RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 RAP1GAP2Q684P5 730 aa26.66■■□□□ 1.86
TRIM28-204ENST00000594806 Q6ZS52 159 aa26.66■■□□□ 1.86
TRIM28-204ENST00000594806 LGI2Q8N0V4 545 aa26.66■■□□□ 1.86
TRIM28-204ENST00000594806 USP33Q8TEY7 942 aa26.66■■□□□ 1.86
TRIM28-204ENST00000594806 FNIP1Q8TF40 1166 aa26.66■■□□□ 1.86
TRIM28-204ENST00000594806 P2RY11Q96G91 374 aa26.66■■□□□ 1.86
TRIM28-204ENST00000594806 TIMM44O43615 452 aa26.65■■□□□ 1.86
TRIM28-204ENST00000594806 PTPN5P54829 565 aa26.65■■□□□ 1.86
TRIM28-204ENST00000594806 RPL7AP62424 266 aaKnown RBP26.65■■□□□ 1.86
TRIM28-204ENST00000594806 ANGPT1Q15389 498 aa26.65■■□□□ 1.86
TRIM28-204ENST00000594806 C15orf59Q2T9L4 293 aaPredicted RBP26.65■■□□□ 1.86
TRIM28-204ENST00000594806 ASTE1Q2TB18 679 aaPredicted RBP26.65■■□□□ 1.86
TRIM28-204ENST00000594806 TRMT11Q7Z4G4 463 aaKnown RBP26.65■■□□□ 1.86
TRIM28-204ENST00000594806 FAM172AQ8WUF8 416 aa26.65■■□□□ 1.86
TRIM28-204ENST00000594806 CCDC42Q96M95 316 aa26.65■■□□□ 1.86
TRIM28-204ENST00000594806 PRICKLE1Q96MT3 831 aaPredicted RBP26.65■■□□□ 1.86
TRIM28-204ENST00000594806 PRMT8Q9NR22 394 aaPredicted RBP26.65■■□□□ 1.86
TRIM28-204ENST00000594806 NENFQ9UMX5 172 aa26.65■■□□□ 1.86
TRIM28-204ENST00000594806 AKR1B10O60218 316 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 MESP2Q0VG99 397 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 AUHQ13825 339 aaKnown RBP26.64■■□□□ 1.86
TRIM28-204ENST00000594806 EIF4HQ15056 248 aaKnown RBP26.64■■□□□ 1.86
TRIM28-204ENST00000594806 CDO1Q16878 200 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 C5orf22Q49AR2 442 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 C10orf76Q5T2E6 689 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 ANKS1BQ7Z6G8 1248 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 TC2NQ8N9U0 490 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 FIBINQ8TAL6 211 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 WFIKKN2Q8TEU8 576 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 NCAPGQ9BPX3 1015 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 HS3ST4Q9Y661 456 aa26.64■■□□□ 1.86
TRIM28-204ENST00000594806 TMEM191CA6NGB0 347 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 NPC1O15118 1278 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 CDC25BP30305 580 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 KIR2DL1P43626 348 aaPredicted RBP26.63■■□□□ 1.85
TRIM28-204ENST00000594806 SGSHP51688 502 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 RPS24P62847 133 aaKnown RBP26.63■■□□□ 1.85
TRIM28-204ENST00000594806 ZNF528Q3MIS6 628 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 SYT13Q7L8C5 426 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 FAM131BQ86XD5 332 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.63■■□□□ 1.853e-6■■■■■ 42.5
TRIM28-204ENST00000594806 RPLP0P6Q8NHW5 317 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 UCMAQ8WVF2 138 aa26.63■■□□□ 1.85
TRIM28-204ENST00000594806 NHEJ1Q9H9Q4 299 aaPredicted RBP26.63■■□□□ 1.85
TRIM28-204ENST00000594806 TRIM24O15164 1050 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 LUC7L3O95232 432 aaKnown RBP26.62■■□□□ 1.85
TRIM28-204ENST00000594806 ADRA1BP35368 520 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 ATXN1P54253 815 aaKnown RBP26.62■■□□□ 1.85
TRIM28-204ENST00000594806 AIF1P55008 147 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 OXCT1P55809 520 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 HDAC4P56524 1084 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 GFPT1Q06210 699 aaPredicted RBP26.62■■□□□ 1.85
TRIM28-204ENST00000594806 FBXL22Q6P050 247 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 LRRC31Q6UY01 552 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 KIAA0907Q7Z7F0 614 aaPredicted RBP26.62■■□□□ 1.85
TRIM28-204ENST00000594806 MFN1Q8IWA4 741 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 PRSS33Q8NF86 280 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 NTAN1Q96AB6 310 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 CHP1Q99653 195 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 FAM126AQ9BYI3 521 aaPredicted RBP26.62■■□□□ 1.85
TRIM28-204ENST00000594806 SIK2Q9H0K1 926 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 STIM2Q9P246 746 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 CLEC4EQ9ULY5 219 aa26.62■■□□□ 1.85
TRIM28-204ENST00000594806 A0A1B0GVM2 712 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 TCAF2A6NFQ2 919 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 CCP110O43303 1012 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 ATMINO43313 823 aaPredicted RBP26.61■■□□□ 1.85
TRIM28-204ENST00000594806 SEC13P55735 322 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 TCF15Q12870 199 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 CDH18Q13634 790 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 ACAP1Q15027 740 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 C2orf27AQ580R0 203 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 SH3PXD2AQ5TCZ1 1133 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 DNAAF5Q86Y56 855 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 RPRD1AQ96P16 312 aaPredicted RBP26.61■■□□□ 1.85
TRIM28-204ENST00000594806 PANX2Q96RD6 677 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 THAP2Q9H0W7 228 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 OSBPL2Q9H1P3 480 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 ANLNQ9NQW6 1124 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 MYO1AQ9UBC5 1043 aa26.61■■□□□ 1.85
TRIM28-204ENST00000594806 PRRT4C9JH25 899 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 CYP1A2P05177 515 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 PSMA2P25787 234 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 HLA-FP30511 346 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 HOXA6P31267 233 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 GALCP54803 685 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 NRLP54845 237 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 NRG1Q02297 640 aaPredicted RBP26.6■■□□□ 1.85
TRIM28-204ENST00000594806 EOGTQ5NDL2 527 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 CHST9Q7L1S5 443 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 MAML2Q8IZL2 1156 aaPredicted RBP26.6■■□□□ 1.85
TRIM28-204ENST00000594806 AHI1Q8N157 1196 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 CFAP52Q8N1V2 620 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 ZNF513Q8N8E2 541 aaPredicted RBP26.6■■□□□ 1.85
TRIM28-204ENST00000594806 MYEOVQ96EZ4 313 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 PPP1R9BQ96SB3 815 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 RETREG1Q9H6L5 497 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 IMPACTQ9P2X3 320 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 VANGL2Q9ULK5 521 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 MMP17Q9ULZ9 603 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms