RNA–Protein interactions for RNA: ENSMUST00000160422.7

Cpsf4-202, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Cpsf4, Length 1,756 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-202ENSMUST00000160422 Camta1A2A891 1682 aa26.45■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 Trim28Q62318 834 aa26.44■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 Amigo3Q8C2S7 508 aa26.44■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 NgefQ8CHT1 710 aa26.44■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 GsdmaQ9EST1 446 aa26.43■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 Pik3c2aQ61194 1686 aa26.43■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 Col16a1Q8BLX7 1580 aa26.42■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 Cdk12Q14AX6 1484 aaKnown RBP26.4■■□□□ 1.82
Cpsf4-202ENSMUST00000160422 Ofd1Q80Z25 1017 aa26.38■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Usp19Q3UJD6 1360 aa26.38■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Chd4Q6PDQ2 1915 aaKnown RBP26.38■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Mdc1Q5PSV9 1707 aa26.37■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Evi5lH3BKQ3 813 aa26.37■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Tnnt3Q9QZ47 272 aa26.37■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Map4k4P97820 1233 aaKnown RBP26.36■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Wnk3Q80XP9 1757 aa26.36■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Frmpd2A0A140LI67 1392 aa26.35■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Hspa1lP16627 641 aa26.34■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Scaf1Q5U4C3 1256 aaKnown RBP26.34■■□□□ 1.81
Cpsf4-202ENSMUST00000160422 Birc3O08863 600 aa26.33■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Ppp1r15aP17564 657 aa26.33■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Kcna6Q61923 529 aa26.33■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Fam135bQ9DAI6 1403 aa26.32■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Zfp444Q3TDV8 331 aaKnown RBP26.32■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Tsen2Q6P7W5 460 aa26.32■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Slc35g1Q8BY79 368 aa26.32■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Golga2Q921M4 999 aa26.32■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Ubr1O70481 1757 aa26.31■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Wdr17E9Q271 1322 aa26.3■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Uspl1Q3ULM6 1089 aa26.3■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Nlgn1Q99K10 843 aa26.29■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Bcl11bQ99PV8 884 aa26.29■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Brinp3Q499E0 766 aa26.28■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Slc12a5Q91V14 1138 aa26.28■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Scn7aB1AYL1 1681 aa26.28■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Dennd6aQ8BH65 605 aa26.28■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Atf3Q60765 181 aa26.27■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 U2af1Q9D883 239 aaKnown RBP26.27■■□□□ 1.8
Cpsf4-202ENSMUST00000160422 Znf541Q0GGX2 1363 aa26.26■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Csrnp3P59055 597 aa26.25■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Farp2Q91VS8 1065 aa26.25■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Uhrf1bp1lA2RSJ4 1457 aa26.23■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Ncoa4Q5U4H9 625 aa26.23■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Ano8Q6PB70 1060 aa26.23■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Ncbp3Q8BZR9 615 aaKnown RBP26.23■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 CrbnQ8C7D2 445 aa26.23■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Fbxo41Q6NS60 873 aa26.22■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Ncapd2Q8K2Z4 1392 aa26.22■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Rsph6aQ8CDR2 708 aa26.21■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 TimelessQ9R1X4 1197 aa26.21■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Fyb1O35601 819 aa26.2■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Rad17Q6NXW6 688 aa26.2■■□□□ 1.79
Cpsf4-202ENSMUST00000160422 Gm21190A0A0G2JGJ6 266 aa26.2■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Map2P20357 1828 aa26.19■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 DccP70211 1447 aa26.19■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Fchsd2Q3USJ8 740 aa26.19■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Gimap6Q8K349 305 aa26.19■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 FancaQ9JL70 1439 aa26.18■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Aplp2Q06335 707 aa26.18■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Rad21Q61550 635 aaKnown RBP26.18■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 PalmQ9Z0P4 383 aa26.17■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Nckap5lQ6GQX2 1323 aa26.16■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Ecm2Q5FW85 670 aa26.15■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Ralbp1Q62172 648 aa26.15■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Cabp4Q8VHC5 271 aa26.15■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 GnpatP98192 678 aa26.14■■□□□ 1.78
Cpsf4-202ENSMUST00000160422 Apaf1O88879 1249 aa26.13■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Eif4a2P10630 407 aa26.13■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Speer4f1Q9D5Q6 258 aa26.13■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Nfat5Q9WV30 1534 aa26.13■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Tcerg1Q8CGF7 1100 aaKnown RBP26.12■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Kank1E9Q238 1360 aa26.12■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 PtprvP70289 1705 aa26.12■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Robo1O89026 1612 aa26.11■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Spef2Q8C9J3 1734 aa26.11■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 L3mbtl2P59178 703 aa26.1■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Q4VA45 678 aa26.1■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Ttc41Q692V3 1318 aa26.1■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Ciz1Q8VEH2 845 aa26.1■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Uhrf1bp1B2KF50 1429 aa26.09■■□□□ 1.77
Cpsf4-202ENSMUST00000160422 Eif5bQ05D44 1216 aaKnown RBP26.07■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Ccdc30Q8BVF4 654 aa26.07■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Kcnh5Q920E3 988 aa26.06■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Mapk8ip3Q9ESN9 1337 aa26.06■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Hoxc9P09633 260 aa26.05■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Gimap5Q8BWF2 308 aa26.05■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Cavin4A2AMM0 362 aa26.05■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Erbb3Q61526 1339 aa26.04■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Siglec1Q62230 1695 aa26.04■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Zfp777B9EKF4 885 aa26.04■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Ddx17Q501J6 650 aaKnown RBP26.04■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 PaskQ8CEE6 1383 aa26.02■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Zmym3Q9JLM4 1370 aa26.02■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Tet3Q8BG87 1668 aa26.02■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Dusp27Q148W8 1138 aa26.02■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 1700123L14RikQ3V2K7 440 aa26.02■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Ptpn23Q6PB44 1692 aa26.02■■□□□ 1.76
Cpsf4-202ENSMUST00000160422 Dixdc1Q80Y83 711 aa26.01■■□□□ 1.75
Cpsf4-202ENSMUST00000160422 Ttll13A4Q9F6 804 aa26■■□□□ 1.75
Cpsf4-202ENSMUST00000160422 Neurod2Q62414 383 aa26■■□□□ 1.75
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms