RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PTCHD4Q6ZW05 846 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 PARS2Q7L3T8 475 aaKnown RBP5.9□□□□□ -1.46
SYNE2-210ENST00000553455 PRRT2Q7Z6L0 340 aaPredicted RBP5.9□□□□□ -1.46
SYNE2-210ENST00000553455 TMTC1Q8IUR5 882 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 LCORLQ8N3X6 602 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 PAF1Q8N7H5 531 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 HMGB4Q8WW32 186 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 CPT1BQ92523 772 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 NPIPB3Q92617 1050 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 LENG8Q96PV6 779 aaPredicted RBP5.9□□□□□ -1.46
SYNE2-210ENST00000553455 BRD8Q9H0E9 1235 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 SAP30LQ9HAJ7 183 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 RIC8AQ9NPQ8 531 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 DUSP22Q9NRW4 184 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 NDUFAF4Q9P032 175 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 KCND3Q9UK17 655 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 EPN1Q9Y6I3 576 aaPredicted RBP5.9□□□□□ -1.46
SYNE2-210ENST00000553455 COL4A3Q01955 1670 aa5.9□□□□□ -1.47
SYNE2-210ENST00000553455 SALL3Q9BXA9 1300 aa5.9□□□□□ -1.47
SYNE2-210ENST00000553455 CCDC187A0A096LP49 1063 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 LINC00473A8K010 186 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 E7EVH7 732 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 H0YIZ8 118 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 LARGE1O95461 756 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 ENGP17813 658 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 AARSP49588 968 aaKnown RBP eCLIP5.89□□□□□ -1.47
SYNE2-210ENST00000553455 DIO1P49895 249 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 PAPOLAP51003 745 aaKnown RBP5.89□□□□□ -1.47
SYNE2-210ENST00000553455 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 SUMO2P61956 95 aaKnown RBP5.89□□□□□ -1.47
SYNE2-210ENST00000553455 FOXI1Q12951 378 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 SEMA3BQ13214 749 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 RPS6KA2Q15349 733 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 ANKRD45Q5TZF3 282 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 JAKMIP3Q5VZ66 844 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 ANKS1BQ7Z6G8 1248 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 VRK3Q8IV63 474 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 P3H2Q8IVL5 708 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 SIRT6Q8N6T7 355 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 PNPLA1Q8N8W4 532 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 VPS50Q96JG6 964 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 THAP7Q9BT49 309 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-210ENST00000553455 FSD1LQ9BXM9 530 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 RASSF1Q9NS23 344 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 ANAPC4Q9UJX5 808 aa5.89□□□□□ -1.47
SYNE2-210ENST00000553455 UBE2J1Q9Y385 318 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-210ENST00000553455 CES2O00748 559 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 TMPRSS11DO60235 418 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 KRT38O76015 456 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 ESRRBO95718 433 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 MBPP02686 304 aaPredicted RBP5.88□□□□□ -1.47
SYNE2-210ENST00000553455 DLDP09622 509 aaKnown RBP5.88□□□□□ -1.47
SYNE2-210ENST00000553455 MAKP20794 623 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 FPR3P25089 353 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 CYP2C18P33260 490 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 THBS4P35443 961 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 GRIA3P42263 894 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 CCR5P51681 352 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
SYNE2-210ENST00000553455 MPP3Q13368 585 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 FAM187BQ17R55 369 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 PLAC9Q5JTB6 97 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 Q6ZPA2 131 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 SYT13Q7L8C5 426 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 KRT27Q7Z3Y8 459 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 WDR53Q7Z5U6 358 aaPredicted RBP5.88□□□□□ -1.47
SYNE2-210ENST00000553455 BEND2Q8NDZ0 799 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 ACTRT2Q8TDY3 377 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 GOLGA1Q92805 767 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 COG8Q96MW5 612 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 TWNKQ96RR1 684 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 EIF3CQ99613 913 aaKnown RBP5.88□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF747Q9BV97 191 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 CCDC134Q9H6E4 229 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 FBXO28Q9NVF7 368 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 FOXJ2Q9P0K8 574 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 MGAT4CQ9UBM8 478 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 AMFRQ9UKV5 643 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 CRYL1Q9Y2S2 319 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 PCDHB2Q9Y5E7 798 aa5.88□□□□□ -1.47
SYNE2-210ENST00000553455 ARID1BQ8NFD5 2236 aaPredicted RBP5.88□□□□□ -1.47
SYNE2-210ENST00000553455 NKX2-8O15522 239 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 PRAMEF2O60811 474 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 HEXIM1O94992 359 aaKnown RBP5.87□□□□□ -1.47
SYNE2-210ENST00000553455 TFRCP02786 760 aaKnown RBP5.87□□□□□ -1.47
SYNE2-210ENST00000553455 EBLN1P0CF75 366 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 RXRAP19793 462 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 LMAN2Q12907 356 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 RALBP1Q15311 655 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 RNASE12Q5GAN4 147 aaKnown RBP5.87□□□□□ -1.47
SYNE2-210ENST00000553455 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 ACSM6Q6P461 480 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 ANKRD16Q6P6B7 361 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 CEP70Q8NHQ1 597 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 REXO5Q96IC2 774 aaKnown RBP5.87□□□□□ -1.47
SYNE2-210ENST00000553455 PDLIM2Q96JY6 352 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 CHODLQ9H9P2 273 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 LIN7CQ9NUP9 197 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms