RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CACNG3O60359 315 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 RTN2O75298 545 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 KRT3P12035 628 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 TYRP14679 529 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 MPPE1Q53F39 396 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 FSTL4Q6MZW2 842 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 MAMSTRQ6ZN01 415 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 SND1Q7KZF4 910 aaKnown RBP eCLIP26.77■■□□□ 1.88
TRIM28-204ENST00000594806 ATP6V0D2Q8N8Y2 350 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 DTWD2Q8NBA8 298 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 MRFAP1L1Q96HT8 127 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 BTN2A3PQ96KV6 586 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 SELENOOQ9BVL4 669 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 CHRDQ9H2X0 955 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 METTL5Q9NRN9 209 aaKnown RBP26.77■■□□□ 1.88
TRIM28-204ENST00000594806 ZNHIT6Q9NWK9 470 aaKnown RBP26.77■■□□□ 1.88
TRIM28-204ENST00000594806 DEC1Q9P2X7 70 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 A0A0A0MRY4 1105 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 SIGLEC16A6NMB1 481 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 NEDD8-MDP1E9PL57 170 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 AP5Z1O43299 807 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 PENKP01210 267 aaPredicted RBP26.76■■□□□ 1.87
TRIM28-204ENST00000594806 FLT3P36888 993 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 PITX1P78337 314 aaPredicted RBP26.76■■□□□ 1.87
TRIM28-204ENST00000594806 ZC3H12AQ5D1E8 599 aaKnown RBP26.76■■□□□ 1.87
TRIM28-204ENST00000594806 CNGA4Q8IV77 575 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 TRIM11Q96F44 468 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 HCN4Q9Y3Q4 1203 aa26.76■■□□□ 1.87
TRIM28-204ENST00000594806 KIAA1549LQ6ZVL6 1849 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 GFRA2O00451 464 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 APODP05090 189 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 ABCB4P21439 1286 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 SULT1E1P49888 294 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 BRMS1LQ5PSV4 323 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 MPP7Q5T2T1 576 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 FYB2Q5VWT5 728 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 RNF34Q969K3 372 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 SLC2A11Q9BYW1 496 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 ISCUQ9H1K1 167 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 TAS2R14Q9NYV8 317 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 ADAMTS1Q9UHI8 967 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 FBXO10Q9UK96 956 aa26.75■■□□□ 1.87
TRIM28-204ENST00000594806 TCRBV5S1A1TA0A578 114 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 ANKRD62A6NC57 917 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 KCNU1A8MYU2 1149 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 GALR2O43603 387 aaPredicted RBP26.74■■□□□ 1.87
TRIM28-204ENST00000594806 MFAP3LO75121 409 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 TULP3O75386 442 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 FTLP02792 175 aaPredicted RBP26.74■■□□□ 1.87
TRIM28-204ENST00000594806 MYBL1P10243 752 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 SDC4P31431 198 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 GRIA2P42262 883 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 CXCR3P49682 368 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 TBX2Q13207 712 aaPredicted RBP26.74■■□□□ 1.87
TRIM28-204ENST00000594806 NME3Q13232 169 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 ACBD5Q5T8D3 534 aaPredicted RBP26.74■■□□□ 1.87
TRIM28-204ENST00000594806 DNAJC24Q6P3W2 148 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 TMC6Q7Z403 805 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 DDI1Q8WTU0 396 aa26.74■■□□□ 1.87
TRIM28-204ENST00000594806 TMA16Q96EY4 203 aaKnown RBP26.74■■□□□ 1.87
TRIM28-204ENST00000594806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.74■■□□□ 1.87
TRIM28-204ENST00000594806 FBRSL1Q9HCM7 1045 aaKnown RBP26.74■■□□□ 1.87
TRIM28-204ENST00000594806 FAM170AA1A519 330 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 C2CD4BA6NLJ0 364 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 PDGFRAP16234 1089 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 PTPN9P43378 593 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 SLC6A11P48066 632 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 ZNF75DP51815 510 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 DEUP1Q05D60 604 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 FAM133BQ5BKY9 247 aaKnown RBP26.73■■□□□ 1.87
TRIM28-204ENST00000594806 BNIPLQ7Z465 357 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 C12orf40Q86WS4 652 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 NAT16Q8N8M0 369 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 ZNF557Q8N988 423 aaPredicted RBP26.73■■□□□ 1.87
TRIM28-204ENST00000594806 RXFP2Q8WXD0 754 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 TBCBQ99426 244 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 WDCPQ9H6R7 721 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 ARHGEF4Q9NR80 690 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 ABHD10Q9NUJ1 306 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 PARVAQ9NVD7 372 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 ARHGAP20Q9P2F6 1191 aa26.73■■□□□ 1.87
TRIM28-204ENST00000594806 SYNJ2BP-COX16A0A087WUM0 186 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 SSU72P8A0A1W2PR75 194 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 TYW5A2RUC4 315 aaKnown RBP26.72■■□□□ 1.87
TRIM28-204ENST00000594806 TMCO5BA8MYB1 307 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 AKR1B15C9JRZ8 316 aaPredicted RBP26.72■■□□□ 1.87
TRIM28-204ENST00000594806 ATG13O75143 517 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 ENDOD1O94919 500 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 KAT7O95251 611 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 EGFP01133 1207 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 TNFRSF4P43489 277 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 PIK3R6Q5UE93 754 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 OTUD1Q5VV17 481 aaPredicted RBP26.72■■□□□ 1.87
TRIM28-204ENST00000594806 GRAMD4Q6IC98 578 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 PHTF2Q8N3S3 785 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 KCNV2Q8TDN2 545 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 DNAJC17Q9NVM6 304 aaKnown RBP26.72■■□□□ 1.87
TRIM28-204ENST00000594806 COX16Q9P0S2 106 aa26.72■■□□□ 1.87
TRIM28-204ENST00000594806 MOCS2O96007 188 aaPredicted RBP26.71■■□□□ 1.87
TRIM28-204ENST00000594806 DESP17661 470 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms