RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MAD2L1Q13257 205 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 POU6F1Q14863 301 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 BSNDQ8WZ55 320 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 GMLQ99445 158 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 FGFBP2Q9BYJ0 223 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 ULBP1Q9BZM6 244 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 ZCCHC2Q9C0B9 1178 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 CHST7Q9NS84 486 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 NQO1P15559 274 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 CCNG1P51959 295 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 RASA2Q15283 850 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 ERAP2Q6P179 960 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 HIPK4Q8NE63 616 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 HEY2Q9UBP5 337 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 APPL1Q9UKG1 709 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 BCLAF3A2AJT9 711 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 BIRC5O15392 142 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 IGSF6O95976 241 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 RDH11Q8TC12 318 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 CATSPERZQ9NTU4 200 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TAGLN3Q9UI15 199 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 MGAT1P26572 445 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 RPL7AP62424 266 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 ZNF284Q2VY69 593 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 GLT6D1Q7Z4J2 308 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 JADE3Q92613 823 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 SNRNP25Q9BV90 132 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 SYN3O14994 580 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 CCNB1P14635 433 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TRMT5Q32P41 509 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 LCA5Q86VQ0 697 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 GPAMQ9HCL2 828 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 MRPL17Q9NRX2 175 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TRAV19A0A0A6YYK7 116 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 SOWAHBA6NEL2 793 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PSMA4P25789 261 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PIK3CGP48736 1102 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TMEM199Q8N511 208 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 C2orf15Q8WU43 125 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 ADGRA2Q96PE1 1338 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 C2orf49Q9BVC5 232 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 KCNK4Q9NYG8 393 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 CYP2A6P11509 494 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 MLNP12872 115 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TARSP26639 723 aaKnown RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 BTG3Q14201 252 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 STK32AQ8WU08 396 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 B2RBV5 119 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TPSB2P20231 275 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TUSC3Q13454 348 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 TPSAB1Q15661 275 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 MFSD5Q6N075 450 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PLXNB2O15031 1838 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 CSH1P0DML2 217 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 CSH2P0DML3 217 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 ENO3P13929 434 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PTPN7P35236 360 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 MSLNQ13421 630 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-208ENST00000430669 KRT72Q14CN4 511 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 HECTD3Q5T447 861 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 XYLT1Q86Y38 959 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 MYLPFQ96A32 169 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 DCLRE1BQ9H816 532 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 MOSPD1Q9UJG1 213 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PLA2G4CQ9UP65 541 aa11.78□□□□□ -0.52
PTCH1-208ENST00000430669 PPP3CCP48454 512 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 USP45Q70EL2 814 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 MON1AQ86VX9 555 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 TCP10LQ8TDR4 215 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 NXF3Q9H4D5 531 aaKnown RBP11.77□□□□□ -0.52
PTCH1-208ENST00000430669 NOCTQ9UK39 431 aaKnown RBP11.77□□□□□ -0.52
PTCH1-208ENST00000430669 BLOC1S6Q9UL45 172 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 USP20Q9Y2K6 914 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 RBL1P28749 1068 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 KPNB1Q14974 876 aaKnown RBP11.77□□□□□ -0.52
PTCH1-208ENST00000430669 PRAMEF19Q5SWL8 479 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 FAM117BQ6P1L5 589 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 SLC4A11Q8NBS3 891 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 SNX5Q9Y5X3 404 aa11.77□□□□□ -0.52
PTCH1-208ENST00000430669 PEX5P50542 639 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 SCNN1GP51170 649 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 KLC1Q07866 573 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 C15orf59Q2T9L4 293 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 DRICH1Q6PGQ1 229 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 SLC24A5Q71RS6 500 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 DNAAF5Q86Y56 855 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 CASS4Q9NQ75 786 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 LRRC37AA6NMS7 1700 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF536O15090 1300 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms