RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ADAM22Q9P0K1 906 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 MARK1Q9P0L2 795 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 STOML2Q9UJZ1 356 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 STAP1Q9ULZ2 295 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 MSI1O43347 362 aaKnown RBP26.83■■□□□ 1.89
TRIM28-204ENST00000594806 CASP14P31944 242 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 GRSF1Q12849 480 aaKnown RBP eCLIP26.83■■□□□ 1.89
TRIM28-204ENST00000594806 LRRC32Q14392 662 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 PREPLQ4J6C6 727 aaPredicted RBP26.83■■□□□ 1.89
TRIM28-204ENST00000594806 E4F1Q66K89 784 aaPredicted RBP26.83■■□□□ 1.89
TRIM28-204ENST00000594806 TAC4Q86UU9 113 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 FAM217AQ8IXS0 508 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 DRC7Q8IY82 874 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 SYNPOQ8N3V7 929 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 TMEM105Q8N8V8 129 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 CD101Q93033 1021 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 SLC39A13Q96H72 371 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 PRRX2Q99811 253 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 P2RY13Q9BPV8 354 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 C11orf70Q9BRQ4 267 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 IER2Q9BTL4 223 aa26.83■■□□□ 1.89
TRIM28-204ENST00000594806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.83■■□□□ 1.89
TRIM28-204ENST00000594806 NDRG2Q9UN36 371 aaKnown RBP26.83■■□□□ 1.89
TRIM28-204ENST00000594806 KMT2EQ8IZD2 1858 aa26.83■■□□□ 1.88
TRIM28-204ENST00000594806 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.82■■□□□ 1.88
TRIM28-204ENST00000594806 IRAK2O43187 625 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 PI15O43692 258 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 GRAP2O75791 330 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 SERPING1P05155 500 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 SLC2A3P11169 496 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 DRD1P21728 446 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 HNRNPH3P31942 346 aaKnown RBP26.82■■□□□ 1.88
TRIM28-204ENST00000594806 SLC11A2P49281 568 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 PTP4A2Q12974 167 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 EIF4EBP2Q13542 120 aaPredicted RBP26.82■■□□□ 1.88
TRIM28-204ENST00000594806 PON2Q15165 354 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 TMEM196Q5HYL7 178 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 ZNF571Q7Z3V5 609 aaPredicted RBP26.82■■□□□ 1.88
TRIM28-204ENST00000594806 VPS36Q86VN1 386 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 GAS2L3Q86XJ1 694 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 CHFRQ96EP1 664 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 DDX50Q9BQ39 737 aaKnown RBP26.82■■□□□ 1.88
TRIM28-204ENST00000594806 KCNH6Q9H252 994 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 TMEM59LQ9UK28 342 aa26.82■■□□□ 1.88
TRIM28-204ENST00000594806 MTF2Q9Y483 593 aaPredicted RBP26.82■■□□□ 1.88
TRIM28-204ENST00000594806 GALK1P51570 392 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 VCPP55072 806 aaKnown RBP26.81■■□□□ 1.88
TRIM28-204ENST00000594806 GAB4Q2WGN9 574 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 ADGRF1Q5T601 910 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 MON1BQ7L1V2 547 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 TMEM25Q86YD3 366 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 CCDC26Q8TAB7 109 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 FCRL2Q96LA5 508 aaPredicted RBP26.81■■□□□ 1.88
TRIM28-204ENST00000594806 FAM204AQ9H8W3 233 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.81■■□□□ 1.88
TRIM28-204ENST00000594806 DLGAP2Q9P1A6 1054 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 COL4A3Q01955 1670 aa26.81■■□□□ 1.88
TRIM28-204ENST00000594806 F9P00740 461 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 APOEP02649 317 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 CHRNB1P11230 501 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 OPRD1P41143 372 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 RNASE9P60153 205 aaKnown RBP26.8■■□□□ 1.88
TRIM28-204ENST00000594806 FZD5Q13467 585 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 ANO4Q32M45 955 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 FBXO43Q4G163 708 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 C2CD6Q53TS8 623 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 TDRD12Q587J7 1177 aaKnown RBP26.8■■□□□ 1.88
TRIM28-204ENST00000594806 HGSNATQ68CP4 663 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 OR8K1Q8NGG5 319 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 NT5C3BQ969T7 300 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 XPO6Q96QU8 1125 aaKnown RBP26.8■■□□□ 1.88
TRIM28-204ENST00000594806 NPY6RQ99463 290 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 LMAN1LQ9HAT1 526 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 SLC12A6Q9UHW9 1150 aa26.8■■□□□ 1.88
TRIM28-204ENST00000594806 GOLGA8SH3BPF8 625 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 CYBBP04839 570 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 SKILP12757 684 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 CCINQ13939 588 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 ARID5BQ14865 1188 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 TSR1Q2NL82 804 aaKnown RBP26.79■■□□□ 1.88
TRIM28-204ENST00000594806 C3orf20Q8ND61 904 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 OLIG1Q8TAK6 271 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 ADAM32Q8TC27 787 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 PGAP3Q96FM1 320 aaPredicted RBP26.79■■□□□ 1.88
TRIM28-204ENST00000594806 BBS2Q9BXC9 721 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 DDIT4Q9NX09 232 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 PAXBP1Q9Y5B6 917 aa26.79■■□□□ 1.88
TRIM28-204ENST00000594806 ACSL4O60488 711 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 DCNP07585 359 aaKnown RBP26.78■■□□□ 1.88
TRIM28-204ENST00000594806 CCR1P32246 355 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 PPP2R5DQ14738 602 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 SLC25A52Q3SY17 297 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 TPGS1Q6ZTW0 290 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 NUDT18Q6ZVK8 323 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 ETFBKMTQ8IXQ9 262 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 MCOLN2Q8IZK6 566 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 PNKPQ96T60 521 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 DNAJC7Q99615 494 aa26.78■■□□□ 1.88
TRIM28-204ENST00000594806 M0QYT0 321 aa26.77■■□□□ 1.88
TRIM28-204ENST00000594806 DDX3XO00571 662 aaKnown RBP eCLIP26.77■■□□□ 1.883e-21■■□□□ 12.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms