RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 NKTRP30414 1462 aaKnown RBP24.56■■□□□ 1.52
CTSA-201ENST00000191018 RCAN3Q9UKA8 241 aa24.55■■□□□ 1.52
CTSA-201ENST00000191018 MAP2P11137 1827 aaKnown RBP24.55■■□□□ 1.52
CTSA-201ENST00000191018 RUNDC1Q96C34 613 aa24.55■■□□□ 1.52
CTSA-201ENST00000191018 KCNA6P17658 529 aa24.54■■□□□ 1.52
CTSA-201ENST00000191018 GOLGA2Q08379 1002 aa24.54■■□□□ 1.52
CTSA-201ENST00000191018 RGPD8O14715 1765 aaPredicted RBP24.53■■□□□ 1.52
CTSA-201ENST00000191018 DUSP27Q5VZP5 1158 aa24.52■■□□□ 1.52
CTSA-201ENST00000191018 NME9Q86XW9 330 aa24.51■■□□□ 1.51
CTSA-201ENST00000191018 TRMT2AQ8IZ69 625 aaKnown RBP24.51■■□□□ 1.51
CTSA-201ENST00000191018 PELP1Q8IZL8 1130 aaKnown RBP24.51■■□□□ 1.51
CTSA-201ENST00000191018 PPP4R2Q9NY27 417 aa24.51■■□□□ 1.51
CTSA-201ENST00000191018 SLFN5Q08AF3 891 aa24.5■■□□□ 1.51
CTSA-201ENST00000191018 ACEP12821 1306 aa24.5■■□□□ 1.51
CTSA-201ENST00000191018 FMN2Q9NZ56 1722 aa24.5■■□□□ 1.51
CTSA-201ENST00000191018 AATKQ6ZMQ8 1374 aa24.5■■□□□ 1.51
CTSA-201ENST00000191018 USP6P35125 1406 aa24.5■■□□□ 1.51
CTSA-201ENST00000191018 POLKQ9UBT6 870 aa24.49■■□□□ 1.51
CTSA-201ENST00000191018 U2AF1L5P0DN76 240 aaPredicted RBP24.48■■□□□ 1.51
CTSA-201ENST00000191018 RRP1P56182 461 aaKnown RBP24.48■■□□□ 1.51
CTSA-201ENST00000191018 U2AF1Q01081 240 aaKnown RBP eCLIP24.48■■□□□ 1.51
CTSA-201ENST00000191018 NCBP3Q53F19 620 aaKnown RBP24.48■■□□□ 1.51
CTSA-201ENST00000191018 SSH2Q76I76 1423 aa24.48■■□□□ 1.51
CTSA-201ENST00000191018 ANKARQ7Z5J8 1434 aa24.48■■□□□ 1.51
CTSA-201ENST00000191018 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
CTSA-201ENST00000191018 NPHP4O75161 1426 aaPredicted RBP24.47■■□□□ 1.51
CTSA-201ENST00000191018 NALCNQ8IZF0 1738 aa24.47■■□□□ 1.51
CTSA-201ENST00000191018 NUTM2FA1L443 756 aa24.47■■□□□ 1.51
CTSA-201ENST00000191018 TCP11L2Q8N4U5 519 aa24.47■■□□□ 1.51
CTSA-201ENST00000191018 ZRANB1Q9UGI0 708 aa24.46■■□□□ 1.51
CTSA-201ENST00000191018 TTC21BQ7Z4L5 1316 aa24.46■■□□□ 1.51
CTSA-201ENST00000191018 COG3Q96JB2 828 aa24.45■■□□□ 1.51
CTSA-201ENST00000191018 DIAPH1O60610 1272 aaKnown RBP24.45■■□□□ 1.5
CTSA-201ENST00000191018 WWC1Q8IX03 1113 aa24.45■■□□□ 1.5
CTSA-201ENST00000191018 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
CTSA-201ENST00000191018 OVOS2A0A0J9YW53 1432 aa24.43■■□□□ 1.5
CTSA-201ENST00000191018 OVOS2Q6IE36 1432 aa24.43■■□□□ 1.5
CTSA-201ENST00000191018 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
CTSA-201ENST00000191018 SPINK5Q9NQ38 1064 aaPredicted RBP24.43■■□□□ 1.5
CTSA-201ENST00000191018 E9PSI1 815 aa24.43■■□□□ 1.5
CTSA-201ENST00000191018 FBLN1P23142 703 aa24.43■■□□□ 1.5
CTSA-201ENST00000191018 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
CTSA-201ENST00000191018 U2SURPO15042 1029 aaKnown RBP24.41■■□□□ 1.5
CTSA-201ENST00000191018 DMRT2Q9Y5R5 561 aa24.41■■□□□ 1.5
CTSA-201ENST00000191018 NWD1Q149M9 1564 aa24.4■■□□□ 1.5
CTSA-201ENST00000191018 EMILIN1Q9Y6C2 1016 aa24.38■■□□□ 1.49
CTSA-201ENST00000191018 TTC21AQ8NDW8 1320 aa24.38■■□□□ 1.49
CTSA-201ENST00000191018 RRP7AQ9Y3A4 280 aaKnown RBP24.38■■□□□ 1.49
CTSA-201ENST00000191018 WDR63Q8IWG1 891 aa24.37■■□□□ 1.49
CTSA-201ENST00000191018 PMFBP1Q8TBY8 1022 aa24.37■■□□□ 1.49
CTSA-201ENST00000191018 USP31Q70CQ4 1352 aa24.36■■□□□ 1.49
CTSA-201ENST00000191018 LRRC7Q96NW7 1537 aa24.36■■□□□ 1.49
CTSA-201ENST00000191018 ADGRL3Q9HAR2 1447 aa24.36■■□□□ 1.49
CTSA-201ENST00000191018 NEUROD2Q15784 382 aa24.35■■□□□ 1.49
CTSA-201ENST00000191018 PPM1GO15355 546 aaPredicted RBP24.34■■□□□ 1.49
CTSA-201ENST00000191018 PNNQ9H307 717 aaKnown RBP24.34■■□□□ 1.49
CTSA-201ENST00000191018 PIK3C2AO00443 1686 aa24.34■■□□□ 1.49
CTSA-201ENST00000191018 FCHSD2O94868 740 aa24.34■■□□□ 1.49
CTSA-201ENST00000191018 IL13P35225 146 aa24.33■■□□□ 1.49
CTSA-201ENST00000191018 NGDNQ8NEJ9 315 aaKnown RBP24.33■■□□□ 1.49
CTSA-201ENST00000191018 USP54Q70EL1 1684 aa24.32■■□□□ 1.48
CTSA-201ENST00000191018 RRS1Q15050 365 aaKnown RBP24.32■■□□□ 1.48
CTSA-201ENST00000191018 B4GALNT3Q6L9W6 998 aa24.32■■□□□ 1.48
CTSA-201ENST00000191018 TMPOP42166 694 aaKnown RBP24.31■■□□□ 1.48
CTSA-201ENST00000191018 MAPK8IP3Q9UPT6 1336 aa24.31■■□□□ 1.48
CTSA-201ENST00000191018 RSPH6AQ9H0K4 717 aa24.3■■□□□ 1.48
CTSA-201ENST00000191018 PEAK1Q9H792 1746 aa24.3■■□□□ 1.48
CTSA-201ENST00000191018 MARF1Q9Y4F3 1742 aaKnown RBP24.29■■□□□ 1.48
CTSA-201ENST00000191018 PLIN1O60240 522 aa24.27■■□□□ 1.48
CTSA-201ENST00000191018 EXOC6Q8TAG9 804 aa24.26■■□□□ 1.47
CTSA-201ENST00000191018 TRIM35Q9UPQ4 493 aa24.26■■□□□ 1.47
CTSA-201ENST00000191018 RBM33Q96EV2 1170 aaKnown RBP24.26■■□□□ 1.47
CTSA-201ENST00000191018 PRKAR2BP31323 418 aa24.24■■□□□ 1.47
CTSA-201ENST00000191018 RGPD1P0DJD0 1748 aa24.23■■□□□ 1.47
CTSA-201ENST00000191018 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
CTSA-201ENST00000191018 CCDC136Q96JN2 1154 aa24.21■■□□□ 1.47
CTSA-201ENST00000191018 MYH16Q9H6N6 1097 aa24.21■■□□□ 1.47
CTSA-201ENST00000191018 IL16Q14005 1332 aa24.21■■□□□ 1.47
CTSA-201ENST00000191018 RIPK4P57078 832 aa24.21■■□□□ 1.47
CTSA-201ENST00000191018 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.21■■□□□ 1.47
CTSA-201ENST00000191018 TSHZ2Q9NRE2 1034 aa24.21■■□□□ 1.47
CTSA-201ENST00000191018 HMOX1P09601 288 aa24.2■■□□□ 1.46
CTSA-201ENST00000191018 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
CTSA-201ENST00000191018 NEFMP07197 916 aa24.18■■□□□ 1.46
CTSA-201ENST00000191018 PHACTR3Q96KR7 559 aa24.18■■□□□ 1.46
CTSA-201ENST00000191018 STRCP1A6NGW2 1772 aa24.18■■□□□ 1.46
CTSA-201ENST00000191018 MAP3K19Q56UN5 1328 aa24.18■■□□□ 1.46
CTSA-201ENST00000191018 DLG5Q8TDM6 1919 aa24.18■■□□□ 1.46
CTSA-201ENST00000191018 SBNO1A3KN83 1393 aa24.18■■□□□ 1.46
CTSA-201ENST00000191018 C20orf194Q5TEA3 1177 aa24.17■■□□□ 1.46
CTSA-201ENST00000191018 CRBNQ96SW2 442 aa24.17■■□□□ 1.46
CTSA-201ENST00000191018 BCAR3O75815 825 aa24.17■■□□□ 1.46
CTSA-201ENST00000191018 NFE2L2Q16236 605 aa24.17■■□□□ 1.46
CTSA-201ENST00000191018 NLRP6P59044 892 aa24.16■■□□□ 1.46
CTSA-201ENST00000191018 FLT4P35916 1363 aa24.16■■□□□ 1.46
CTSA-201ENST00000191018 HSP90AB2PQ58FF8 381 aa24.15■■□□□ 1.46
CTSA-201ENST00000191018 PROSER2Q86WR7 435 aaPredicted RBP24.15■■□□□ 1.46
CTSA-201ENST00000191018 FANCIQ9NVI1 1328 aa24.15■■□□□ 1.46
CTSA-201ENST00000191018 C14orf37Q86TY3 774 aa24.14■■□□□ 1.45
CTSA-201ENST00000191018 KIF24Q5T7B8 1368 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms