RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 FAM9BQ8IZU0 186 aa25.85■■□□□ 1.73
IFRD1-201ENST00000005558 C1orf167Q5SNV9 1468 aa25.85■■□□□ 1.73
IFRD1-201ENST00000005558 ORAI2Q96SN7 254 aa25.84■■□□□ 1.73
IFRD1-201ENST00000005558 DMRT2Q9Y5R5 561 aa25.84■■□□□ 1.73
IFRD1-201ENST00000005558 TNNT2P45379 298 aaPredicted RBP25.84■■□□□ 1.73
IFRD1-201ENST00000005558 PHF8Q9UPP1 1060 aa25.84■■□□□ 1.73
IFRD1-201ENST00000005558 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
IFRD1-201ENST00000005558 MARF1Q9Y4F3 1742 aaKnown RBP25.8■■□□□ 1.72
IFRD1-201ENST00000005558 PIK3C2AO00443 1686 aa25.8■■□□□ 1.72
IFRD1-201ENST00000005558 FBLN1P23142 703 aa25.79■■□□□ 1.72
IFRD1-201ENST00000005558 ESCO1Q5FWF5 840 aa25.79■■□□□ 1.72
IFRD1-201ENST00000005558 OVOS2A0A0J9YW53 1432 aa25.79■■□□□ 1.72
IFRD1-201ENST00000005558 OVOS2Q6IE36 1432 aa25.79■■□□□ 1.72
IFRD1-201ENST00000005558 SHPRHQ149N8 1683 aa25.77■■□□□ 1.72
IFRD1-201ENST00000005558 MTHFSP49914 203 aa25.77■■□□□ 1.72
IFRD1-201ENST00000005558 LTBP4Q8N2S1 1624 aa25.76■■□□□ 1.71
IFRD1-201ENST00000005558 MAP2P11137 1827 aaKnown RBP25.76■■□□□ 1.71
IFRD1-201ENST00000005558 MSH6P52701 1360 aa25.75■■□□□ 1.71
IFRD1-201ENST00000005558 TTC21AQ8NDW8 1320 aa25.75■■□□□ 1.71
IFRD1-201ENST00000005558 SCAF1Q9H7N4 1312 aaKnown RBP25.75■■□□□ 1.71
IFRD1-201ENST00000005558 ATF3P18847 181 aa25.74■■□□□ 1.71
IFRD1-201ENST00000005558 USP54Q70EL1 1684 aa25.74■■□□□ 1.71
IFRD1-201ENST00000005558 KIF1AQ12756 1690 aa25.74■■□□□ 1.71
IFRD1-201ENST00000005558 COL3A1P02461 1466 aaPredicted RBP25.73■■□□□ 1.71
IFRD1-201ENST00000005558 USP31Q70CQ4 1352 aa25.73■■□□□ 1.71
IFRD1-201ENST00000005558 TRPM3Q9HCF6 1732 aaPredicted RBP25.73■■□□□ 1.71
IFRD1-201ENST00000005558 CADPS2Q86UW7 1296 aa25.73■■□□□ 1.71
IFRD1-201ENST00000005558 FOXO3O43524 673 aa25.7■■□□□ 1.71
IFRD1-201ENST00000005558 POLKQ9UBT6 870 aa25.7■■□□□ 1.71
IFRD1-201ENST00000005558 AATKQ6ZMQ8 1374 aa25.7■■□□□ 1.7
IFRD1-201ENST00000005558 COG3Q96JB2 828 aa25.7■■□□□ 1.7
IFRD1-201ENST00000005558 ADAMTS8Q9UP79 889 aa25.7■■□□□ 1.7
IFRD1-201ENST00000005558 PNPLA6Q8IY17 1366 aa25.69■■□□□ 1.7
IFRD1-201ENST00000005558 SMG6Q86US8 1419 aaKnown RBP25.69■■□□□ 1.7
IFRD1-201ENST00000005558 HNRNPUQ00839 825 aaKnown RBP eCLIP25.67■■□□□ 1.7
IFRD1-201ENST00000005558 INSRP06213 1382 aa25.67■■□□□ 1.7
IFRD1-201ENST00000005558 BLMP54132 1417 aaPredicted RBP25.67■■□□□ 1.7
IFRD1-201ENST00000005558 XPCQ01831 940 aaPredicted RBP25.65■■□□□ 1.7
IFRD1-201ENST00000005558 PSME1Q06323 249 aa25.65■■□□□ 1.7
IFRD1-201ENST00000005558 DDX17Q92841 729 aaKnown RBP25.65■■□□□ 1.7
IFRD1-201ENST00000005558 EMILIN1Q9Y6C2 1016 aa25.65■■□□□ 1.7
IFRD1-201ENST00000005558 PEAK1Q9H792 1746 aa25.64■■□□□ 1.69
IFRD1-201ENST00000005558 ALS2Q96Q42 1657 aa25.62■■□□□ 1.69
IFRD1-201ENST00000005558 RRS1Q15050 365 aaKnown RBP25.62■■□□□ 1.69
IFRD1-201ENST00000005558 BRINP3Q76B58 766 aa25.62■■□□□ 1.69
IFRD1-201ENST00000005558 NUTM2GQ5VZR2 741 aa25.61■■□□□ 1.69
IFRD1-201ENST00000005558 KRT28Q7Z3Y7 464 aa25.61■■□□□ 1.69
IFRD1-201ENST00000005558 SLAIN2Q9P270 581 aa25.61■■□□□ 1.69
IFRD1-201ENST00000005558 PXDNQ92626 1479 aa25.61■■□□□ 1.69
IFRD1-201ENST00000005558 SENP3-EIF4A1A0A087X0R7 540 aa25.6■■□□□ 1.69
IFRD1-201ENST00000005558 ABTB2Q8N961 1025 aa25.6■■□□□ 1.69
IFRD1-201ENST00000005558 PAK3O75914 559 aaPredicted RBP25.6■■□□□ 1.69
IFRD1-201ENST00000005558 NLRP6P59044 892 aa25.6■■□□□ 1.69
IFRD1-201ENST00000005558 CDK12Q9NYV4 1490 aaPredicted RBP25.59■■□□□ 1.69
IFRD1-201ENST00000005558 CENPBP07199 599 aaPredicted RBP25.57■■□□□ 1.68
IFRD1-201ENST00000005558 WDR43Q15061 677 aaKnown RBP eCLIP25.56■■□□□ 1.68
IFRD1-201ENST00000005558 CFAP53Q96M91 514 aa25.56■■□□□ 1.68
IFRD1-201ENST00000005558 NFAT5O94916 1531 aa25.55■■□□□ 1.68
IFRD1-201ENST00000005558 ZBED9Q6R2W3 1325 aa25.55■■□□□ 1.68
IFRD1-201ENST00000005558 MAP3K19Q56UN5 1328 aa25.53■■□□□ 1.68
IFRD1-201ENST00000005558 SLIT3O75094 1523 aa25.53■■□□□ 1.68
IFRD1-201ENST00000005558 SBNO1A3KN83 1393 aa25.52■■□□□ 1.68
IFRD1-201ENST00000005558 PPM1GO15355 546 aaPredicted RBP25.52■■□□□ 1.68
IFRD1-201ENST00000005558 NPHP3Q7Z494 1330 aa25.52■■□□□ 1.68
IFRD1-201ENST00000005558 SOX12O15370 315 aa25.51■■□□□ 1.67
IFRD1-201ENST00000005558 IL13P35225 146 aa25.51■■□□□ 1.67
IFRD1-201ENST00000005558 MED1Q15648 1581 aaPredicted RBP25.51■■□□□ 1.67
IFRD1-201ENST00000005558 USP19O94966 1318 aa25.51■■□□□ 1.67
IFRD1-201ENST00000005558 NHSL1Q5SYE7 1610 aa25.51■■□□□ 1.67
IFRD1-201ENST00000005558 DIAPH1O60610 1272 aaKnown RBP25.5■■□□□ 1.67
IFRD1-201ENST00000005558 CCDC146Q8IYE0 955 aa25.5■■□□□ 1.67
IFRD1-201ENST00000005558 CRYBG1Q9Y4K1 1723 aa25.49■■□□□ 1.67
IFRD1-201ENST00000005558 LTN1O94822 1766 aa25.49■■□□□ 1.67
IFRD1-201ENST00000005558 SOS2Q07890 1332 aaPredicted RBP25.49■■□□□ 1.67
IFRD1-201ENST00000005558 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
IFRD1-201ENST00000005558 HSP90AB2PQ58FF8 381 aa25.47■■□□□ 1.67
IFRD1-201ENST00000005558 SPATA31A3Q5VYP0 1347 aa25.47■■□□□ 1.67
IFRD1-201ENST00000005558 TNS3Q68CZ2 1445 aa25.46■■□□□ 1.67
IFRD1-201ENST00000005558 RGPD1P0DJD0 1748 aa25.46■■□□□ 1.67
IFRD1-201ENST00000005558 PHRF1Q9P1Y6 1649 aaKnown RBP25.45■■□□□ 1.66
IFRD1-201ENST00000005558 U2AF1L5P0DN76 240 aaPredicted RBP25.44■■□□□ 1.66
IFRD1-201ENST00000005558 U2AF1Q01081 240 aaKnown RBP eCLIP25.44■■□□□ 1.66
IFRD1-201ENST00000005558 PLEKHF1Q96S99 279 aa25.44■■□□□ 1.66
IFRD1-201ENST00000005558 IQSEC2Q5JU85 1478 aa25.44■■□□□ 1.66
IFRD1-201ENST00000005558 EIF4A2Q14240 407 aaKnown RBP25.44■■□□□ 1.66
IFRD1-201ENST00000005558 ROBO1Q9Y6N7 1651 aa25.43■■□□□ 1.66
IFRD1-201ENST00000005558 GCP02774 474 aa25.42■■□□□ 1.66
IFRD1-201ENST00000005558 FLT4P35916 1363 aa25.42■■□□□ 1.66
IFRD1-201ENST00000005558 APAF1O14727 1248 aa25.42■■□□□ 1.66
IFRD1-201ENST00000005558 U2SURPO15042 1029 aaKnown RBP25.42■■□□□ 1.66
IFRD1-201ENST00000005558 LMOD2Q6P5Q4 547 aa25.41■■□□□ 1.66
IFRD1-201ENST00000005558 NUDCQ9Y266 331 aa25.41■■□□□ 1.66
IFRD1-201ENST00000005558 SALL2Q9Y467 1007 aaPredicted RBP25.41■■□□□ 1.66
IFRD1-201ENST00000005558 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
IFRD1-201ENST00000005558 HOXC9P31274 260 aa25.4■■□□□ 1.66
IFRD1-201ENST00000005558 ZNF521Q96K83 1311 aa25.4■■□□□ 1.66
IFRD1-201ENST00000005558 RUNDC1Q96C34 613 aa25.4■■□□□ 1.66
IFRD1-201ENST00000005558 ARHGEF25Q86VW2 580 aa25.39■■□□□ 1.65
IFRD1-201ENST00000005558 KCNH5Q8NCM2 988 aa25.39■■□□□ 1.65
IFRD1-201ENST00000005558 RSPH6AQ9H0K4 717 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms