005 GNAT3A8MTJ3 354 aa23.1■■□□□ 1.29
LTBP4-201ENST00000204005 RASSF8Q8NHQ8 419 aa23.1■■□□□ 1.29
LTBP4-201ENST00000204005 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
LTBP4-201ENST00000204005 ERC1Q8IUD2 1116 aa23.1■■□□□ 1.29
LTBP4-201ENST00000204005 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
LTBP4-201ENST00000204005 ARID3AQ99856 593 aa23.09■■□□□ 1.29
LTBP4-201ENST00000204005 FOXD4L6Q3SYB3 417 aaPredicted RBP23.09■■□□□ 1.29
LTBP4-201ENST00000204005 FOXD4L3Q6VB84 417 aaPredicted RBP23.09■■□□□ 1.29
LTBP4-201ENST00000204005 EMILIN1Q9Y6C2 1016 aa23.09■■□□□ 1.29
LTBP4-201ENST00000204005 AMOTL1Q8IY63 956 aa23.09■■□□□ 1.29
LTBP4-201ENST00000204005 KIF6Q6ZMV9 814 aa23.09■■□□□ 1.29
LTBP4-201ENST00000204005 TRAK2O60296 914 aa23.08■■□□□ 1.29
LTBP4-201ENST00000204005 PBRM1Q86U86 1689 aa23.08■■□□□ 1.29
LTBP4-201ENST00000204005 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.28
LTBP4-201ENST00000204005 DDX54Q8TDD1 881 aaKnown RBP23.07■■□□□ 1.28
LTBP4-201ENST00000204005 CPLX1O14810 134 aa23.07■■□□□ 1.28
LTBP4-201ENST00000204005 IFT57Q9NWB7 429 aa23.07■■□□□ 1.28
LTBP4-201ENST00000204005 BTBD11A6QL63 1104 aa23.06■■□□□ 1.28
LTBP4-201ENST00000204005 THUMPD2Q9BTF0 503 aaKnown RBP23.06■■□□□ 1.28
LTBP4-201ENST00000204005 FSD1Q9BTV5 496 aa23.05■■□□□ 1.28
LTBP4-201ENST00000204005 C20orf194Q5TEA3 1177 aa23.05■■□□□ 1.28
LTBP4-201ENST00000204005 MCTP1Q6DN14 999 aa23.05■■□□□ 1.28
LTBP4-201ENST00000204005 UHRF1BP1LA0JNW5 1464 aa23.04■■□□□ 1.28
LTBP4-201ENST00000204005 SMC3Q9UQE7 1217 aa23.04■■□□□ 1.28
LTBP4-201ENST00000204005 RARSP54136 660 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms