RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 DCDC5Q6ZRR9 648 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 DDHD1Q8NEL9 900 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 BIRC8Q96P09 236 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 CYP26B1Q9NR63 512 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 ARHGAP28Q9P2N2 729 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 ARHGAP26Q9UNA1 814 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 OXSR1O95747 527 aaPredicted RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 ZBED1O96006 694 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 FASTKD1Q53R41 847 aaKnown RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 GPAT2Q6NUI2 795 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 CENPSQ8N2Z9 138 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 LZTR1Q8N653 840 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 SLC35B2Q8TB61 432 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 KCNN1Q92952 543 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 NLRP4Q96MN2 994 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 NEURL2Q9BR09 285 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 HAPLN2Q9GZV7 340 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 SEMA6AQ9H2E6 1030 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 EPS15L1Q9UBC2 864 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 RNF11Q9Y3C5 154 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 E7ESA3 106 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 NDUFB5O43674 189 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 RFPL1O75677 317 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 ASNSP08243 561 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 KPNA1P52294 538 aaPredicted RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 C21orf59P57076 290 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 BAATQ14032 418 aaPredicted RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 TMEM214Q6NUQ4 689 aaKnown RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 USP13Q92995 863 aaPredicted RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 DDX56Q9NY93 547 aaKnown RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 PCSK1NQ9UHG2 260 aa17.98■□□□□ 0.47
PMS1-206ENST00000418224 FAM32AQ9Y421 112 aaKnown RBP17.98■□□□□ 0.47
PMS1-206ENST00000418224 K7ERI5 159 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 COX4I1P13073 169 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 IDH3AP50213 366 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 LRRC38Q5VT99 294 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 KRT80Q6KB66 452 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 CCDC60Q8IWA6 550 aaPredicted RBP17.97■□□□□ 0.47
PMS1-206ENST00000418224 TMEM35BQ8NCS4 154 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 FBXO40Q9UH90 709 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 KLHL41O60662 606 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 STAM2O75886 525 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 DGKIO75912 1065 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 XRCC1P18887 633 aaPredicted RBP17.97■□□□□ 0.47
PMS1-206ENST00000418224 TCN1P20061 433 aaPredicted RBP17.97■□□□□ 0.47
PMS1-206ENST00000418224 SLC1A6P48664 564 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 NUDT2P50583 147 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 PIGHQ14442 188 aaPredicted RBP17.97■□□□□ 0.47
PMS1-206ENST00000418224 ZNF423Q2M1K9 1284 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 EME1Q96AY2 570 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 RANBP9Q96S59 729 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 CDRT15Q96T59 188 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 TRPC7Q9HCX4 862 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 SUN2Q9UH99 717 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 RIMS3Q9UJD0 308 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 CNTNAP1P78357 1384 aa17.97■□□□□ 0.47
PMS1-206ENST00000418224 ARHGEF37A1IGU5 675 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 PPARGP37231 505 aaPredicted RBP17.96■□□□□ 0.47
PMS1-206ENST00000418224 CLDN10P78369 228 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 MAVSQ7Z434 540 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 ADCY4Q8NFM4 1077 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 PLEKHA8Q96JA3 519 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 SLC9A2Q9UBY0 812 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 J3QRK9 145 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 PSMD12O00232 456 aaPredicted RBP17.96■□□□□ 0.47
PMS1-206ENST00000418224 CST3P01034 146 aaPredicted RBP17.96■□□□□ 0.47
PMS1-206ENST00000418224 PSAPP07602 524 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 EPHA3P29320 983 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 USP41Q3LFD5 358 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 PTAR1Q7Z6K3 402 aaPredicted RBP17.96■□□□□ 0.47
PMS1-206ENST00000418224 RFX6Q8HWS3 928 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 CATSPER1Q8NEC5 780 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 BHLHE22Q8NFJ8 381 aaPredicted RBP17.96■□□□□ 0.47
PMS1-206ENST00000418224 FBXL8Q96CD0 374 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 KLC2Q9H0B6 622 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 SLC38A10Q9HBR0 1119 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 CDC14AQ9UNH5 594 aa17.96■□□□□ 0.47
PMS1-206ENST00000418224 CSDE1O75534 798 aaKnown RBP17.96■□□□□ 0.46
PMS1-206ENST00000418224 NR3C2P08235 984 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 PTPN1P18031 435 aaKnown RBP17.96■□□□□ 0.46
PMS1-206ENST00000418224 CDH3P22223 829 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 FGFR3P22607 806 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 RFC1P35251 1148 aaPredicted RBP17.96■□□□□ 0.46
PMS1-206ENST00000418224 SERPINB5P36952 375 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 THOP1P52888 689 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 EMC2Q15006 297 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 LGSNQ5TDP6 509 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 AGR3Q8TD06 166 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 C12orf43Q96C57 262 aaKnown RBP17.96■□□□□ 0.46
PMS1-206ENST00000418224 CGRRF1Q99675 332 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 GCOM2Q9BZD3 368 aaPredicted RBP17.96■□□□□ 0.46
PMS1-206ENST00000418224 ITGB1BP2Q9UKP3 347 aa17.96■□□□□ 0.46
PMS1-206ENST00000418224 CD19P15391 556 aa17.95■□□□□ 0.46
PMS1-206ENST00000418224 HMOX2P30519 316 aa17.95■□□□□ 0.46
PMS1-206ENST00000418224 PPP2R5DQ14738 602 aa17.95■□□□□ 0.46
PMS1-206ENST00000418224 PPP1R2P3Q6NXS1 205 aa17.95■□□□□ 0.46
PMS1-206ENST00000418224 DHRS4L2Q6PKH6 230 aa17.95■□□□□ 0.46
PMS1-206ENST00000418224 EMC1Q8N766 993 aa17.95■□□□□ 0.46
PMS1-206ENST00000418224 ZSCAN18Q8TBC5 510 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms