RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 PDE3AQ14432 1141 aa23.47■■□□□ 1.35
SLC22A4-201ENST00000200652 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
SLC22A4-201ENST00000200652 PDE4AP27815 886 aa23.46■■□□□ 1.35
SLC22A4-201ENST00000200652 RARSP54136 660 aaKnown RBP23.46■■□□□ 1.35
SLC22A4-201ENST00000200652 SKAP1Q86WV1 359 aa23.46■■□□□ 1.35
SLC22A4-201ENST00000200652 MYH16Q9H6N6 1097 aa23.45■■□□□ 1.34
SLC22A4-201ENST00000200652 TMPOP42166 694 aaKnown RBP23.44■■□□□ 1.34
SLC22A4-201ENST00000200652 NUDT16Q96DE0 195 aaKnown RBP23.44■■□□□ 1.34
SLC22A4-201ENST00000200652 EDC4Q6P2E9 1401 aaKnown RBP23.44■■□□□ 1.34
SLC22A4-201ENST00000200652 ADAMTS13Q76LX8 1427 aa23.44■■□□□ 1.34
SLC22A4-201ENST00000200652 BACH2Q9BYV9 841 aa23.43■■□□□ 1.34
SLC22A4-201ENST00000200652 POLKQ9UBT6 870 aa23.43■■□□□ 1.34
SLC22A4-201ENST00000200652 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
SLC22A4-201ENST00000200652 MAPK8IP3Q9UPT6 1336 aa23.42■■□□□ 1.34
SLC22A4-201ENST00000200652 FBLN1P23142 703 aa23.42■■□□□ 1.34
SLC22A4-201ENST00000200652 CANXP27824 592 aaKnown RBP23.42■■□□□ 1.34
SLC22A4-201ENST00000200652 CDC42BPGQ6DT37 1551 aa23.42■■□□□ 1.34
SLC22A4-201ENST00000200652 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
SLC22A4-201ENST00000200652 ANP32AP39687 249 aaKnown RBP23.41■■□□□ 1.34
SLC22A4-201ENST00000200652 CCDC61Q9Y6R9 512 aa23.41■■□□□ 1.34
SLC22A4-201ENST00000200652 LTKP29376 864 aa23.4■■□□□ 1.34
SLC22A4-201ENST00000200652 CEBPAP49715 358 aaPredicted RBP23.4■■□□□ 1.34
SLC22A4-201ENST00000200652 ERICH6Q7L0X2 663 aa23.4■■□□□ 1.34
SLC22A4-201ENST00000200652 NCKAP5LQ9HCH0 1330 aa23.4■■□□□ 1.34
SLC22A4-201ENST00000200652 PANK1Q8TE04 598 aa23.4■■□□□ 1.34
SLC22A4-201ENST00000200652 MON2Q7Z3U7 1717 aa23.4■■□□□ 1.34
SLC22A4-201ENST00000200652 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
SLC22A4-201ENST00000200652 FRAT1Q92837 279 aaPredicted RBP23.39■■□□□ 1.34
SLC22A4-201ENST00000200652 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.34
SLC22A4-201ENST00000200652 PLEKHG1Q9ULL1 1385 aa23.39■■□□□ 1.33
SLC22A4-201ENST00000200652 NME9Q86XW9 330 aa23.39■■□□□ 1.33
SLC22A4-201ENST00000200652 AKAP12Q02952 1782 aa23.38■■□□□ 1.33
SLC22A4-201ENST00000200652 COG6Q9Y2V7 657 aa23.37■■□□□ 1.33
SLC22A4-201ENST00000200652 PPM1GO15355 546 aaPredicted RBP23.37■■□□□ 1.33
SLC22A4-201ENST00000200652 FCHSD2O94868 740 aa23.37■■□□□ 1.33
SLC22A4-201ENST00000200652 PRR36Q9H6K5 1346 aa23.36■■□□□ 1.33
SLC22A4-201ENST00000200652 ITSN1Q15811 1721 aa23.36■■□□□ 1.33
SLC22A4-201ENST00000200652 C3P01024 1663 aa23.36■■□□□ 1.33
SLC22A4-201ENST00000200652 RIPK4P57078 832 aa23.36■■□□□ 1.33
SLC22A4-201ENST00000200652 ZRANB1Q9UGI0 708 aa23.36■■□□□ 1.33
SLC22A4-201ENST00000200652 TSR2Q969E8 191 aaKnown RBP23.35■■□□□ 1.33
SLC22A4-201ENST00000200652 IPO9Q96P70 1041 aaKnown RBP23.35■■□□□ 1.33
SLC22A4-201ENST00000200652 LRRC7Q96NW7 1537 aa23.35■■□□□ 1.33
SLC22A4-201ENST00000200652 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.35■■□□□ 1.33
SLC22A4-201ENST00000200652 BCL2L13Q9BXK5 485 aa23.35■■□□□ 1.33
SLC22A4-201ENST00000200652 IL16Q14005 1332 aa23.34■■□□□ 1.33
SLC22A4-201ENST00000200652 CLUAP1Q96AJ1 413 aa23.34■■□□□ 1.33
SLC22A4-201ENST00000200652 CT47B1P0C2W7 299 aaPredicted RBP23.33■■□□□ 1.33
SLC22A4-201ENST00000200652 RSPH6AQ9H0K4 717 aa23.33■■□□□ 1.33
SLC22A4-201ENST00000200652 EMILIN1Q9Y6C2 1016 aa23.33■■□□□ 1.33
SLC22A4-201ENST00000200652 AATKQ6ZMQ8 1374 aa23.33■■□□□ 1.33
SLC22A4-201ENST00000200652 NOP58Q9Y2X3 529 aaKnown RBP23.33■■□□□ 1.33
SLC22A4-201ENST00000200652 ZNF692Q9BU19 519 aaPredicted RBP23.32■■□□□ 1.32
SLC22A4-201ENST00000200652 IGHDP01880 384 aa23.32■■□□□ 1.32
SLC22A4-201ENST00000200652 TNNQ9UQP3 1299 aa23.32■■□□□ 1.32
SLC22A4-201ENST00000200652 RLBP1P12271 317 aa23.31■■□□□ 1.32
SLC22A4-201ENST00000200652 EXOSC9Q06265 439 aaKnown RBP23.31■■□□□ 1.32
SLC22A4-201ENST00000200652 COG3Q96JB2 828 aa23.31■■□□□ 1.32
SLC22A4-201ENST00000200652 CDK12Q9NYV4 1490 aaPredicted RBP23.31■■□□□ 1.32
SLC22A4-201ENST00000200652 PRKAR2BP31323 418 aa23.31■■□□□ 1.32
SLC22A4-201ENST00000200652 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
SLC22A4-201ENST00000200652 PTPRUQ92729 1446 aa23.3■■□□□ 1.32
SLC22A4-201ENST00000200652 FER1L4A9Z1Z3 1794 aa23.3■■□□□ 1.32
SLC22A4-201ENST00000200652 SLC26A8Q96RN1 970 aa23.29■■□□□ 1.32
SLC22A4-201ENST00000200652 SLIT1O75093 1534 aa23.29■■□□□ 1.32
SLC22A4-201ENST00000200652 IL13P35225 146 aa23.29■■□□□ 1.32
SLC22A4-201ENST00000200652 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
SLC22A4-201ENST00000200652 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
SLC22A4-201ENST00000200652 PAK3O75914 559 aaPredicted RBP23.28■■□□□ 1.32
SLC22A4-201ENST00000200652 AAMPQ13685 434 aa23.28■■□□□ 1.32
SLC22A4-201ENST00000200652 NPM2Q86SE8 214 aaKnown RBP23.28■■□□□ 1.32
SLC22A4-201ENST00000200652 HMOX1P09601 288 aa23.27■■□□□ 1.31
SLC22A4-201ENST00000200652 NEFMP07197 916 aa23.26■■□□□ 1.31
SLC22A4-201ENST00000200652 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
SLC22A4-201ENST00000200652 RRS1Q15050 365 aaKnown RBP23.25■■□□□ 1.31
SLC22A4-201ENST00000200652 ZKSCAN2Q63HK3 967 aa23.25■■□□□ 1.31
SLC22A4-201ENST00000200652 PHACTR3Q96KR7 559 aa23.25■■□□□ 1.31
SLC22A4-201ENST00000200652 NRKQ7Z2Y5 1582 aa23.25■■□□□ 1.31
SLC22A4-201ENST00000200652 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
SLC22A4-201ENST00000200652 RGS3P49796 1198 aa23.24■■□□□ 1.31
SLC22A4-201ENST00000200652 ACEP12821 1306 aa23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 NFE2L2Q16236 605 aa23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 ZBTB47Q9UFB7 747 aaPredicted RBP23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 TBX22Q9Y458 520 aa23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 TTC21BQ7Z4L5 1316 aa23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 SSH1Q8WYL5 1049 aa23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 AMOTL2Q9Y2J4 779 aa23.23■■□□□ 1.31
SLC22A4-201ENST00000200652 NUTM2FA1L443 756 aa23.22■■□□□ 1.31
SLC22A4-201ENST00000200652 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
SLC22A4-201ENST00000200652 PCDHB15Q9Y5E8 787 aa23.21■■□□□ 1.31
SLC22A4-201ENST00000200652 MVPQ14764 893 aaKnown RBP23.2■■□□□ 1.3
SLC22A4-201ENST00000200652 DZIP1LQ8IYY4 767 aaKnown RBP23.2■■□□□ 1.3
SLC22A4-201ENST00000200652 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
SLC22A4-201ENST00000200652 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
SLC22A4-201ENST00000200652 C8orf34Q49A92 452 aa23.2■■□□□ 1.3
SLC22A4-201ENST00000200652 USP6P35125 1406 aa23.18■■□□□ 1.3
SLC22A4-201ENST00000200652 FTSJ3Q8IY81 847 aaKnown RBP23.18■■□□□ 1.3
SLC22A4-201ENST00000200652 PTCH1Q13635 1447 aa23.17■■□□□ 1.3
SLC22A4-201ENST00000200652 OVOS2A0A0J9YW53 1432 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms