RNA–Protein interactions for RNA: ENSMUST00000120987.1

Trappc11-202, Transcript of Trafficking protein particle complex subunit 11, mousemouse

TSL 1 (best) BASIC

Gene Trappc11, Length 2,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc11-202ENSMUST00000120987 Wnk3Q80XP9 1757 aa21.31■■□□□ 1
Trappc11-202ENSMUST00000120987 Camta1A2A891 1682 aa21.3■■□□□ 1
Trappc11-202ENSMUST00000120987 Col16a1Q8BLX7 1580 aa21.3■■□□□ 1
Trappc11-202ENSMUST00000120987 Ubr1O70481 1757 aa21.29■■□□□ 1
Trappc11-202ENSMUST00000120987 Astn2Q80Z10 1352 aa21.29■■□□□ 1
Trappc11-202ENSMUST00000120987 Mdc1Q5PSV9 1707 aa21.28■■□□□ 1
Trappc11-202ENSMUST00000120987 Esx1O88933 382 aa21.28■■□□□ 1
Trappc11-202ENSMUST00000120987 Slc35g1Q8BY79 368 aa21.25■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Map2P20357 1828 aa21.25■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Scn7aB1AYL1 1681 aa21.24■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Mak16Q8BGS0 296 aaKnown RBP21.24■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Birc3O08863 600 aa21.24■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Cdk12Q14AX6 1484 aaKnown RBP21.24■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Frmpd2A0A140LI67 1392 aa21.23■□□□□ 0.99
Trappc11-202ENSMUST00000120987 CemipQ8BI06 1361 aa21.23■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Trim28Q62318 834 aa21.23■□□□□ 0.99
Trappc11-202ENSMUST00000120987 GsdmaQ9EST1 446 aa21.22■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Usp19Q3UJD6 1360 aa21.21■□□□□ 0.99
Trappc11-202ENSMUST00000120987 Hoxb7P09024 217 aa21.19■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Wdr17E9Q271 1322 aa21.18■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Ofd1Q80Z25 1017 aa21.17■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Atf3Q60765 181 aa21.17■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Kcna6Q61923 529 aa21.17■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Uhrf1bp1lA2RSJ4 1457 aa21.17■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Nlgn1Q99K10 843 aa21.16■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Tsen2Q6P7W5 460 aa21.16■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Dennd6aQ8BH65 605 aa21.15■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Zfp444Q3TDV8 331 aaKnown RBP21.14■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Slc12a5Q91V14 1138 aa21.14■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Farp2Q91VS8 1065 aa21.14■□□□□ 0.98
Trappc11-202ENSMUST00000120987 Brinp3Q499E0 766 aa21.14■□□□□ 0.97
Trappc11-202ENSMUST00000120987 FancaQ9JL70 1439 aa21.13■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Nckap5lQ6GQX2 1323 aa21.13■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Golga2Q921M4 999 aa21.13■□□□□ 0.97
Trappc11-202ENSMUST00000120987 PtprvP70289 1705 aa21.13■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Ppp1r15aP17564 657 aa21.13■□□□□ 0.97
Trappc11-202ENSMUST00000120987 GnpatP98192 678 aa21.13■□□□□ 0.97
Trappc11-202ENSMUST00000120987 U2af1Q9D883 239 aaKnown RBP21.13■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Gm21190A0A0G2JGJ6 266 aa21.11■□□□□ 0.97
Trappc11-202ENSMUST00000120987 CrbnQ8C7D2 445 aa21.11■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Fyb1O35601 819 aa21.11■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Map4k4P97820 1233 aaKnown RBP21.11■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Ddx17Q501J6 650 aaKnown RBP21.1■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Uspl1Q3ULM6 1089 aa21.09■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Tcerg1Q8CGF7 1100 aaKnown RBP21.09■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Rad21Q61550 635 aaKnown RBP21.09■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Ncapd2Q8K2Z4 1392 aa21.09■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Robo1O89026 1612 aa21.08■□□□□ 0.97
Trappc11-202ENSMUST00000120987 TimelessQ9R1X4 1197 aa21.08■□□□□ 0.97
Trappc11-202ENSMUST00000120987 Fam135bQ9DAI6 1403 aa21.08■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Rsph6aQ8CDR2 708 aa21.08■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Nfat5Q9WV30 1534 aa21.07■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Siglec1Q62230 1695 aa21.07■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Cabp4Q8VHC5 271 aa21.07■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Spef2Q8C9J3 1734 aa21.07■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Ncoa4Q5U4H9 625 aa21.06■□□□□ 0.96
Trappc11-202ENSMUST00000120987 PalmQ9Z0P4 383 aa21.06■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Parp14Q2EMV9 1817 aa21.05■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Apaf1O88879 1249 aa21.05■□□□□ 0.96
Trappc11-202ENSMUST00000120987 DccP70211 1447 aa21.05■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Tet3Q8BG87 1668 aa21.04■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Eif4a2P10630 407 aa21.03■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Ano8Q6PB70 1060 aa21.03■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Gimap6Q8K349 305 aa21.02■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Znf541Q0GGX2 1363 aa21.02■□□□□ 0.96
Trappc11-202ENSMUST00000120987 Abca15E9PWH4 1668 aa21■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Eif5bQ05D44 1216 aaKnown RBP21■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Speer4f1Q9D5Q6 258 aa21■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Scaf1Q5U4C3 1256 aaKnown RBP20.99■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Q4VA45 678 aa20.98■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Ptpn23Q6PB44 1692 aa20.97■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Dixdc1Q80Y83 711 aa20.97■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Hoxc9P09633 260 aa20.97■□□□□ 0.95
Trappc11-202ENSMUST00000120987 L3mbtl2P59178 703 aa20.97■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Fchsd2Q3USJ8 740 aa20.97■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Dzip1Q8BMD2 852 aa20.97■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Ecm2Q5FW85 670 aa20.96■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Kif24Q6NWW5 1356 aa20.96■□□□□ 0.95
Trappc11-202ENSMUST00000120987 Tmem132eQ6IEE6 982 aa20.95■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Neurod2Q62414 383 aa20.95■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Mcm10Q0VBD2 885 aa20.94■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Rad17Q6NXW6 688 aa20.94■□□□□ 0.94
Trappc11-202ENSMUST00000120987 PaskQ8CEE6 1383 aa20.94■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Erbb3Q61526 1339 aa20.94■□□□□ 0.94
Trappc11-202ENSMUST00000120987 MpripP97434 1024 aa20.93■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Mapk8ip3Q9ESN9 1337 aa20.93■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Ralbp1Q62172 648 aa20.93■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Ccdc30Q8BVF4 654 aa20.93■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Kcnh5Q920E3 988 aa20.93■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Tnnt3Q9QZ47 272 aa20.93■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Uhrf1bp1B2KF50 1429 aa20.92■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Ccne1Q61457 408 aa20.92■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Atxn3Q9CVD2 355 aa20.92■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Dnajc10Q9DC23 793 aa20.92■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Kank1E9Q238 1360 aa20.92■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Bcl9lQ67FY2 1494 aa20.91■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Dusp27Q148W8 1138 aa20.91■□□□□ 0.94
Trappc11-202ENSMUST00000120987 TatQ8QZR1 454 aa20.91■□□□□ 0.94
Trappc11-202ENSMUST00000120987 TnrQ8BYI9 1358 aa20.9■□□□□ 0.94
Trappc11-202ENSMUST00000120987 Ncbp3Q8BZR9 615 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 76 ms