RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Hspa4Q61316 841 aa12.25□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Suds3Q8BR65 328 aa12.24□□□□□ -0.45
Col6a3-201ENSMUST00000056925 SltmQ8CH25 1031 aaKnown RBP12.24□□□□□ -0.45
Col6a3-201ENSMUST00000056925 CenpjQ569L8 1344 aa12.24□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Nek4Q9Z1J2 792 aa12.24□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Q8C5K5 320 aa12.24□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Smc1aQ9CU62 1233 aaKnown RBP12.24□□□□□ -0.45
Col6a3-201ENSMUST00000056925 SkilQ60665 675 aa12.24□□□□□ -0.45
Col6a3-201ENSMUST00000056925 ScaperF8VQ70 1398 aaKnown RBP12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 TxlnaQ6PAM1 554 aaKnown RBP12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 DonsonQ9QXP4 560 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Clul1Q3ZRW6 464 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Ccdc96Q9CR92 584 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Gm45140A0A0N4SUM8 220 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Pip4k2aO70172 405 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Pank1Q8K4K6 548 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Rcan3Q9JKK0 239 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 ZfxP17012 799 aa12.23□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Iqca1Q9CUL5 857 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Serpinb6bO08804 377 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Ccdc73Q8CDM4 1066 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Syap1Q9D5V6 365 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Nbr1P97432 988 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Eif3j1Q3UGC7 261 aaKnown RBP12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Eif3j2Q66JS6 263 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Slc13a4Q8BZ82 625 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Shtn1Q8K2Q9 631 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Smarcc1P97496 1104 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Uri1Q3TLD5 531 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Fnbp4Q6ZQ03 1031 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Plekhd1B2RPU2 505 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Stk31Q99MW1 1018 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Zeb2Q9R0G7 1215 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Ca8P28651 291 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Gtf2f1Q3THK3 508 aaKnown RBP12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Utp14aQ640M1 767 aaKnown RBP12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Calcoco1Q8CGU1 691 aa12.22□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Naa25Q8BWZ3 972 aa12.21□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Tspyl3Q3UYP3 334 aa12.21□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Synpo2Q91YE8 1087 aaKnown RBP12.21□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Nup155Q99P88 1391 aaKnown RBP12.21□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Paxbp1P58501 919 aa12.21□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Commd10Q8JZY2 202 aa12.21□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Rsrc1Q9DBU6 334 aa12.21□□□□□ -0.45
Col6a3-201ENSMUST00000056925 Ercc3P49135 783 aa12.21□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Mcm2P97310 904 aa12.2□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Smc4Q8CG47 1286 aa12.2□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cyp46a1Q9WVK8 500 aa12.2□□□□□ -0.46
Col6a3-201ENSMUST00000056925 4921530L21RikQ9CQ47 274 aa12.2□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ercc6F8VPZ5 1481 aa12.2□□□□□ -0.46
Col6a3-201ENSMUST00000056925 GsdmaQ9EST1 446 aa12.2□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Hmgb1P63158 215 aaKnown RBP12.2□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Me1P06801 572 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Mipol1Q9D9F8 279 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 ImpactO55091 318 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Dync1i1O88485 628 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Stk38Q91VJ4 465 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ppp4r3bQ922R5 820 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cfap53Q9D439 514 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Mctp1E9PV86 951 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Arhgef18Q6P9R4 1021 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ccdc30Q8BVF4 654 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 SrrtQ99MR6 875 aaKnown RBP12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Nup88Q8CEC0 753 aaKnown RBP12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 RalylQ8BTF8 293 aa12.19□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Sept14Q9DA97 430 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Rfc1P35601 1131 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 StambpQ9CQ26 424 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 UacaQ8CGB3 1411 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ankrd36D3Z4K0 1415 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Gbp2Q9Z0E6 589 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Inpp5dQ9ES52 1191 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 NacadQ5SWP3 1504 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Stim1P70302 685 aa12.18□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Samm50Q8BGH2 469 aa12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cep89Q9CZX2 791 aa12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Znf704Q9ERQ3 566 aa12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ktn1Q61595 1327 aaKnown RBP12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Gbp9Q8BTS3 619 aa12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Esx1O88933 382 aa12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cdr1E9Q0B4 517 aa12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 HypkQ9CR41 129 aa12.17□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Akap8Q9DBR0 687 aaKnown RBP12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Dapk1Q80YE7 1442 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Fmn1Q05860 1466 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Pafah1b1P63005 410 aaKnown RBP12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Gbp1Q01514 589 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Gm10471E9Q1C7 252 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ccdc186Q8C9S4 917 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 CrcpO35427 148 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cep135Q6P5D4 1140 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Znf653Q6YND2 615 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Mcm4P49717 862 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cavin1O54724 392 aa12.16□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Vps41Q5KU39 853 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Larp1Q6ZQ58 1072 aaKnown RBP12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ciz1Q8VEH2 845 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cers3Q1A3B0 383 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Krt85Q9Z2T6 507 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Cnnm3Q32NY4 713 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms