RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 WDR27A2RRH5 827 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 MTMR11A4FU01 709 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 DRG2P55039 364 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 BTBD8Q5XKL5 378 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 ZNF280DQ6N043 979 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 KIAA1841Q6NSI8 718 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 SPRED2Q7Z698 418 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 TTC16Q8NEE8 873 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 CCDC110Q8TBZ0 833 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 ZNF473Q8WTR7 871 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 RNF139Q8WU17 664 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 HOMER3Q9NSC5 361 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 PCDHB5Q9Y5E4 795 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 MCF2LO15068 1137 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 FBXO21O94952 628 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 TIMP1P01033 207 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 DESP17661 470 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 BASP1P80723 227 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 BTG3Q14201 252 aaPredicted RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 PDK2Q15119 407 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 MAPRE1Q15691 268 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 NCBP2-AS2Q69YL0 99 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 KCNT2Q6UVM3 1135 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 SUGP1Q8IWZ8 645 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 DCP1BQ8IZD4 617 aaKnown RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 OTUD6BQ8N6M0 293 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 FBXO22Q8NEZ5 403 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 NKD2Q969F2 451 aaPredicted RBP18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 ARHGEF4Q9NR80 690 aa18.86■□□□□ 0.61
SNAPC3-207ENST00000610884 GOLGA6L10A6NI86 522 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 HMGB1P1B2RPK0 211 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 SCAMP3O14828 347 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 MFSD11O43934 449 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 AVILO75366 819 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 ITGAVP06756 1048 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 WDR5P61964 334 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 NOMO1Q15155 1222 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 RASIP1Q5U651 963 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 NECAB2Q7Z6G3 386 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 TEKT4Q8WW24 435 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 TXLNGYQ9BZA5 131 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 PIH1D1Q9NWS0 290 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 H0YGN5 161 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 MDH1P40925 334 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 CTCFP49711 727 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 RHBDF2Q6PJF5 856 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 MRRFQ96E11 262 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 IGSF21Q96ID5 467 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 CELF6Q96J87 481 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 USP29Q9HBJ7 922 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 DTLQ9NZJ0 730 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 OR12D3Q9UGF7 316 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 FBXW11Q9UKB1 542 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 NFS1Q9Y697 457 aa18.85■□□□□ 0.61
SNAPC3-207ENST00000610884 SYN3O14994 580 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 PPFIA2O75334 1257 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 ITIH2P19823 946 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 HNRNPH1P31943 449 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 ROR1Q01973 937 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 ZNF844Q08AG5 666 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 TAF10Q12962 218 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 BNIPLQ7Z465 357 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 NLRP14Q86W24 1093 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 ANKMY2Q8IV38 441 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 NUP93Q8N1F7 819 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 TMEM106CQ9BVX2 250 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 CDC42EP4Q9H3Q1 356 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 SEPT10Q9P0V9 454 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 TANC1Q9C0D5 1861 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 ATXN2Q99700 1313 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 E7EVH7 732 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 H0YHG0 523 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 SCNN1AP37088 669 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 SLC9A4Q6AI14 798 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 RWDD4Q6NW29 188 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 ARCQ7LC44 396 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 CCNYQ8ND76 341 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 SEZ6LQ9BYH1 1024 aa18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 DRG1Q9Y295 367 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-207ENST00000610884 EEF2KO00418 725 aaKnown RBP18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 SEC24AO95486 1093 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 ATF6P18850 670 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 ARL4AP40617 200 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 EFEMP1Q12805 493 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 TFDP2Q14188 446 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 MSS51Q4VC12 460 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 EFHC2Q5JST6 749 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 NPWQ8N729 165 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 BADQ92934 168 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 CCT8L2Q96SF2 557 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 CLSTN3Q9BQT9 956 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 ZNF670Q9BS34 389 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 MRPL9Q9BYD2 267 aaKnown RBP18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 TMBIM4Q9HC24 238 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 PPANQ9NQ55 473 aaKnown RBP18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 WHRNQ9P202 907 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 MTRF1LQ9UGC7 380 aaKnown RBP18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 EFR3BQ9Y2G0 817 aa18.83■□□□□ 0.61
SNAPC3-207ENST00000610884 MYZAPP0CAP1 466 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms