RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 MMP8P22894 467 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 NSFP46459 744 aaKnown RBP26.89■■□□□ 1.9
TRIM28-204ENST00000594806 HARS2P49590 506 aaKnown RBP26.89■■□□□ 1.9
TRIM28-204ENST00000594806 NUBP1P53384 320 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 CENPCQ03188 943 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 RING1Q06587 406 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 CLEC16AQ2KHT3 1053 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 SPECC1LQ69YQ0 1117 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 BBS7Q8IWZ6 715 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 PJA1Q8NG27 643 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 SLC2A13Q96QE2 648 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 SFMBT1Q9UHJ3 866 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 NAALADL1Q9UQQ1 740 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 OTOL1A6NHN0 477 aaPredicted RBP26.88■■□□□ 1.89
TRIM28-204ENST00000594806 SHISA7A6NL88 538 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 LATS1O95835 1130 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 TNFAIP3P21580 790 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 GJA4P35212 333 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 CHKAP35790 457 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 MAGEA9P43362 315 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 DHCR24Q15392 516 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 XYLT1Q86Y38 959 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 PHF13Q86YI8 300 aaPredicted RBP26.88■■□□□ 1.89
TRIM28-204ENST00000594806 UNC45BQ8IWX7 931 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 DQX1Q8TE96 717 aaKnown RBP26.88■■□□□ 1.89
TRIM28-204ENST00000594806 WBP2Q969T9 261 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 PCDHB18PQ96TA0 734 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 RRN3Q9NYV6 651 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 WDR35Q9P2L0 1181 aa26.88■■□□□ 1.89
TRIM28-204ENST00000594806 MYOFQ9NZM1 2061 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 CYP17A1P05093 508 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 AVPR2P30518 371 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 GAD2Q05329 585 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 KLHL30Q0D2K2 578 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 UBXN2BQ14CS0 331 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 NUGGCQ68CJ6 796 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 RHBDF2Q6PJF5 856 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 ARCQ7LC44 396 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 TTC8Q8TAM2 541 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 SYT11Q9BT88 431 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 SPHK2Q9NRA0 654 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 SEPT11Q9NVA2 429 aaKnown RBP26.87■■□□□ 1.89
TRIM28-204ENST00000594806 TLR6Q9Y2C9 796 aa26.87■■□□□ 1.89
TRIM28-204ENST00000594806 FAM170BA6NMN3 283 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 TRDMT1O14717 391 aaKnown RBP26.86■■□□□ 1.89
TRIM28-204ENST00000594806 DAB1O75553 588 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 IGLV3-27P01718 113 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 GYPCP04921 128 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 HMBSP08397 361 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 CORO1AP31146 461 aaKnown RBP26.86■■□□□ 1.89
TRIM28-204ENST00000594806 GBP1P32455 592 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 SOX9P48436 509 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 CDK17Q00537 523 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 DCAF6Q58WW2 860 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 SYPL2Q5VXT5 272 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 VSTM4Q8IW00 320 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 AZIN2Q96A70 460 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 PIWIL1Q96J94 861 aaKnown RBP26.86■■□□□ 1.89
TRIM28-204ENST00000594806 FOXQ1Q9C009 403 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 RBSNQ9H1K0 784 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 HAUS4Q9H6D7 363 aa26.86■■□□□ 1.89
TRIM28-204ENST00000594806 KLKB1P03952 638 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 CALB1P05937 261 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 TPM1P09493 284 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 CD72P21854 359 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 NOS2P35228 1153 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 EIF2DP41214 584 aaKnown RBP26.85■■□□□ 1.89
TRIM28-204ENST00000594806 GSCP56915 257 aaPredicted RBP26.85■■□□□ 1.89
TRIM28-204ENST00000594806 TBX4P57082 545 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 TAF5Q15542 800 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 DEFB106AQ8N104 65 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 CPXM2Q8N436 756 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 CPLX3Q8WVH0 158 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 CLDN23Q96B33 292 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 IRX2Q9BZI1 471 aaPredicted RBP26.85■■□□□ 1.89
TRIM28-204ENST00000594806 AGO1Q9UL18 857 aaKnown RBP26.85■■□□□ 1.89
TRIM28-204ENST00000594806 ZNF318Q5VUA4 2279 aa26.85■■□□□ 1.89
TRIM28-204ENST00000594806 SCAMP3O14828 347 aaKnown RBP26.84■■□□□ 1.89
TRIM28-204ENST00000594806 HOXC11O43248 304 aaPredicted RBP26.84■■□□□ 1.89
TRIM28-204ENST00000594806 TRUB2O95900 331 aaKnown RBP26.84■■□□□ 1.89
TRIM28-204ENST00000594806 IGLV3-25P01717 112 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 ADH5P11766 374 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 GZMAP12544 262 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 TARSP26639 723 aaKnown RBP26.84■■□□□ 1.89
TRIM28-204ENST00000594806 MATKP42679 507 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 RPS9P46781 194 aaKnown RBP26.84■■□□□ 1.89
TRIM28-204ENST00000594806 C1QBPQ07021 282 aaKnown RBP26.84■■□□□ 1.89
TRIM28-204ENST00000594806 MTA1Q13330 715 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 DGKKQ5KSL6 1271 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 LY6G5CQ5SRR4 150 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 FAM102AQ5T9C2 384 aaPredicted RBP26.84■■□□□ 1.89
TRIM28-204ENST00000594806 ACAD10Q6JQN1 1059 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 TXNDC11Q6PKC3 985 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 MMS22LQ6ZRQ5 1243 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 DENND1CQ8IV53 801 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 CCDC105Q8IYK2 499 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 ZNF687Q8N1G0 1237 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 SLC30A5Q8TAD4 765 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 VCPIP1Q96JH7 1222 aa26.84■■□□□ 1.89
TRIM28-204ENST00000594806 TRIM5Q9C035 493 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms