RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 U2af1Q9D883 239 aaKnown RBP9.91□□□□□ -0.82
Usp40-204ENSMUST00000187758 N4bp2F8VQG7 1678 aaKnown RBP9.91□□□□□ -0.82
Usp40-204ENSMUST00000187758 C3P01027 1663 aa9.91□□□□□ -0.82
Usp40-204ENSMUST00000187758 Astn2Q80Z10 1352 aa9.91□□□□□ -0.82
Usp40-204ENSMUST00000187758 Als2Q920R0 1651 aa9.91□□□□□ -0.82
Usp40-204ENSMUST00000187758 Atf3Q60765 181 aa9.9□□□□□ -0.82
Usp40-204ENSMUST00000187758 Amer1Q7TS75 1132 aa9.9□□□□□ -0.82
Usp40-204ENSMUST00000187758 Unc13bQ9Z1N9 1602 aa9.9□□□□□ -0.82
Usp40-204ENSMUST00000187758 Hoxb7P09024 217 aa9.9□□□□□ -0.83
Usp40-204ENSMUST00000187758 NalcnQ8BXR5 1738 aa9.89□□□□□ -0.83
Usp40-204ENSMUST00000187758 Frmpd2A0A140LI67 1392 aa9.89□□□□□ -0.83
Usp40-204ENSMUST00000187758 CrbnQ8C7D2 445 aa9.89□□□□□ -0.83
Usp40-204ENSMUST00000187758 P2rx7Q9Z1M0 595 aa9.89□□□□□ -0.83
Usp40-204ENSMUST00000187758 Kif1aP33173 1695 aa9.88□□□□□ -0.83
Usp40-204ENSMUST00000187758 Gm21190A0A0G2JGJ6 266 aa9.88□□□□□ -0.83
Usp40-204ENSMUST00000187758 Dennd6aQ8BH65 605 aa9.88□□□□□ -0.83
Usp40-204ENSMUST00000187758 Kiaa1107Q80TK0 1369 aa9.88□□□□□ -0.83
Usp40-204ENSMUST00000187758 Fyb1O35601 819 aa9.88□□□□□ -0.83
Usp40-204ENSMUST00000187758 Mon2Q80TL7 1715 aa9.88□□□□□ -0.83
Usp40-204ENSMUST00000187758 Tmem2Q5FWI3 1383 aa9.87□□□□□ -0.83
Usp40-204ENSMUST00000187758 Zfp444Q3TDV8 331 aaKnown RBP9.87□□□□□ -0.83
Usp40-204ENSMUST00000187758 Cabp4Q8VHC5 271 aa9.87□□□□□ -0.83
Usp40-204ENSMUST00000187758 Mapk8ip3Q9ESN9 1337 aa9.86□□□□□ -0.83
Usp40-204ENSMUST00000187758 Ppp1r15aP17564 657 aa9.86□□□□□ -0.83
Usp40-204ENSMUST00000187758 Speer4f1Q9D5Q6 258 aa9.86□□□□□ -0.83
Usp40-204ENSMUST00000187758 Map4k4P97820 1233 aaKnown RBP9.86□□□□□ -0.83
Usp40-204ENSMUST00000187758 Ltbp4Q8K4G1 1666 aa9.85□□□□□ -0.83
Usp40-204ENSMUST00000187758 Trim28Q62318 834 aa9.85□□□□□ -0.83
Usp40-204ENSMUST00000187758 Tcerg1Q8CGF7 1100 aaKnown RBP9.85□□□□□ -0.83
Usp40-204ENSMUST00000187758 Farp2Q91VS8 1065 aa9.85□□□□□ -0.83
Usp40-204ENSMUST00000187758 Gm38655A0A286YDK6 273 aa9.85□□□□□ -0.83
Usp40-204ENSMUST00000187758 Neurod2Q62414 383 aa9.85□□□□□ -0.83
Usp40-204ENSMUST00000187758 Slc12a5Q91V14 1138 aa9.85□□□□□ -0.83
Usp40-204ENSMUST00000187758 Kcna6Q61923 529 aa9.84□□□□□ -0.83
Usp40-204ENSMUST00000187758 Cdk12Q14AX6 1484 aaKnown RBP9.84□□□□□ -0.83
Usp40-204ENSMUST00000187758 Wdr17E9Q271 1322 aa9.84□□□□□ -0.83
Usp40-204ENSMUST00000187758 CemipQ8BI06 1361 aa9.84□□□□□ -0.83
Usp40-204ENSMUST00000187758 Sipa1l2Q80TE4 1722 aa9.84□□□□□ -0.83
Usp40-204ENSMUST00000187758 Gimap6Q8K349 305 aa9.84□□□□□ -0.83
Usp40-204ENSMUST00000187758 GnpatP98192 678 aa9.83□□□□□ -0.84
Usp40-204ENSMUST00000187758 Slc35g1Q8BY79 368 aa9.83□□□□□ -0.84
Usp40-204ENSMUST00000187758 Chd4Q6PDQ2 1915 aaKnown RBP9.83□□□□□ -0.84
Usp40-204ENSMUST00000187758 Nlgn1Q99K10 843 aa9.83□□□□□ -0.84
Usp40-204ENSMUST00000187758 TimelessQ9R1X4 1197 aa9.83□□□□□ -0.84
Usp40-204ENSMUST00000187758 Usp19Q3UJD6 1360 aa9.83□□□□□ -0.84
Usp40-204ENSMUST00000187758 PalmQ9Z0P4 383 aa9.83□□□□□ -0.84
Usp40-204ENSMUST00000187758 Upf2A2AT37 1269 aaKnown RBP9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Zfp777B9EKF4 885 aa9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Uspl1Q3ULM6 1089 aa9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Ralbp1Q62172 648 aa9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Col18a1P39061 1774 aa9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Apaf1O88879 1249 aa9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Col16a1Q8BLX7 1580 aa9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Fchsd2Q3USJ8 740 aa9.82□□□□□ -0.84
Usp40-204ENSMUST00000187758 Pik3c2aQ61194 1686 aa9.81□□□□□ -0.84
Usp40-204ENSMUST00000187758 Uhrf1bp1lA2RSJ4 1457 aa9.81□□□□□ -0.84
Usp40-204ENSMUST00000187758 Rsph6aQ8CDR2 708 aa9.81□□□□□ -0.84
Usp40-204ENSMUST00000187758 Rtl5Q5DTT4 599 aa9.81□□□□□ -0.84
Usp40-204ENSMUST00000187758 Scaf1Q5U4C3 1256 aaKnown RBP9.8□□□□□ -0.84
Usp40-204ENSMUST00000187758 FancaQ9JL70 1439 aa9.8□□□□□ -0.84
Usp40-204ENSMUST00000187758 Ccdc30Q8BVF4 654 aa9.8□□□□□ -0.84
Usp40-204ENSMUST00000187758 Nckap5lQ6GQX2 1323 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 TatQ8QZR1 454 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Ciz1Q8VEH2 845 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Eif4a2P10630 407 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Iqcf3Q9D498 203 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Cavin4A2AMM0 362 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Ecm2Q5FW85 670 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Ncoa4Q5U4H9 625 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Kcnh5Q920E3 988 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 Ncapd2Q8K2Z4 1392 aa9.79□□□□□ -0.84
Usp40-204ENSMUST00000187758 MpripP97434 1024 aa9.78□□□□□ -0.84
Usp40-204ENSMUST00000187758 Brinp3Q499E0 766 aa9.78□□□□□ -0.84
Usp40-204ENSMUST00000187758 Plin1Q8CGN5 517 aa9.78□□□□□ -0.84
Usp40-204ENSMUST00000187758 Amigo3Q8C2S7 508 aa9.78□□□□□ -0.84
Usp40-204ENSMUST00000187758 Calr4Q3TQS0 420 aa9.77□□□□□ -0.84
Usp40-204ENSMUST00000187758 Rad17Q6NXW6 688 aa9.77□□□□□ -0.84
Usp40-204ENSMUST00000187758 Stk31Q99MW1 1018 aa9.77□□□□□ -0.84
Usp40-204ENSMUST00000187758 Fmnl2A2APV2 1086 aa9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 Dusp27Q148W8 1138 aa9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 Camta1A2A891 1682 aa9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 L3mbtl2P59178 703 aa9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 Ddx17Q501J6 650 aaKnown RBP9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 Ano8Q6PB70 1060 aa9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 Dixdc1Q80Y83 711 aa9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 Dzip1Q8BMD2 852 aa9.77□□□□□ -0.85
Usp40-204ENSMUST00000187758 Ubr1O70481 1757 aa9.76□□□□□ -0.85
Usp40-204ENSMUST00000187758 Wnk3Q80XP9 1757 aa9.76□□□□□ -0.85
Usp40-204ENSMUST00000187758 Gli3Q61602 1583 aa9.76□□□□□ -0.85
Usp40-204ENSMUST00000187758 Fam135bQ9DAI6 1403 aa9.76□□□□□ -0.85
Usp40-204ENSMUST00000187758 Kank1E9Q238 1360 aa9.76□□□□□ -0.85
Usp40-204ENSMUST00000187758 Hoxc9P09633 260 aa9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Swt1Q9DBQ9 907 aa9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Mdc1Q5PSV9 1707 aa9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Ccne1Q61457 408 aa9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Ncbp3Q8BZR9 615 aaKnown RBP9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Map2P20357 1828 aa9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Tmem132eQ6IEE6 982 aa9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Scn7aB1AYL1 1681 aa9.75□□□□□ -0.85
Usp40-204ENSMUST00000187758 Plekhh1Q80TI1 1356 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms