RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Ube2q2Q8K2Z8 378 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Fam114a1Q9D281 569 aa11.49□□□□□ -0.57
Usp28-203ENSMUST00000213874 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Q3TQI7 289 aaKnown RBP11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Kiaa0753Q6A000 959 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Hmox1P14901 289 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Bach1P97302 739 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Plekhm2Q80TQ5 1018 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Brpf1B2RRD7 1212 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Casq1O09165 405 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 MsnP26041 577 aaKnown RBP11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 FanclQ9CR14 375 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Zbtb22Q9Z0G7 638 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Usp19Q3UJD6 1360 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 Kiaa1107Q80TK0 1369 aa11.48□□□□□ -0.57
Usp28-203ENSMUST00000213874 CrebrfQ8CDG5 640 aaKnown RBP11.47□□□□□ -0.57
Usp28-203ENSMUST00000213874 Ttc21bQ0HA38 1315 aa11.47□□□□□ -0.57
Usp28-203ENSMUST00000213874 Syce3B5KM66 88 aa11.47□□□□□ -0.57
Usp28-203ENSMUST00000213874 Slc4a10Q5DTL9 1118 aa11.47□□□□□ -0.57
Usp28-203ENSMUST00000213874 Setd1bQ8CFT2 1985 aa11.47□□□□□ -0.57
Usp28-203ENSMUST00000213874 Txndc2Q6P902 515 aa11.47□□□□□ -0.57
Usp28-203ENSMUST00000213874 CenpjQ569L8 1344 aa11.47□□□□□ -0.57
Usp28-203ENSMUST00000213874 Shroom2A2ALU4 1481 aa11.46□□□□□ -0.57
Usp28-203ENSMUST00000213874 Eif4g2Q62448 906 aaKnown RBP11.46□□□□□ -0.57
Usp28-203ENSMUST00000213874 Q8BT18 775 aa11.46□□□□□ -0.57
Usp28-203ENSMUST00000213874 Asxl2Q8BZ32 1370 aa11.46□□□□□ -0.57
Usp28-203ENSMUST00000213874 F2rP30558 430 aa11.46□□□□□ -0.57
Usp28-203ENSMUST00000213874 Tbc1d32Q3URV1 1296 aa11.46□□□□□ -0.57
Usp28-203ENSMUST00000213874 Snap23O09044 210 aa11.46□□□□□ -0.58
Usp28-203ENSMUST00000213874 CastP51125 788 aa11.46□□□□□ -0.58
Usp28-203ENSMUST00000213874 Rasa1E9PYG6 1038 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Gadd45bP22339 160 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Cdk19Q8BWD8 501 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Bloc1s4Q8VED2 215 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Cdc37l1Q9CZP7 335 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Swt1Q9DBQ9 907 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 CarsQ9ER72 831 aaKnown RBP11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Atl3Q91YH5 541 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Gdpd2Q9ESM6 539 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Casc1Q6TDU8 730 aa11.45□□□□□ -0.58
Usp28-203ENSMUST00000213874 Cavin4A2AMM0 362 aa11.44□□□□□ -0.58
Usp28-203ENSMUST00000213874 Rapgef6Q5NCJ1 1609 aa11.44□□□□□ -0.58
Usp28-203ENSMUST00000213874 Pank2Q3U4S0 443 aa11.44□□□□□ -0.58
Usp28-203ENSMUST00000213874 Serpina10Q8R121 448 aa11.44□□□□□ -0.58
Usp28-203ENSMUST00000213874 Becn1O88597 448 aa11.44□□□□□ -0.58
Usp28-203ENSMUST00000213874 Map3k13Q1HKZ5 959 aa11.43□□□□□ -0.58
Usp28-203ENSMUST00000213874 Jarid2Q62315 1234 aa11.43□□□□□ -0.58
Usp28-203ENSMUST00000213874 Bcar3Q9QZK2 820 aa11.43□□□□□ -0.58
Usp28-203ENSMUST00000213874 Cul7Q8VE73 1689 aa11.43□□□□□ -0.58
Usp28-203ENSMUST00000213874 Kcnj4P52189 445 aa11.43□□□□□ -0.58
Usp28-203ENSMUST00000213874 Zbtb45Q52KG4 520 aa11.43□□□□□ -0.58
Usp28-203ENSMUST00000213874 Naa30Q8CES0 364 aa11.43□□□□□ -0.58
Usp28-203ENSMUST00000213874 Cabp4Q8VHC5 271 aa11.42□□□□□ -0.58
Usp28-203ENSMUST00000213874 Mapkbp1Q6NS57 1503 aa11.42□□□□□ -0.58
Usp28-203ENSMUST00000213874 Gsto1O09131 240 aa11.42□□□□□ -0.58
Usp28-203ENSMUST00000213874 Gtpbp6Q3U6U5 514 aa11.42□□□□□ -0.58
Usp28-203ENSMUST00000213874 EappQ5BU09 281 aa11.42□□□□□ -0.58
Usp28-203ENSMUST00000213874 Psme1P97371 249 aa11.42□□□□□ -0.58
Usp28-203ENSMUST00000213874 Mical1Q8VDP3 1048 aa11.42□□□□□ -0.58
Usp28-203ENSMUST00000213874 Brd2Q7JJ13 798 aaKnown RBP11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Frmd3Q8BHD4 595 aa11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Arhgef12Q8R4H2 1543 aaKnown RBP11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Tarbp1E9Q368 1579 aa11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Usp48Q3V0C5 1052 aa11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Jakmip1Q8BVL9 626 aa11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Mknk2Q8CDB0 459 aa11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Rtf1A2AQ19 715 aaKnown RBP11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Prune1Q8BIW1 454 aa11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Ccdc94Q9D6J3 314 aa11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Cpsf1Q9EPU4 1441 aaKnown RBP11.41□□□□□ -0.58
Usp28-203ENSMUST00000213874 Nsd2Q8BVE8 1365 aa11.4□□□□□ -0.58
Usp28-203ENSMUST00000213874 Ppp1r18Q8BQ30 594 aa11.4□□□□□ -0.58
Usp28-203ENSMUST00000213874 Utp3Q9JI13 469 aaKnown RBP11.4□□□□□ -0.58
Usp28-203ENSMUST00000213874 Wdr63B2RY71 923 aa11.4□□□□□ -0.59
Usp28-203ENSMUST00000213874 Ppip5k2Q6ZQB6 1129 aa11.4□□□□□ -0.59
Usp28-203ENSMUST00000213874 Bag4Q8CI61 457 aa11.4□□□□□ -0.59
Usp28-203ENSMUST00000213874 Stk31Q99MW1 1018 aa11.4□□□□□ -0.59
Usp28-203ENSMUST00000213874 Mad1l1Q9WTX8 717 aaKnown RBP11.4□□□□□ -0.59
Usp28-203ENSMUST00000213874 TnikP83510 1323 aa11.39□□□□□ -0.59
Usp28-203ENSMUST00000213874 Phlpp2Q8BXA7 1320 aa11.39□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gm16486A0A1D5RMD1 1434 aa11.39□□□□□ -0.59
Usp28-203ENSMUST00000213874 Afap1Q80YS6 731 aa11.39□□□□□ -0.59
Usp28-203ENSMUST00000213874 Prdm16A2A935 1275 aa11.39□□□□□ -0.59
Usp28-203ENSMUST00000213874 Prim1P20664 417 aa11.39□□□□□ -0.59
Usp28-203ENSMUST00000213874 Map3k4O08648 1597 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Map4k4P97820 1233 aaKnown RBP11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Tomm22Q9CPQ3 142 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Tceanc2Q8R2M0 207 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Mcm3P25206 812 aaKnown RBP11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gzf1Q4VBD9 706 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Clstn1Q9EPL2 979 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gm14025A2AP89 1413 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Mbd5B1AYB6 1498 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Tex14Q7M6U3 1450 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 KdrP35918 1367 aa11.38□□□□□ -0.59
Usp28-203ENSMUST00000213874 Kif2cQ922S8 721 aa11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 Antxr1Q9CZ52 562 aa11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 Brd1E9PZ26 1189 aaKnown RBP11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 Prkar2bP31324 416 aa11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 Cwc27Q3TKY6 469 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms