RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Cald1E9QA15 768 aaKnown RBP9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gimap5Q8BWF2 308 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Flad1Q8R123 492 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Gapvd1Q6PAR5 1458 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Kif16bB1AVY7 1312 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Becn1O88597 448 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 ApobrQ8VBT6 942 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 St18Q80TY4 1045 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Atl3Q91YH5 541 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Trim34aQ99PP6 485 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Rapgef4Q9EQZ6 1011 aa9.09□□□□□ -0.95
Usp40-201ENSMUST00000040783 Plekhh1Q80TI1 1356 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Scaf1Q5U4C3 1256 aaKnown RBP9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Kiaa0754Q69ZZ9 979 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Plcd3Q8K2J0 785 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Cetn4Q8K4K1 168 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Rapgef6Q5NCJ1 1609 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Elp1Q7TT37 1333 aaKnown RBP9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Ccp110Q7TSH4 1004 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Nutm1Q8BHP2 1126 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Farp2Q91VS8 1065 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Mapk8ip1Q9WVI9 707 aa9.08□□□□□ -0.96
Usp40-201ENSMUST00000040783 Prl7d1P04769 244 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Kri1Q8VDQ9 704 aaKnown RBP9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Ush1cQ9ES64 910 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 PalmQ9Z0P4 383 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Asxl1P59598 1514 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Srek1Q8BZX4 494 aaKnown RBP9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Tom1O88746 492 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Dusp27Q148W8 1138 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Pank1Q8K4K6 548 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 Sytl4Q9R0Q1 673 aa9.07□□□□□ -0.96
Usp40-201ENSMUST00000040783 TmpoQ61033 693 aaKnown RBP9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Eif3aP23116 1344 aaKnown RBP9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Btbd11Q6GQW0 1109 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 KinQ8K339 391 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Q9D2X8 372 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Fam50bQ9WTJ8 334 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Ncoa3O09000 1398 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Trim34bJ3QNR8 485 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Krt82Q99M74 516 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Acsbg1Q99PU5 721 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 OptnQ8K3K8 584 aa9.06□□□□□ -0.96
Usp40-201ENSMUST00000040783 Hap1O35668 628 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Slc4a2P13808 1237 aaKnown RBP9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Hmox1P14901 289 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Mcm2P97310 904 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Cyp46a1Q9WVK8 500 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Zmym3Q9JLM4 1370 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Gnai2P08752 355 aaKnown RBP9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Wdhd1P59328 1117 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Arid3aQ62431 601 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Ppp1r15aP17564 657 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Idi2Q8BFZ6 227 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Nol11Q8BJW5 723 aaKnown RBP9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 DroshaQ5HZJ0 1373 aaKnown RBP9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Pde4bB1AWC9 736 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Rsph3aQ3UFY4 516 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Nap1l3Q794H2 544 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Tmem132aQ922P8 1018 aa9.05□□□□□ -0.96
Usp40-201ENSMUST00000040783 Abcc1O35379 1528 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Ankrd26Q811D2 1581 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 PrxO55103 1391 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Wdr7Q920I9 1489 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Zrsr2Q62377 462 aaKnown RBP9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Polr3aB2RXC6 1390 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Klf15Q9EPW2 415 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Cplx1P63040 134 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Ggnbp2Q5SV77 696 aa9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 NgdnQ9DB96 315 aaKnown RBP9.04□□□□□ -0.96
Usp40-201ENSMUST00000040783 Eif4g1Q6NZJ6 1600 aaKnown RBP9.03□□□□□ -0.96
Usp40-201ENSMUST00000040783 Tshz2Q68FE9 1030 aa9.03□□□□□ -0.96
Usp40-201ENSMUST00000040783 Isy1Q69ZQ2 285 aaKnown RBP9.03□□□□□ -0.96
Usp40-201ENSMUST00000040783 Cdc37l1Q9CZP7 335 aa9.03□□□□□ -0.96
Usp40-201ENSMUST00000040783 Shroom2A2ALU4 1481 aa9.02□□□□□ -0.96
Usp40-201ENSMUST00000040783 PxdnQ3UQ28 1475 aa9.02□□□□□ -0.96
Usp40-201ENSMUST00000040783 Pla2r1Q62028 1487 aa9.02□□□□□ -0.96
Usp40-201ENSMUST00000040783 Ttc19Q8CC21 365 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Klc3Q91W40 508 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Zkscan2G3X952 960 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Jmjd4Q8BFT6 427 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Paf1Q8K2T8 535 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Thoc2B1AZI6 1594 aaKnown RBP9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Casq1O09165 405 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Slc5a1Q8C3K6 665 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Nlrp3Q8R4B8 1033 aa9.02□□□□□ -0.97
Usp40-201ENSMUST00000040783 Phactr2B1AVP0 632 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 SkilQ60665 675 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Nphp1Q9QY53 687 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Zfp444Q3TDV8 331 aaKnown RBP9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Agtpbp1Q641K1 1218 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Cchcr1Q8K2I2 770 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Dennd4bQ3U1Y4 1499 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 WizO88286 1684 aaKnown RBP9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Tmem94Q7TSH8 1360 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Me1P06801 572 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Ehmt1Q5DW34 1296 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Fam13bQ8K2H3 851 aa9.01□□□□□ -0.97
Usp40-201ENSMUST00000040783 Bicdl1A0JNT9 577 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms