RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 RRP9O43818 475 aaKnown RBP13.14□□□□□ -0.31
CHERP-201ENST00000198939 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
CHERP-201ENST00000198939 EVC2Q86UK5 1308 aa13.14□□□□□ -0.31
CHERP-201ENST00000198939 CPS1P31327 1500 aa13.13□□□□□ -0.31
CHERP-201ENST00000198939 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
CHERP-201ENST00000198939 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
CHERP-201ENST00000198939 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
CHERP-201ENST00000198939 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
CHERP-201ENST00000198939 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
CHERP-201ENST00000198939 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
CHERP-201ENST00000198939 ASXL1Q8IXJ9 1541 aa13.11□□□□□ -0.31
CHERP-201ENST00000198939 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
CHERP-201ENST00000198939 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
CHERP-201ENST00000198939 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
CHERP-201ENST00000198939 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
CHERP-201ENST00000198939 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
CHERP-201ENST00000198939 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
CHERP-201ENST00000198939 CHD2O14647 1828 aaKnown RBP13.1□□□□□ -0.31
CHERP-201ENST00000198939 C19orf44Q9H6X5 657 aa13.1□□□□□ -0.31
CHERP-201ENST00000198939 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
CHERP-201ENST00000198939 WAPLQ7Z5K2 1190 aa13.1□□□□□ -0.31
CHERP-201ENST00000198939 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHERP-201ENST00000198939 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
CHERP-201ENST00000198939 ATF3P18847 181 aa13.09□□□□□ -0.31
CHERP-201ENST00000198939 MSH6P52701 1360 aa13.09□□□□□ -0.31
CHERP-201ENST00000198939 MINK1Q8N4C8 1332 aaPredicted RBP13.09□□□□□ -0.31
CHERP-201ENST00000198939 XRN1Q8IZH2 1706 aaKnown RBP13.09□□□□□ -0.31
CHERP-201ENST00000198939 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
CHERP-201ENST00000198939 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
CHERP-201ENST00000198939 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
CHERP-201ENST00000198939 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
CHERP-201ENST00000198939 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
CHERP-201ENST00000198939 CLCN1P35523 988 aa13.07□□□□□ -0.32
CHERP-201ENST00000198939 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
CHERP-201ENST00000198939 CDK19Q9BWU1 502 aa13.06□□□□□ -0.32
CHERP-201ENST00000198939 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
CHERP-201ENST00000198939 TESK2Q96S53 571 aa13.05□□□□□ -0.32
CHERP-201ENST00000198939 KDM2BQ8NHM5 1336 aa13.05□□□□□ -0.32
CHERP-201ENST00000198939 DCCP43146 1447 aa13.05□□□□□ -0.32
CHERP-201ENST00000198939 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
CHERP-201ENST00000198939 XRCC6P12956 609 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHERP-201ENST00000198939 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
CHERP-201ENST00000198939 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
CHERP-201ENST00000198939 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
CHERP-201ENST00000198939 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
CHERP-201ENST00000198939 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
CHERP-201ENST00000198939 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
CHERP-201ENST00000198939 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHERP-201ENST00000198939 PANK2Q9BZ23 570 aa13.02□□□□□ -0.33
CHERP-201ENST00000198939 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.33
CHERP-201ENST00000198939 ANKARQ7Z5J8 1434 aa13.01□□□□□ -0.33
CHERP-201ENST00000198939 IQSEC2Q5JU85 1478 aa13.01□□□□□ -0.33
CHERP-201ENST00000198939 TOM1O60784 492 aa13.01□□□□□ -0.33
CHERP-201ENST00000198939 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
CHERP-201ENST00000198939 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
CHERP-201ENST00000198939 ADGRB2O60241 1585 aa13□□□□□ -0.33
CHERP-201ENST00000198939 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
CHERP-201ENST00000198939 HDGFL2Q7Z4V5 671 aaPredicted RBP13□□□□□ -0.33
CHERP-201ENST00000198939 MRE11P49959 708 aa13□□□□□ -0.33
CHERP-201ENST00000198939 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
CHERP-201ENST00000198939 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
CHERP-201ENST00000198939 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
CHERP-201ENST00000198939 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
CHERP-201ENST00000198939 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
CHERP-201ENST00000198939 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
CHERP-201ENST00000198939 ESPNB1AK53 854 aa12.98□□□□□ -0.33
CHERP-201ENST00000198939 LTBP4Q8N2S1 1624 aa12.98□□□□□ -0.33
CHERP-201ENST00000198939 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
CHERP-201ENST00000198939 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
CHERP-201ENST00000198939 DISP3Q9P2K9 1392 aa12.97□□□□□ -0.33
CHERP-201ENST00000198939 MCM4P33991 863 aa12.97□□□□□ -0.33
CHERP-201ENST00000198939 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
CHERP-201ENST00000198939 TRAK2O60296 914 aa12.96□□□□□ -0.33
CHERP-201ENST00000198939 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
CHERP-201ENST00000198939 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
CHERP-201ENST00000198939 NGDNQ8NEJ9 315 aaKnown RBP12.96□□□□□ -0.33
CHERP-201ENST00000198939 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.34
CHERP-201ENST00000198939 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
CHERP-201ENST00000198939 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
CHERP-201ENST00000198939 PSME1Q06323 249 aa12.95□□□□□ -0.34
CHERP-201ENST00000198939 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
CHERP-201ENST00000198939 TPM2P07951 284 aa12.95□□□□□ -0.34
CHERP-201ENST00000198939 STRCP1A6NGW2 1772 aa12.95□□□□□ -0.34
CHERP-201ENST00000198939 SEC24BO95487 1268 aa12.94□□□□□ -0.34
CHERP-201ENST00000198939 ZBTB7CA1YPR0 619 aa12.94□□□□□ -0.34
CHERP-201ENST00000198939 CABP1Q9NZU7 370 aa12.94□□□□□ -0.34
CHERP-201ENST00000198939 GRPEL1Q9HAV7 217 aa12.94□□□□□ -0.34
CHERP-201ENST00000198939 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
CHERP-201ENST00000198939 PDCL3Q9H2J4 239 aa12.93□□□□□ -0.34
CHERP-201ENST00000198939 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
CHERP-201ENST00000198939 UBAP1LF5GYI3 381 aa12.93□□□□□ -0.34
CHERP-201ENST00000198939 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
CHERP-201ENST00000198939 PARD3Q8TEW0 1356 aa12.93□□□□□ -0.34
CHERP-201ENST00000198939 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
CHERP-201ENST00000198939 C1orf167Q5SNV9 1468 aa12.92□□□□□ -0.34
CHERP-201ENST00000198939 DNTTIP2Q5QJE6 756 aaKnown RBP12.92□□□□□ -0.34
CHERP-201ENST00000198939 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
CHERP-201ENST00000198939 CDK11BP21127 795 aaKnown RBP12.92□□□□□ -0.34
CHERP-201ENST00000198939 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
CHERP-201ENST00000198939 PANK3Q9H999 370 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms