RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Gtf3c5Q8R2T8 520 aa15.29■□□□□ 0.04
Ufd1-201ENSMUST00000005394 Gli3Q61602 1583 aa15.29■□□□□ 0.04
Ufd1-201ENSMUST00000005394 Pank1Q8K4K6 548 aa15.28■□□□□ 0.04
Ufd1-201ENSMUST00000005394 Iqsec2Q5DU25 1478 aa15.28■□□□□ 0.04
Ufd1-201ENSMUST00000005394 Itsn1Q9Z0R4 1714 aa15.27■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Stk24Q99KH8 431 aa15.27■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Ino80Q6ZPV2 1559 aa15.27■□□□□ 0.03
Ufd1-201ENSMUST00000005394 KarsQ99MN1 595 aaKnown RBP15.26■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Cep152A2AUM9 1736 aaKnown RBP15.26■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Myom1Q62234 1667 aaKnown RBP15.26■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Neurod2Q62414 383 aa15.25■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Naip7Q9JIB3 1402 aa15.25■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Nlrp6Q91WS2 869 aa15.25■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Efcab6Q6P1E8 1516 aa15.25■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Terf2O35144 541 aa15.24■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Hspa1lP16627 641 aa15.24■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Zbtb4Q5F293 982 aa15.24■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Znf316Q6PGE4 1016 aa15.24■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Ssh1Q76I79 1042 aa15.24■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Ncapd2Q8K2Z4 1392 aa15.23■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Nrxn3Q6P9K9 1571 aa15.23■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Catsper2A2ARP9 588 aa15.23■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Paxip1Q6NZQ4 1056 aa15.23■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Tex2Q6ZPJ0 1128 aaKnown RBP15.23■□□□□ 0.03
Ufd1-201ENSMUST00000005394 PzpQ61838 1495 aa15.22■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Psme1P97371 249 aa15.22■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Ddrgk1Q80WW9 315 aa15.22■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Kif2cQ922S8 721 aa15.22■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Iqgap3F8VQ29 1632 aa15.22■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Tecpr2Q3UH45 1423 aa15.21■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Il4rP16382 810 aa15.21■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Tpm2P58774 284 aa15.21■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Clcn1Q64347 994 aa15.21■□□□□ 0.03
Ufd1-201ENSMUST00000005394 Prdm2A2A7B5 1709 aaKnown RBP15.2■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Nphp4P59240 1425 aa15.2■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Gas2l2Q5SSG4 860 aa15.2■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Map7O88735 730 aa15.19■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Rbm25B2RY56 838 aaKnown RBP15.18■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Ddit3P35639 168 aa15.18■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Sall3Q62255 1320 aa15.18■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Adgrl1Q80TR1 1466 aa15.18■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Gemin5Q8BX17 1502 aaKnown RBP15.18■□□□□ 0.02
Ufd1-201ENSMUST00000005394 PogkQ80TC5 607 aa15.18■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Prrc2bQ7TPM1 1486 aaKnown RBP15.17■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Uggt1Q6P5E4 1551 aa15.17■□□□□ 0.02
Ufd1-201ENSMUST00000005394 DnmbpQ6TXD4 1580 aa15.17■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Bcl11bQ99PV8 884 aa15.17■□□□□ 0.02
Ufd1-201ENSMUST00000005394 ErbinQ80TH2 1402 aa15.17■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Eif2ak4Q9QZ05 1648 aa15.17■□□□□ 0.02
Ufd1-201ENSMUST00000005394 IbtkQ6ZPR6 1352 aaKnown RBP15.16■□□□□ 0.02
Ufd1-201ENSMUST00000005394 IghaA0A0A6YXW6 389 aa15.16■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Med1Q925J9 1575 aa15.16■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Gm10093D3YYI8 482 aa15.15■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Hdac1O09106 482 aaKnown RBP15.15■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Gtf2e1Q9D0D5 440 aa15.15■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Zc3h13E9Q784 1729 aaKnown RBP15.15■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Myo3aQ8K3H5 1613 aa15.15■□□□□ 0.02
Ufd1-201ENSMUST00000005394 Zfp777B9EKF4 885 aa15.14■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Spryd3E9Q9B3 442 aa15.14■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Rsph3aQ3UFY4 516 aa15.14■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Rtn4Q99P72 1162 aaKnown RBP15.14■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Rims1Q99NE5 1463 aa15.13■□□□□ 0.01
Ufd1-201ENSMUST00000005394 PplQ9R269 1755 aa15.13■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Pdcl2Q78Y63 240 aa15.13■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Ccar1Q8CH18 1146 aaKnown RBP15.13■□□□□ 0.01
Ufd1-201ENSMUST00000005394 ScaperF8VQ70 1398 aaKnown RBP15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Mroh1E0CZ22 1640 aa15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Nom1Q3UFM5 854 aaKnown RBP15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Kdm4cQ8VCD7 1054 aa15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Lmtk3Q5XJV6 1424 aa15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 PalldQ9ET54 1408 aa15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 AatkQ80YE4 1365 aa15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Asxl2Q8BZ32 1370 aa15.12■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Znf692Q3U381 531 aa15.11■□□□□ 0.01
Ufd1-201ENSMUST00000005394 GsdmaQ9EST1 446 aa15.11■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Trim44Q9QXA7 346 aa15.11■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Mfap1aC0HKD8 439 aaKnown RBP15.11■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Mfap1bC0HKD9 439 aaKnown RBP15.11■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Atp1b4Q99ME6 356 aa15.11■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Abca8aQ8K442 1620 aa15.1■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Cdk5rap2Q8K389 1822 aa15.1■□□□□ 0.01
Ufd1-201ENSMUST00000005394 NgefQ8CHT1 710 aa15.1■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Sipa1l1Q8C0T5 1782 aa15.09■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Ehbp1l1Q99MS7 1716 aa15.09■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Gm20521D3Z5F7 333 aa15.09■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Pnmal2G3X9N3 661 aa15.09■□□□□ 0.01
Ufd1-201ENSMUST00000005394 Znf541Q0GGX2 1363 aa15.09■□□□□ 0.01
Ufd1-201ENSMUST00000005394 ArxO35085 564 aa15.08■□□□□ 0
Ufd1-201ENSMUST00000005394 Dusp27Q148W8 1138 aa15.08■□□□□ 0
Ufd1-201ENSMUST00000005394 Amigo3Q8C2S7 508 aa15.08■□□□□ 0
Ufd1-201ENSMUST00000005394 Ciz1Q8VEH2 845 aa15.08■□□□□ 0
Ufd1-201ENSMUST00000005394 Atxn3Q9CVD2 355 aa15.08■□□□□ 0
Ufd1-201ENSMUST00000005394 Plcb2A3KGF7 1181 aa15.07■□□□□ 0
Ufd1-201ENSMUST00000005394 KnstrnQ9D9Z1 312 aaKnown RBP15.07■□□□□ 0
Ufd1-201ENSMUST00000005394 Kdm2aP59997 1161 aa15.07■□□□□ 0
Ufd1-201ENSMUST00000005394 Usp40Q8BWR4 1235 aa15.07■□□□□ 0
Ufd1-201ENSMUST00000005394 Kif18aQ91WD7 886 aa15.07■□□□□ 0
Ufd1-201ENSMUST00000005394 Thsd7aQ69ZU6 1645 aa15.06■□□□□ 0
Ufd1-201ENSMUST00000005394 Cald1E9QA15 768 aaKnown RBP15.06■□□□□ 0
Ufd1-201ENSMUST00000005394 Wwc1Q5SXA9 1104 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 127.1 ms