RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 HOXD9P28356 352 aaPredicted RBP16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 KCTD19Q17RG1 926 aaPredicted RBP16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 LONRF2Q1L5Z9 754 aa16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 LY6G5CQ5SRR4 150 aa16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 C1orf228Q6PIY5 440 aa16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 RTL3Q8N8U3 475 aaKnown RBP16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 AP1M1Q9BXS5 423 aa16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 EBF3Q9H4W6 596 aa16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 TMEM248Q9NWD8 314 aa16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 EFR3BQ9Y2G0 817 aa16.77■□□□□ 0.27
TNFAIP2-205ENST00000559406 WASH4PA8MWX3 477 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 PGRMC1O00264 195 aaKnown RBP16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 DAPK3O43293 454 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 ECI2O75521 394 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 CYP17A1P05093 508 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 RHOQP17081 205 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 HTR7P34969 479 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 CHKAP35790 457 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 NUMBP49757 651 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 ZNF135P52742 658 aaPredicted RBP16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 FAM182AQ5T1J6 154 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 ACBD5Q5T8D3 534 aaPredicted RBP16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 RNF43Q68DV7 783 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 B4GALNT4Q76KP1 1039 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 ARHGAP12Q8IWW6 846 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 ATG4AQ8WYN0 398 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 TMA16Q96EY4 203 aaKnown RBP16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 SPHK2Q9NRA0 654 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 TBC1D14Q9P2M4 693 aa16.76■□□□□ 0.27
TNFAIP2-205ENST00000559406 KIAA1549LQ6ZVL6 1849 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 APOL1O14791 398 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 PSMC3P17980 439 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 PAFAH1B3Q15102 231 aaKnown RBP16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 DHCR24Q15392 516 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 GAB4Q2WGN9 574 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 RABGAP1LQ5R372 815 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 PRELID2Q8N945 189 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 IRF7Q92985 503 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 CELF6Q96J87 481 aaKnown RBP16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 DDX50Q9BQ39 737 aaKnown RBP16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 MAK16Q9BXY0 300 aaKnown RBP16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 DTLQ9NZJ0 730 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 LIMD1Q9UGP4 676 aa16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
TNFAIP2-205ENST00000559406 ARNTLO00327 626 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 FGF10O15520 208 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 PENKP01210 267 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 IFNAR2P48551 515 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 MPPE1Q53F39 396 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 CXorf57Q6NSI4 855 aaKnown RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 MTSS1LQ765P7 747 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 KIAA1958Q8N8K9 716 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 HJURPQ8NCD3 748 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 LRRN4CLQ8ND94 238 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 DDI1Q8WTU0 396 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 C1orf54Q8WWF1 131 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 OTUB2Q96DC9 234 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 CATSPERBQ9H7T0 1116 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 L2HGDHQ9H9P8 463 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 HEY1Q9Y5J3 304 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 A0A1B0GVM2 712 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 TCAF2A6NFQ2 919 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 NEDD8-MDP1E9PL57 170 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 SLC9A3R1O14745 358 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 TJP3O95049 919 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 ASGR2P07307 311 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 CETN2P41208 172 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 CDH4P55283 916 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 OTUD4Q01804 1114 aaKnown RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 TFDP2Q14188 446 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 AAK1Q2M2I8 961 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 AFMIDQ63HM1 303 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 TMCO3Q6UWJ1 677 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 C12orf40Q86WS4 652 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 TTC8Q8TAM2 541 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 ACTL9Q8TC94 416 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 CHFRQ96EP1 664 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 C10orf88Q9H8K7 445 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 KCNK12Q9HB15 430 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 GTSE1Q9NYZ3 720 aa16.74■□□□□ 0.27
TNFAIP2-205ENST00000559406 APOC4-APOC2K7ER74 178 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 TRIM24O15164 1050 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 APOC2P02655 101 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 GDI1P31150 447 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 NAIF1Q69YI7 327 aaPredicted RBP16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 ARHGAP36Q6ZRI8 547 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 CHST9Q7L1S5 443 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 CARNMT1Q8N4J0 409 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 DEPDC1BQ8WUY9 529 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 OLFM3Q96PB7 478 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 BBS2Q9BXC9 721 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 SLC39A8Q9C0K1 460 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 LRRC19Q9H756 370 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 MARK1Q9P0L2 795 aa16.73■□□□□ 0.27
TNFAIP2-205ENST00000559406 A0A0D9SEW6 157 aa16.72■□□□□ 0.27
TNFAIP2-205ENST00000559406 LOC730098B7Z3J9 87 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms