RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 TACR2P21452 398 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 CCR1P32246 355 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 CSKP41240 450 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 ST8SIA6P61647 398 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 KCNMA1Q12791 1236 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 SLC14A1Q13336 389 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 SLC12A1Q13621 1099 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 HNRNPA1L2Q32P51 320 aaKnown RBP18.36■□□□□ 0.53
HDDC3-201ENST00000330334 PLEKHG6Q3KR16 790 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 TTC39BQ5VTQ0 682 aaPredicted RBP18.36■□□□□ 0.53
HDDC3-201ENST00000330334 OLFML1Q6UWY5 402 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 SLC26A9Q7LBE3 791 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 LGI2Q8N0V4 545 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 DEFB106AQ8N104 65 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 CARNMT1Q8N4J0 409 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 HDDC3Q8N4P3 179 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 C1orf131Q8NDD1 294 aaKnown RBP18.36■□□□□ 0.53
HDDC3-201ENST00000330334 ZNF397Q8NF99 534 aaPredicted RBP18.36■□□□□ 0.53
HDDC3-201ENST00000330334 CEP192Q8TEP8 1941 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 PRMT1Q99873 361 aaKnown RBP18.36■□□□□ 0.53
HDDC3-201ENST00000330334 SLC32A1Q9H598 525 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 LMBRD1Q9NUN5 540 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 AJAP1Q9UKB5 411 aaPredicted RBP18.36■□□□□ 0.53
HDDC3-201ENST00000330334 SCML1Q9UN30 329 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 CEP83Q9Y592 693 aa18.36■□□□□ 0.53
HDDC3-201ENST00000330334 GIPC1O14908 333 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 OPHN1O60890 802 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 MOCS3O95396 460 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 ABCB4P21439 1286 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 EEF1GP26641 437 aaKnown RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 CDH5P33151 784 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 ANP32AP39687 249 aaKnown RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 OXCT1P55809 520 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 RPS14P62263 151 aaKnown RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 PITX1P78337 314 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 SLC6A3Q01959 620 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 TCP11X2Q5H9J9 407 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 FSCBQ5H9T9 825 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 PITRM1Q5JRX3 1037 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 KLHDC7AQ5VTJ3 777 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 RAP1GAP2Q684P5 730 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 CHSY1Q86X52 802 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 PASD1Q8IV76 773 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 CFAP52Q8N1V2 620 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 MINDY1Q8N5J2 469 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 MRGPRX3Q96LB0 322 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 GTPBP2Q9BX10 602 aaKnown RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 NAA15Q9BXJ9 866 aaKnown RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 RSPH9Q9H1X1 276 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-201ENST00000330334 DDIT4Q9NX09 232 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 RRN3Q9NYV6 651 aa18.35■□□□□ 0.53
HDDC3-201ENST00000330334 TARSL2A2RTX5 802 aaKnown RBP18.34■□□□□ 0.53
HDDC3-201ENST00000330334 MEI4A8MW99 385 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 F5H5T6 163 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 H0Y626 953 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 MAOBP27338 520 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 NOS2P35228 1153 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 SCNN1AP37088 669 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 PLK1P53350 603 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 SFSWAPQ12872 951 aaKnown RBP18.34■□□□□ 0.53
HDDC3-201ENST00000330334 HNRNPDQ14103 355 aaKnown RBP18.34■□□□□ 0.53
HDDC3-201ENST00000330334 KCNJ12Q14500 433 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 DRAP1Q14919 205 aaPredicted RBP18.34■□□□□ 0.53
HDDC3-201ENST00000330334 PTPN20Q4JDL3 420 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 DCAF12L1Q5VU92 463 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 ZNF776Q68DI1 518 aaPredicted RBP18.34■□□□□ 0.53
HDDC3-201ENST00000330334 OR6B2Q6IFH4 312 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 FAM183BPQ6ZVS7 135 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 USP30Q70CQ3 517 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 ZNF366Q8N895 744 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 TMEM35BQ8NCS4 154 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 C1orf216Q8TAB5 229 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 ENOX1Q8TC92 643 aaKnown RBP18.34■□□□□ 0.53
HDDC3-201ENST00000330334 FAM204AQ9H8W3 233 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 SAMSN1Q9NSI8 373 aaKnown RBP18.34■□□□□ 0.53
HDDC3-201ENST00000330334 ERVW-1Q9UQF0 538 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 PCNX2A6NKB5 2137 aa18.34■□□□□ 0.53
HDDC3-201ENST00000330334 PCDH15Q96QU1 1955 aa18.33■□□□□ 0.53
HDDC3-201ENST00000330334 MUC22E2RYF6 1773 aaPredicted RBP18.33■□□□□ 0.53
HDDC3-201ENST00000330334 ITIH6Q6UXX5 1313 aa18.33■□□□□ 0.53
HDDC3-201ENST00000330334 BCAT2O15382 392 aaPredicted RBP18.33■□□□□ 0.52
HDDC3-201ENST00000330334 GJB3O75712 270 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 DNTTP04053 509 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 ERBB2P04626 1255 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 UCHL3P15374 230 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 CYP11B1P15538 503 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 GABRB2P47870 512 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 VASPP50552 380 aaPredicted RBP18.33■□□□□ 0.52
HDDC3-201ENST00000330334 ECT2LQ008S8 904 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 SULT2A1Q06520 285 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 ZNF252P-AS1Q0IIN9 211 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 TTC31Q49AM3 519 aaPredicted RBP18.33■□□□□ 0.52
HDDC3-201ENST00000330334 RABGAP1LQ5R372 815 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 PPP1R9BQ96SB3 815 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 STK33Q9BYT3 514 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 BTBD1Q9H0C5 482 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 SYNCQ9H7C4 482 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 SGK2Q9HBY8 427 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 OSGEPQ9NPF4 335 aa18.33■□□□□ 0.52
HDDC3-201ENST00000330334 PLCB1Q9NQ66 1216 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms