RNA–Protein interactions for RNA: ENST00000044462.11

PSMA4-201, Transcript of proteasome subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA4, Length 4,411 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-201ENST00000044462 COL18A1P39060 1754 aa6.63□□□□□ -1.35
PSMA4-201ENST00000044462 SOX12O15370 315 aa6.63□□□□□ -1.35
PSMA4-201ENST00000044462 APPP05067 770 aa6.63□□□□□ -1.35
PSMA4-201ENST00000044462 DDX10Q13206 875 aaKnown RBP6.62□□□□□ -1.35
PSMA4-201ENST00000044462 PHF23Q9BUL5 403 aaPredicted RBP6.62□□□□□ -1.35
PSMA4-201ENST00000044462 NKTRP30414 1462 aaKnown RBP6.62□□□□□ -1.35
PSMA4-201ENST00000044462 POGKQ9P215 609 aa6.62□□□□□ -1.35
PSMA4-201ENST00000044462 ANP32BQ92688 251 aaKnown RBP6.62□□□□□ -1.35
PSMA4-201ENST00000044462 PTPRUQ92729 1446 aa6.62□□□□□ -1.35
PSMA4-201ENST00000044462 HDGFP51858 240 aaKnown RBP6.62□□□□□ -1.35
PSMA4-201ENST00000044462 SLC26A8Q96RN1 970 aa6.62□□□□□ -1.35
PSMA4-201ENST00000044462 FBXO31Q5XUX0 539 aaPredicted RBP6.61□□□□□ -1.35
PSMA4-201ENST00000044462 RGPD2P0DJD1 1756 aa6.61□□□□□ -1.35
PSMA4-201ENST00000044462 ADGRF5Q8IZF2 1346 aa6.61□□□□□ -1.35
PSMA4-201ENST00000044462 CCER2I3L3R5 266 aa6.61□□□□□ -1.35
PSMA4-201ENST00000044462 ATP7BP35670 1465 aa6.61□□□□□ -1.35
PSMA4-201ENST00000044462 PRDM10Q9NQV6 1147 aa6.6□□□□□ -1.35
PSMA4-201ENST00000044462 LTN1O94822 1766 aa6.6□□□□□ -1.35
PSMA4-201ENST00000044462 DNTTIP2Q5QJE6 756 aaKnown RBP6.6□□□□□ -1.35
PSMA4-201ENST00000044462 TXNDC2Q86VQ3 553 aa6.6□□□□□ -1.35
PSMA4-201ENST00000044462 ZNF521Q96K83 1311 aa6.6□□□□□ -1.35
PSMA4-201ENST00000044462 CCDC9Q9Y3X0 531 aaKnown RBP6.6□□□□□ -1.35
PSMA4-201ENST00000044462 MST1RQ04912 1400 aa6.59□□□□□ -1.35
PSMA4-201ENST00000044462 CPSF1Q10570 1443 aaKnown RBP6.59□□□□□ -1.35
PSMA4-201ENST00000044462 WNK3Q9BYP7 1800 aa6.59□□□□□ -1.35
PSMA4-201ENST00000044462 TMC1Q8TDI8 760 aa6.59□□□□□ -1.35
PSMA4-201ENST00000044462 FAM208AQ9UK61 1670 aaKnown RBP6.59□□□□□ -1.36
PSMA4-201ENST00000044462 YTHDC2Q9H6S0 1430 aaKnown RBP6.58□□□□□ -1.36
PSMA4-201ENST00000044462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.58□□□□□ -1.36
PSMA4-201ENST00000044462 PRKRIP1Q9H875 184 aaPredicted RBP6.58□□□□□ -1.36
PSMA4-201ENST00000044462 DCAF11Q8TEB1 546 aa6.58□□□□□ -1.36
PSMA4-201ENST00000044462 MED1Q15648 1581 aaPredicted RBP6.58□□□□□ -1.36
PSMA4-201ENST00000044462 HNRNPUQ00839 825 aaKnown RBP eCLIP6.57□□□□□ -1.36
PSMA4-201ENST00000044462 PROSER2Q86WR7 435 aaPredicted RBP6.57□□□□□ -1.36
PSMA4-201ENST00000044462 UBAP1LF5GYI3 381 aa6.57□□□□□ -1.36
PSMA4-201ENST00000044462 FAM13BQ9NYF5 915 aa6.57□□□□□ -1.36
PSMA4-201ENST00000044462 RGPD5Q99666 1765 aa6.57□□□□□ -1.36
PSMA4-201ENST00000044462 KTN1Q86UP2 1357 aaKnown RBP6.56□□□□□ -1.36
PSMA4-201ENST00000044462 SLC4A3P48751 1232 aa6.56□□□□□ -1.36
PSMA4-201ENST00000044462 ANKLE2Q86XL3 938 aa6.56□□□□□ -1.36
PSMA4-201ENST00000044462 THEMISQ8N1K5 641 aaPredicted RBP6.56□□□□□ -1.36
PSMA4-201ENST00000044462 NUTM2BA6NNL0 878 aaPredicted RBP6.56□□□□□ -1.36
PSMA4-201ENST00000044462 NUTM2EB1AL46 878 aaPredicted RBP6.56□□□□□ -1.36
PSMA4-201ENST00000044462 MEX3CQ5U5Q3 659 aaKnown RBP6.56□□□□□ -1.36
PSMA4-201ENST00000044462 NUTM2AQ8IVF1 878 aaPredicted RBP6.56□□□□□ -1.36
PSMA4-201ENST00000044462 C14orf93Q9H972 538 aaKnown RBP6.56□□□□□ -1.36
PSMA4-201ENST00000044462 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.55□□□□□ -1.36
PSMA4-201ENST00000044462 WWC1Q8IX03 1113 aa6.55□□□□□ -1.36
PSMA4-201ENST00000044462 PTCH1Q13635 1447 aa6.55□□□□□ -1.36
PSMA4-201ENST00000044462 KDM3BQ7LBC6 1761 aa6.55□□□□□ -1.36
PSMA4-201ENST00000044462 EIF4G2P78344 907 aaKnown RBP eCLIP6.55□□□□□ -1.36
PSMA4-201ENST00000044462 GZF1Q9H116 711 aaPredicted RBP6.55□□□□□ -1.36
PSMA4-201ENST00000044462 PNPLA6Q8IY17 1366 aa6.55□□□□□ -1.36
PSMA4-201ENST00000044462 NCAPD2Q15021 1401 aa6.55□□□□□ -1.36
PSMA4-201ENST00000044462 NFAT5O94916 1531 aa6.55□□□□□ -1.36
PSMA4-201ENST00000044462 CARD14Q9BXL6 1004 aa6.54□□□□□ -1.36
PSMA4-201ENST00000044462 PPP6R1Q9UPN7 881 aa6.54□□□□□ -1.36
PSMA4-201ENST00000044462 FAM135BQ49AJ0 1406 aa6.54□□□□□ -1.36
PSMA4-201ENST00000044462 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
PSMA4-201ENST00000044462 CERS3Q8IU89 383 aa6.54□□□□□ -1.36
PSMA4-201ENST00000044462 HOMEZQ8IX15 550 aa6.54□□□□□ -1.36
PSMA4-201ENST00000044462 PAPPAQ13219 1627 aa6.54□□□□□ -1.36
PSMA4-201ENST00000044462 STAC3Q96MF2 364 aa6.54□□□□□ -1.36
PSMA4-201ENST00000044462 ROCK2O75116 1388 aaKnown RBP6.54□□□□□ -1.36
PSMA4-201ENST00000044462 TRIM44Q96DX7 344 aaPredicted RBP6.53□□□□□ -1.36
PSMA4-201ENST00000044462 LMTK3Q96Q04 1460 aa6.53□□□□□ -1.36
PSMA4-201ENST00000044462 ZFP91Q96JP5 570 aaPredicted RBP6.53□□□□□ -1.36
PSMA4-201ENST00000044462 ATF3P18847 181 aa6.53□□□□□ -1.36
PSMA4-201ENST00000044462 BRD2P25440 801 aaKnown RBP6.53□□□□□ -1.36
PSMA4-201ENST00000044462 SRPK2P78362 688 aaKnown RBP6.53□□□□□ -1.36
PSMA4-201ENST00000044462 GSE1Q14687 1217 aa6.53□□□□□ -1.36
PSMA4-201ENST00000044462 ST20-MTHFSA0A0A6YYL1 179 aa6.53□□□□□ -1.36
PSMA4-201ENST00000044462 TPRNQ4KMQ1 711 aa6.53□□□□□ -1.36
PSMA4-201ENST00000044462 FANCIQ9NVI1 1328 aa6.52□□□□□ -1.37
PSMA4-201ENST00000044462 PARP4Q9UKK3 1724 aaKnown RBP6.52□□□□□ -1.37
PSMA4-201ENST00000044462 NCKAP5LQ9HCH0 1330 aa6.52□□□□□ -1.37
PSMA4-201ENST00000044462 PNISRQ8TF01 805 aaKnown RBP6.52□□□□□ -1.37
PSMA4-201ENST00000044462 TAOK2Q9UL54 1235 aa6.52□□□□□ -1.37
PSMA4-201ENST00000044462 TRAK1Q9UPV9 953 aa6.52□□□□□ -1.37
PSMA4-201ENST00000044462 SETD1BQ9UPS6 1966 aaKnown RBP6.52□□□□□ -1.37
PSMA4-201ENST00000044462 NCLP19338 710 aaKnown RBP6.52□□□□□ -1.37
PSMA4-201ENST00000044462 CASZ1Q86V15 1759 aa6.52□□□□□ -1.37
PSMA4-201ENST00000044462 METP08581 1390 aa6.52□□□□□ -1.37
PSMA4-201ENST00000044462 PKD1L3Q7Z443 1732 aa6.51□□□□□ -1.37
PSMA4-201ENST00000044462 ABCC11Q96J66 1382 aa6.51□□□□□ -1.37
PSMA4-201ENST00000044462 RBM25P49756 843 aaKnown RBP6.51□□□□□ -1.37
PSMA4-201ENST00000044462 FRAT1Q92837 279 aaPredicted RBP6.51□□□□□ -1.37
PSMA4-201ENST00000044462 NHSL1Q5SYE7 1610 aa6.51□□□□□ -1.37
PSMA4-201ENST00000044462 UBR2Q8IWV8 1755 aa6.51□□□□□ -1.37
PSMA4-201ENST00000044462 TRMT2AQ8IZ69 625 aaKnown RBP6.51□□□□□ -1.37
PSMA4-201ENST00000044462 PUS7Q96PZ0 661 aaKnown RBP6.51□□□□□ -1.37
PSMA4-201ENST00000044462 DMRT2Q9Y5R5 561 aa6.51□□□□□ -1.37
PSMA4-201ENST00000044462 RPGRIP1LQ68CZ1 1315 aa6.51□□□□□ -1.37
PSMA4-201ENST00000044462 TMEM132EQ6IEE7 984 aa6.5□□□□□ -1.37
PSMA4-201ENST00000044462 BRD4O60885 1362 aaPredicted RBP6.5□□□□□ -1.37
PSMA4-201ENST00000044462 SLIT3O75094 1523 aa6.5□□□□□ -1.37
PSMA4-201ENST00000044462 EP400Q96L91 3159 aa6.5□□□□□ -1.37
PSMA4-201ENST00000044462 XPCQ01831 940 aaPredicted RBP6.5□□□□□ -1.37
PSMA4-201ENST00000044462 CNPY4Q8N129 248 aa6.5□□□□□ -1.37
PSMA4-201ENST00000044462 OVOS2A0A0J9YW53 1432 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms