RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 SEC13P55735 322 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 RNASE9P60153 205 aaKnown RBP16.34■□□□□ 0.21
ACTB-206ENST00000443528 CENPCQ03188 943 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 ZNF528Q3MIS6 628 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 ZC3H12AQ5D1E8 599 aaKnown RBP16.34■□□□□ 0.21
ACTB-206ENST00000443528 EMC10Q5UCC4 262 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 OTUD1Q5VV17 481 aaPredicted RBP16.34■□□□□ 0.21
ACTB-206ENST00000443528 TRNP1Q6NT89 227 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 RFWD3Q6PCD5 774 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 TERB1Q8NA31 727 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 MSANTD4Q8NCY6 345 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 USP33Q8TEY7 942 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 NELL1Q92832 810 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 NT5C3BQ969T7 300 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 NPY6RQ99463 290 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 C11orf70Q9BRQ4 267 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.34■□□□□ 0.211e-16■■□□□ 13.4
ACTB-206ENST00000443528 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 XPO7Q9UIA9 1087 aaKnown RBP16.34■□□□□ 0.21
ACTB-206ENST00000443528 CLEC4EQ9ULY5 219 aa16.34■□□□□ 0.21
ACTB-206ENST00000443528 KIAA1549LQ6ZVL6 1849 aa16.33■□□□□ 0.21
ACTB-206ENST00000443528 CACNA1HO95180 2353 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 A0A1W2PQJ5 194 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 TBC1D3BA6NDS4 549 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 GOLGA8SH3BPF8 625 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 K7ESF4 209 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 CYBBP04839 570 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 FLT3P36888 993 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 TNFRSF4P43489 277 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 KIR2DL1P43626 348 aaPredicted RBP16.33■□□□□ 0.2
ACTB-206ENST00000443528 DGKGP49619 791 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 ASIC2Q16515 512 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 MPPE1Q53F39 396 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 SFMBT2Q5VUG0 894 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 GRAMD4Q6IC98 578 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 PHLDB2Q86SQ0 1253 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 PHF13Q86YI8 300 aaPredicted RBP16.33■□□□□ 0.2
ACTB-206ENST00000443528 DDI1Q8WTU0 396 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 MYEOVQ96EZ4 313 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 NUP58Q9BVL2 599 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 HAUS4Q9H6D7 363 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 FAM204AQ9H8W3 233 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 SEPT11Q9NVA2 429 aaKnown RBP16.33■□□□□ 0.2
ACTB-206ENST00000443528 DDIT4Q9NX09 232 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 HCN2Q9UL51 889 aa16.33■□□□□ 0.2
ACTB-206ENST00000443528 SYNJ2BP-COX16A0A087WUM0 186 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 KCNU1A8MYU2 1149 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 PRRT4C9JH25 899 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 M0QYT0 321 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 ATG13O75143 517 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 MOCS2O96007 188 aaPredicted RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 GBP1P32455 592 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 PLA2G5P39877 138 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 PRKCIP41743 596 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 NSFP46459 744 aaKnown RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 PREPLQ4J6C6 727 aaPredicted RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 C2orf27AQ580R0 203 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 MON1BQ7L1V2 547 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 ARCQ7LC44 396 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 ZNF571Q7Z3V5 609 aaPredicted RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 CCDC26Q8TAB7 109 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 TMA16Q96EY4 203 aaKnown RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 PRICKLE1Q96MT3 831 aaPredicted RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 METTL5Q9NRN9 209 aaKnown RBP16.32■□□□□ 0.2
ACTB-206ENST00000443528 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.32■□□□□ 0.23e-20■■■■□ 20.1
ACTB-206ENST00000443528 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 ADAM22Q9P0K1 906 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 COX16Q9P0S2 106 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 CAPN11Q9UMQ6 739 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 SLC27A6Q9Y2P4 619 aa16.32■□□□□ 0.2
ACTB-206ENST00000443528 GJB6O95452 261 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 APOEP02649 317 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 GYPCP04921 128 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 SKILP12757 684 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 TNFAIP3P21580 790 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 CCR1P32246 355 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 TIE1P35590 1138 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 NBL1P41271 181 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 GSCP56915 257 aaPredicted RBP16.31■□□□□ 0.2
ACTB-206ENST00000443528 MRPS21P82921 87 aaKnown RBP16.31■□□□□ 0.2
ACTB-206ENST00000443528 DMWDQ09019 674 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 NME3Q13232 169 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 PPP2R5DQ14738 602 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 C10orf76Q5T2E6 689 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 RNF43Q68DV7 783 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 SYT13Q7L8C5 426 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 BNIPLQ7Z465 357 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 EMC1Q8N766 993 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 IL17RCQ8NAC3 791 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 CPLX3Q8WVH0 158 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 PGAP3Q96FM1 320 aaPredicted RBP16.31■□□□□ 0.2
ACTB-206ENST00000443528 BTN2A3PQ96KV6 586 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 TBCBQ99426 244 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 IRX2Q9BZI1 471 aaPredicted RBP16.31■□□□□ 0.2
ACTB-206ENST00000443528 ZDHHC4Q9NPG8 344 aa16.31■□□□□ 0.2
ACTB-206ENST00000443528 PIGVQ9NUD9 493 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms