RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Setbp1Q9Z180 1582 aa13.82□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Atp2b2Q9R0K7 1198 aa13.82□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Disp1Q3TDN0 1521 aa13.82□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Cabp2Q9JLK4 216 aa13.82□□□□□ -0.2
Topbp1-201ENSMUST00000035164 CrebrfQ8CDG5 640 aaKnown RBP13.82□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Hmox1P14901 289 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Slc12a5Q91V14 1138 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 FanclQ9CR14 375 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Magi3Q9EQJ9 1476 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Ccdc171E9Q1U1 1324 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 KdrP35918 1367 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Tmx3Q8BXZ1 456 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Cdc37l1Q9CZP7 335 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Aldh1l1Q8R0Y6 902 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Rcan3Q9JKK0 239 aa13.81□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Brpf1B2RRD7 1212 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gnai1B2RSH2 354 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Q9D9H8 365 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gnai3Q9DC51 354 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Ttc41Q692V3 1318 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Mcm10Q0VBD2 885 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 MvpQ9EQK5 861 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Zfp91Q62511 572 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Serpina10Q8R121 448 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Rapgef6Q5NCJ1 1609 aa13.8□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Sf3a1Q8K4Z5 791 aaKnown RBP13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gdpd2Q9ESM6 539 aa13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Cbx1P83917 185 aaKnown RBP13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Klhdc4Q921I2 584 aa13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Ttc21bQ0HA38 1315 aa13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gcc2Q8CHG3 1679 aa13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Cyp46a1Q9WVK8 500 aa13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gm14025A2AP89 1413 aa13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Rtf1A2AQ19 715 aaKnown RBP13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 PtprgQ05909 1442 aa13.79□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Neo1P97798 1493 aa13.78□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Jakmip1Q8BVL9 626 aa13.78□□□□□ -0.2
Topbp1-201ENSMUST00000035164 P2rx7Q9Z1M0 595 aa13.78□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Stk31Q99MW1 1018 aa13.78□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Clcn1Q64347 994 aa13.78□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Gsto1O09131 240 aa13.77□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Tshz3Q8CGV9 1081 aa13.77□□□□□ -0.2
Topbp1-201ENSMUST00000035164 Usp48Q3V0C5 1052 aa13.77□□□□□ -0.2
Topbp1-201ENSMUST00000035164 NexnQ7TPW1 607 aa13.77□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Mad1l1Q9WTX8 717 aaKnown RBP13.77□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Sbno1Q689Z5 1390 aa13.77□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Shroom2A2ALU4 1481 aa13.77□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Slc4a10Q5DTL9 1118 aa13.77□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Gse1Q3U3C9 1213 aa13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Kif2cQ922S8 721 aa13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Supt6hQ62383 1726 aaKnown RBP13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Atp6v1dP57746 247 aa13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 TimelessQ9R1X4 1197 aa13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Ggnbp2Q5SV77 696 aa13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Tomm22Q9CPQ3 142 aa13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Irf5P56477 497 aa13.76□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Gzf1Q4VBD9 706 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Wwc1Q5SXA9 1104 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Trim27Q62158 513 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Stk3Q9JI10 497 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Hs1bp3Q3TC93 395 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Chd1lQ9CXF7 900 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Lrrc9Q8CDN9 1456 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Tpd52l1O54818 204 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 MpripP97434 1024 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Sox12Q04890 314 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Erc2Q6PH08 957 aa13.75□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Kdm5cP41230 1554 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Mcm3P25206 812 aaKnown RBP13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Tex2Q6ZPJ0 1128 aaKnown RBP13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Ciz1Q8VEH2 845 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Zbtb22Q9Z0G7 638 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Ankrd44B2RXR6 993 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 ImpactO55091 318 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Frmd3Q8BHD4 595 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Bcar3Q9QZK2 820 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Caskin1Q6P9K8 1431 aa13.74□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Znf521Q6KAS7 1311 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Gm973E9Q295 1059 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Cavin1O54724 392 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Glipr1l2Q9CQ35 332 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 NcapgE9PWG6 1004 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Prkar2bP31324 416 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Rab11fip3Q8CHD8 1047 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Fam135bQ9DAI6 1403 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Samm50Q8BGH2 469 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Gcc1Q9D4H2 778 aa13.73□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Fmnl2A2APV2 1086 aa13.72□□□□□ -0.21
Topbp1-201ENSMUST00000035164 IbtkQ6ZPR6 1352 aaKnown RBP13.72□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Abca5Q8K448 1642 aa13.72□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Ppip5k1A2ARP1 1436 aa13.72□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Ripk4Q9ERK0 786 aa13.71□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Pdia3P27773 505 aaKnown RBP13.71□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Dixdc1Q80Y83 711 aa13.71□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Cdk19Q8BWD8 501 aa13.71□□□□□ -0.21
Topbp1-201ENSMUST00000035164 Vamp4O70480 141 aa13.71□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Mrc2Q64449 1479 aa13.71□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Mapkbp1Q6NS57 1503 aa13.71□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Smc3Q9CW03 1217 aaKnown RBP13.7□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Tarbp1E9Q368 1579 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms