RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Rab3gap2Q8BMG7 1366 aa27.7■■■□□ 2.02
Ccdc9-201ENSMUST00000041010 Tspyl2Q7TQI8 677 aa27.68■■■□□ 2.02
Ccdc9-201ENSMUST00000041010 Pcdh10E9PXQ7 1057 aa27.68■■■□□ 2.02
Ccdc9-201ENSMUST00000041010 Atp1b4Q99ME6 356 aa27.67■■■□□ 2.02
Ccdc9-201ENSMUST00000041010 Ccdc30Q8BVF4 654 aa27.67■■■□□ 2.02
Ccdc9-201ENSMUST00000041010 Speer4f1Q9D5Q6 258 aa27.67■■■□□ 2.02
Ccdc9-201ENSMUST00000041010 Spryd3E9Q9B3 442 aa27.65■■■□□ 2.02
Ccdc9-201ENSMUST00000041010 Cep170bQ80U49 1574 aa27.64■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Znf521Q6KAS7 1311 aa27.63■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Paxip1Q6NZQ4 1056 aa27.63■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Plppr3Q7TPB0 716 aa27.63■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 ArxO35085 564 aa27.63■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Q9D9H8 365 aa27.62■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Taok2Q6ZQ29 1240 aa27.62■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Bcl9Q9D219 1425 aa27.61■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Tnpo1Q8BFY9 898 aaKnown RBP27.61■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 NgefQ8CHT1 710 aa27.61■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Usp19Q3UJD6 1360 aa27.61■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Rabep1O35551 862 aa27.6■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Abca14E9Q8F8 1683 aa27.6■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Slit3Q9WVB4 1523 aa27.6■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Mcm4P49717 862 aa27.59■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Gprasp1Q5U4C1 1347 aa27.58■■■□□ 2.01
Ccdc9-201ENSMUST00000041010 Ppp2r3aB2RXC8 1150 aa27.57■■■□□ 2
Ccdc9-201ENSMUST00000041010 Stk26Q99JT2 416 aa27.57■■■□□ 2
Ccdc9-201ENSMUST00000041010 Tbc1d32Q3URV1 1296 aa27.56■■■□□ 2
Ccdc9-201ENSMUST00000041010 Txndc2Q6P902 515 aa27.56■■■□□ 2
Ccdc9-201ENSMUST00000041010 Lmtk3Q5XJV6 1424 aa27.56■■■□□ 2
Ccdc9-201ENSMUST00000041010 Nwd1A6H603 1563 aa27.55■■■□□ 2
Ccdc9-201ENSMUST00000041010 Psme1P97371 249 aa27.55■■■□□ 2
Ccdc9-201ENSMUST00000041010 Zfp777B9EKF4 885 aa27.55■■■□□ 2
Ccdc9-201ENSMUST00000041010 Neurod2Q62414 383 aa27.54■■■□□ 2
Ccdc9-201ENSMUST00000041010 Rrp12Q6P5B0 1295 aaKnown RBP27.54■■■□□ 2
Ccdc9-201ENSMUST00000041010 Rlbp1Q9Z275 317 aa27.54■■■□□ 2
Ccdc9-201ENSMUST00000041010 Utp14aQ640M1 767 aaKnown RBP27.53■■■□□ 2
Ccdc9-201ENSMUST00000041010 Il4rP16382 810 aa27.53■■■□□ 2
Ccdc9-201ENSMUST00000041010 KarsQ99MN1 595 aaKnown RBP27.52■■■□□ 2
Ccdc9-201ENSMUST00000041010 KdrP35918 1367 aa27.52■■■□□ 2
Ccdc9-201ENSMUST00000041010 Pank1Q8K4K6 548 aa27.52■■■□□ 2
Ccdc9-201ENSMUST00000041010 4930407I10RikD3Z5T8 1512 aa27.51■■■□□ 2
Ccdc9-201ENSMUST00000041010 Cps1Q8C196 1500 aa27.51■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Arap3Q8R5G7 1538 aa27.5■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Duxf3A0A0N4SV92 674 aa27.49■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Nrxn1Q9CS84 1514 aa27.49■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 NktrP30415 1453 aa27.49■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Alpk3Q924C5 1678 aa27.48■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Trim58Q5NCC9 485 aa27.48■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 PzpQ61838 1495 aa27.48■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Ssh1Q76I79 1042 aa27.48■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Pik3r4Q8VD65 1358 aa27.47■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Ralbp1Q62172 648 aa27.46■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Kif7B7ZNG0 1348 aa27.46■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 Isy1Q69ZQ2 285 aaKnown RBP27.45■■□□□ 1.99
Ccdc9-201ENSMUST00000041010 PogkQ80TC5 607 aa27.45■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Atp2b2Q9R0K7 1198 aa27.43■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Tex2Q6ZPJ0 1128 aaKnown RBP27.42■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Catsper2A2ARP9 588 aa27.42■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Asxl2Q8BZ32 1370 aa27.41■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Gsto1O09131 240 aa27.41■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Exosc9Q9JHI7 438 aaKnown RBP27.41■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Adgrl1Q80TR1 1466 aa27.41■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Fam135bQ9DAI6 1403 aa27.4■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Cnga1P29974 684 aa27.4■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Golga2Q921M4 999 aa27.4■■□□□ 1.98
Ccdc9-201ENSMUST00000041010 Topaz1E5FYH1 1653 aa27.39■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Nlrp6Q91WS2 869 aa27.38■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Gas2l2Q5SSG4 860 aa27.38■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 FanciQ8K368 1330 aa27.38■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Terf2O35144 541 aa27.37■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Uspl1Q3ULM6 1089 aa27.37■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 IghaA0A0A6YXW6 389 aa27.37■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Clcn1Q64347 994 aa27.36■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Tpm2P58774 284 aa27.36■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 GphnQ8BUV3 769 aaKnown RBP27.36■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Atl3Q91YH5 541 aa27.36■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Armcx1Q9CX83 456 aa27.36■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Usp32F8VPZ3 1604 aa27.35■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Cdk19Q8BWD8 501 aa27.35■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Ddrgk1Q80WW9 315 aa27.34■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Phlpp2Q8BXA7 1320 aa27.34■■□□□ 1.97
Ccdc9-201ENSMUST00000041010 Trim44Q9QXA7 346 aa27.33■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Dusp27Q148W8 1138 aa27.3■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Kif2cQ922S8 721 aa27.3■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Tnrc6bQ8BKI2 1810 aaKnown RBP27.3■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Kiaa1107Q80TK0 1369 aa27.29■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Rreb1Q3UH06 1700 aaKnown RBP27.29■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Plcb2A3KGF7 1181 aa27.28■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Scaf11E9PZM7 1456 aaKnown RBP27.28■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Pik3c2bE9QAN8 1632 aa27.27■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Mfap1aC0HKD8 439 aaKnown RBP27.27■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Mfap1bC0HKD9 439 aaKnown RBP27.27■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Pnmal2G3X9N3 661 aa27.27■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 MyclP10166 368 aa27.27■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Ddit3P35639 168 aa27.27■■□□□ 1.96
Ccdc9-201ENSMUST00000041010 Kif20bQ80WE4 1774 aaKnown RBP27.24■■□□□ 1.95
Ccdc9-201ENSMUST00000041010 D430041D05RikF6ZGR6 1678 aa27.23■■□□□ 1.95
Ccdc9-201ENSMUST00000041010 SlkO54988 1233 aa27.23■■□□□ 1.95
Ccdc9-201ENSMUST00000041010 Map4k4P97820 1233 aaKnown RBP27.22■■□□□ 1.95
Ccdc9-201ENSMUST00000041010 PtpruB1AUH1 1446 aa27.22■■□□□ 1.95
Ccdc9-201ENSMUST00000041010 Rimbp3Q3V0F0 1606 aa27.21■■□□□ 1.95
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms