RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 Bcl9lQ67FY2 1494 aa27.99■■■□□ 2.07
Ltb-201ENSMUST00000025262 Cep152A2AUM9 1736 aaKnown RBP27.98■■■□□ 2.07
Ltb-201ENSMUST00000025262 Dzip1Q8BMD2 852 aa27.97■■■□□ 2.07
Ltb-201ENSMUST00000025262 Ncapd2Q8K2Z4 1392 aa27.97■■■□□ 2.07
Ltb-201ENSMUST00000025262 Apba2P98084 750 aa27.96■■■□□ 2.07
Ltb-201ENSMUST00000025262 Rgl3Q3UYI5 709 aa27.95■■■□□ 2.06
Ltb-201ENSMUST00000025262 Ppp6r1Q7TSI3 856 aa27.94■■■□□ 2.06
Ltb-201ENSMUST00000025262 IqubQ8CDK3 788 aa27.94■■■□□ 2.06
Ltb-201ENSMUST00000025262 Pard3Q99NH2 1333 aa27.93■■■□□ 2.06
Ltb-201ENSMUST00000025262 Ezh2Q61188 746 aaKnown RBP27.93■■■□□ 2.06
Ltb-201ENSMUST00000025262 Stag3O70576 1240 aa27.92■■■□□ 2.06
Ltb-201ENSMUST00000025262 HdgfP51859 237 aaKnown RBP27.92■■■□□ 2.06
Ltb-201ENSMUST00000025262 TimelessQ9R1X4 1197 aa27.91■■■□□ 2.06
Ltb-201ENSMUST00000025262 Nid2O88322 1403 aa27.91■■■□□ 2.06
Ltb-201ENSMUST00000025262 Kcna3P16390 528 aa27.9■■■□□ 2.06
Ltb-201ENSMUST00000025262 Fer1l6E0CZ42 1862 aa27.89■■■□□ 2.06
Ltb-201ENSMUST00000025262 PsdQ5DTT2 1024 aa27.89■■■□□ 2.06
Ltb-201ENSMUST00000025262 Sbno1Q689Z5 1390 aa27.88■■■□□ 2.05
Ltb-201ENSMUST00000025262 Mon2Q80TL7 1715 aa27.88■■■□□ 2.05
Ltb-201ENSMUST00000025262 RalgapbQ8BQZ4 1484 aa27.86■■■□□ 2.05
Ltb-201ENSMUST00000025262 Tet3Q8BG87 1668 aa27.86■■■□□ 2.05
Ltb-201ENSMUST00000025262 Mug2P28666 1451 aa27.85■■■□□ 2.05
Ltb-201ENSMUST00000025262 Pm20d1Q8C165 503 aa27.85■■■□□ 2.05
Ltb-201ENSMUST00000025262 4930523C07RikE9Q2T4 99 aa27.84■■■□□ 2.05
Ltb-201ENSMUST00000025262 Cdk19Q8BWD8 501 aa27.84■■■□□ 2.05
Ltb-201ENSMUST00000025262 NktrP30415 1453 aa27.83■■■□□ 2.05
Ltb-201ENSMUST00000025262 Mast2Q60592 1734 aa27.82■■■□□ 2.04
Ltb-201ENSMUST00000025262 Usp40Q8BWR4 1235 aa27.82■■■□□ 2.04
Ltb-201ENSMUST00000025262 Card11Q8CIS0 1159 aa27.81■■■□□ 2.04
Ltb-201ENSMUST00000025262 Cpsf1Q9EPU4 1441 aaKnown RBP27.81■■■□□ 2.04
Ltb-201ENSMUST00000025262 Gm21698A0A087WQP8 267 aa27.8■■■□□ 2.04
Ltb-201ENSMUST00000025262 Gm21671G3UY31 267 aa27.8■■■□□ 2.04
Ltb-201ENSMUST00000025262 Sipa1l1Q8C0T5 1782 aa27.79■■■□□ 2.04
Ltb-201ENSMUST00000025262 En2P09066 324 aa27.79■■■□□ 2.04
Ltb-201ENSMUST00000025262 Magea1O89006 320 aa27.76■■■□□ 2.03
Ltb-201ENSMUST00000025262 Magea5O89009 320 aa27.76■■■□□ 2.03
Ltb-201ENSMUST00000025262 Magea2Q9R2A2 320 aa27.76■■■□□ 2.03
Ltb-201ENSMUST00000025262 Usp47Q8BY87 1376 aa27.74■■■□□ 2.03
Ltb-201ENSMUST00000025262 Slx1bQ8BX32 270 aa27.74■■■□□ 2.03
Ltb-201ENSMUST00000025262 Astn2Q80Z10 1352 aa27.73■■■□□ 2.03
Ltb-201ENSMUST00000025262 Rab3gap2Q8BMG7 1366 aa27.73■■■□□ 2.03
Ltb-201ENSMUST00000025262 GakQ99KY4 1305 aa27.73■■■□□ 2.03
Ltb-201ENSMUST00000025262 Tnrc6bQ8BKI2 1810 aaKnown RBP27.73■■■□□ 2.03
Ltb-201ENSMUST00000025262 Gm16486A0A1D5RMD1 1434 aa27.71■■■□□ 2.03
Ltb-201ENSMUST00000025262 Ccer2J3QPU5 274 aa27.71■■■□□ 2.03
Ltb-201ENSMUST00000025262 Frmpd2A0A140LI67 1392 aa27.7■■■□□ 2.02
Ltb-201ENSMUST00000025262 Rapgefl1Q68EF8 662 aa27.69■■■□□ 2.02
Ltb-201ENSMUST00000025262 Gpr150Q8BL07 427 aa27.69■■■□□ 2.02
Ltb-201ENSMUST00000025262 Zeb2Q9R0G7 1215 aa27.69■■■□□ 2.02
Ltb-201ENSMUST00000025262 GalcP54818 684 aa27.66■■■□□ 2.02
Ltb-201ENSMUST00000025262 Lrit1Q8K099 624 aa27.64■■■□□ 2.02
Ltb-201ENSMUST00000025262 Vars2Q3U2A8 1060 aa27.63■■■□□ 2.01
Ltb-201ENSMUST00000025262 Nphp4P59240 1425 aa27.61■■■□□ 2.01
Ltb-201ENSMUST00000025262 Idi2Q8BFZ6 227 aa27.61■■■□□ 2.01
Ltb-201ENSMUST00000025262 Gimap6Q8K349 305 aa27.61■■■□□ 2.01
Ltb-201ENSMUST00000025262 Snapc4Q8BP86 1333 aa27.61■■■□□ 2.01
Ltb-201ENSMUST00000025262 TonslQ6NZL6 1363 aa27.6■■■□□ 2.01
Ltb-201ENSMUST00000025262 Erbb3Q61526 1339 aa27.6■■■□□ 2.01
Ltb-201ENSMUST00000025262 Zcrb1Q9CZ96 217 aaKnown RBP27.59■■■□□ 2.01
Ltb-201ENSMUST00000025262 Ccdc85cE9Q6B2 420 aa27.58■■■□□ 2.01
Ltb-201ENSMUST00000025262 CatipB9EKE5 520 aa27.57■■■□□ 2
Ltb-201ENSMUST00000025262 Card10P58660 1021 aa27.57■■■□□ 2
Ltb-201ENSMUST00000025262 Gsto1O09131 240 aa27.56■■■□□ 2
Ltb-201ENSMUST00000025262 Ncoa4Q5U4H9 625 aa27.56■■■□□ 2
Ltb-201ENSMUST00000025262 Map3k19E9Q3S4 1311 aa27.56■■■□□ 2
Ltb-201ENSMUST00000025262 Mdc1Q5PSV9 1707 aa27.55■■■□□ 2
Ltb-201ENSMUST00000025262 Ubxn2bQ0KL01 331 aa27.55■■■□□ 2
Ltb-201ENSMUST00000025262 Nwd2Q6P5U7 1742 aa27.55■■■□□ 2
Ltb-201ENSMUST00000025262 Ppfibp2O35711 882 aa27.54■■■□□ 2
Ltb-201ENSMUST00000025262 CenpjQ569L8 1344 aa27.54■■■□□ 2
Ltb-201ENSMUST00000025262 Ankrd23Q812A3 306 aa27.53■■■□□ 2
Ltb-201ENSMUST00000025262 Amotl2Q8K371 772 aa27.53■■■□□ 2
Ltb-201ENSMUST00000025262 Gtf2e1Q9D0D5 440 aa27.53■■■□□ 2
Ltb-201ENSMUST00000025262 Ppef1O35655 650 aa27.5■■□□□ 1.99
Ltb-201ENSMUST00000025262 Vps33bP59016 617 aa27.5■■□□□ 1.99
Ltb-201ENSMUST00000025262 RgmbQ7TQ33 436 aa27.5■■□□□ 1.99
Ltb-201ENSMUST00000025262 Kat6bQ8BRB7 1872 aa27.5■■□□□ 1.99
Ltb-201ENSMUST00000025262 Kcnq2Q9Z351 759 aa27.48■■□□□ 1.99
Ltb-201ENSMUST00000025262 Ddb1Q3U1J4 1140 aaKnown RBP27.47■■□□□ 1.99
Ltb-201ENSMUST00000025262 Uhrf1bp1lA2RSJ4 1457 aa27.46■■□□□ 1.99
Ltb-201ENSMUST00000025262 Dnajc10Q9DC23 793 aa27.46■■□□□ 1.99
Ltb-201ENSMUST00000025262 TnrQ8BYI9 1358 aa27.46■■□□□ 1.99
Ltb-201ENSMUST00000025262 Nckap5lQ6GQX2 1323 aa27.45■■□□□ 1.99
Ltb-201ENSMUST00000025262 Yy1Q00899 414 aa27.45■■□□□ 1.98
Ltb-201ENSMUST00000025262 Akap11E9Q777 1895 aa27.44■■□□□ 1.98
Ltb-201ENSMUST00000025262 Gm21190A0A0G2JGJ6 266 aa27.43■■□□□ 1.98
Ltb-201ENSMUST00000025262 Prdm10Q3UTQ7 1184 aa27.43■■□□□ 1.98
Ltb-201ENSMUST00000025262 Pim2Q62070 370 aa27.43■■□□□ 1.98
Ltb-201ENSMUST00000025262 Zcwpw1Q6IR42 630 aa27.43■■□□□ 1.98
Ltb-201ENSMUST00000025262 Zbtb4Q5F293 982 aa27.42■■□□□ 1.98
Ltb-201ENSMUST00000025262 FanciQ8K368 1330 aa27.41■■□□□ 1.98
Ltb-201ENSMUST00000025262 Eid3Q3V124 375 aa27.4■■□□□ 1.98
Ltb-201ENSMUST00000025262 Znf335A2A5K6 1337 aa27.4■■□□□ 1.98
Ltb-201ENSMUST00000025262 Bsdc1Q80Y55 427 aa27.38■■□□□ 1.97
Ltb-201ENSMUST00000025262 Exosc9Q9JHI7 438 aaKnown RBP27.38■■□□□ 1.97
Ltb-201ENSMUST00000025262 Arhgap33Q80YF9 1305 aa27.37■■□□□ 1.97
Ltb-201ENSMUST00000025262 Lrp5Q91VN0 1614 aa27.35■■□□□ 1.97
Ltb-201ENSMUST00000025262 Neurod1Q60867 357 aa27.35■■□□□ 1.97
Ltb-201ENSMUST00000025262 Dennd6aQ8BH65 605 aa27.35■■□□□ 1.97
Ltb-201ENSMUST00000025262 Kcnh5Q920E3 988 aa27.35■■□□□ 1.97
Retrieved 100 of 22,080 RNA–protein pairs in 151 ms