RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TTC16Q8NEE8 873 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 CLEC4CQ8WTT0 213 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 XPO4Q9C0E2 1151 aaKnown RBP26.96■■□□□ 1.91
TRIM28-204ENST00000594806 HPS4Q9NQG7 708 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 GTSE1Q9NYZ3 720 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 AIPL1Q9NZN9 384 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 RASAL2Q9UJF2 1139 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 ZNF510Q9Y2H8 683 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 PIAS3Q9Y6X2 628 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 ITIH6Q6UXX5 1313 aa26.95■■□□□ 1.91
TRIM28-204ENST00000594806 FMO1Q01740 532 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 TPRG1Q6ZUI0 275 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 TOGARAM2Q6ZUX3 1019 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 ERICH1Q86X53 443 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 ZNF397Q8NF99 534 aaPredicted RBP26.95■■□□□ 1.9
TRIM28-204ENST00000594806 FAM149B1Q96BN6 582 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 OSBPL6Q9BZF3 934 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 DCLK3Q9C098 648 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 EBF3Q9H4W6 596 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 TBC1D17Q9HA65 648 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 POPDC2Q9HBU9 364 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 HBS1LQ9Y450 684 aaKnown RBP26.95■■□□□ 1.9
TRIM28-204ENST00000594806 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.95■■□□□ 1.92e-9■■■■□ 25.6
TRIM28-204ENST00000594806 WNT6Q9Y6F9 365 aa26.95■■□□□ 1.9
TRIM28-204ENST00000594806 TRIOO75962 3097 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 KANSL1LA0AUZ9 987 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 MDM4O15151 490 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 CYP1A1P04798 512 aaPredicted RBP26.94■■□□□ 1.9
TRIM28-204ENST00000594806 CHRNB2P17787 502 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 SCNN1AP37088 669 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 GABRB2P47870 512 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 YWHAZP63104 245 aaKnown RBP26.94■■□□□ 1.9
TRIM28-204ENST00000594806 NOMO3P69849 1222 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 ARID5AQ03989 594 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 TNK2Q07912 1038 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 PTPN20Q4JDL3 420 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 SFMBT2Q5VUG0 894 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 TRIM68Q6AZZ1 485 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 IRF2BP2Q7Z5L9 587 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 MIB1Q86YT6 1006 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 ADGRG2Q8IZP9 1017 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 SLC20A1Q8WUM9 679 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 EDEM1Q92611 657 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 EXOC4Q96A65 974 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 C18orf8Q96DM3 657 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 ECT2Q9H8V3 914 aa26.94■■□□□ 1.9
TRIM28-204ENST00000594806 LRRC53A6NM62 1247 aa26.93■■□□□ 1.9
TRIM28-204ENST00000594806 STK25O00506 426 aa26.93■■□□□ 1.9
TRIM28-204ENST00000594806 NCAM1P13591 858 aa26.93■■□□□ 1.9
TRIM28-204ENST00000594806 IER5LQ5T953 404 aa26.93■■□□□ 1.9
TRIM28-204ENST00000594806 ASTLQ6HA08 431 aaPredicted RBP26.93■■□□□ 1.9
TRIM28-204ENST00000594806 PLD4Q96BZ4 506 aa26.93■■□□□ 1.9
TRIM28-204ENST00000594806 AGPAT1Q99943 283 aa26.93■■□□□ 1.9
TRIM28-204ENST00000594806 LINC00597Q9H2U6 94 aa26.93■■□□□ 1.9
TRIM28-204ENST00000594806 SPECC1L-ADORA2AF8WAN1 911 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 CAPN9O14815 690 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 HSF2BPO75031 334 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 STC2O76061 302 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 PDGFBP01127 241 aaPredicted RBP26.92■■□□□ 1.9
TRIM28-204ENST00000594806 ERBB2P04626 1255 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 IRF1P10914 325 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 ARSAP15289 507 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 CTHP32929 405 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 SLC6A3Q01959 620 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 ASIC2Q16515 512 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 OR6B2Q6IFH4 312 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 PPP1R2P3Q6NXS1 205 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 FLCNQ8NFG4 579 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 FAM3CQ92520 227 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 SYN2Q92777 582 aaPredicted RBP26.92■■□□□ 1.9
TRIM28-204ENST00000594806 CAPN11Q9UMQ6 739 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 ZDBF2Q9HCK1 2354 aa26.92■■□□□ 1.9
TRIM28-204ENST00000594806 SLC12A8A0AV02 714 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 NCAM2O15394 837 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 GREM1O60565 184 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 AOC1P19801 751 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 PRKCIP41743 596 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 ZBED6P86452 979 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 NNTQ13423 1086 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 NAA35Q5VZE5 725 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 SARM1Q6SZW1 724 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 OLFML1Q6UWY5 402 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 SLC26A9Q7LBE3 791 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 TJP2Q9UDY2 1190 aa26.91■■□□□ 1.9
TRIM28-204ENST00000594806 FYNP06241 537 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 UNGP13051 313 aaPredicted RBP26.9■■□□□ 1.9
TRIM28-204ENST00000594806 TRIM14Q14142 442 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 TRIP4Q15650 581 aaPredicted RBP26.9■■□□□ 1.9
TRIM28-204ENST00000594806 CWF19L1Q69YN2 538 aaKnown RBP26.9■■□□□ 1.9
TRIM28-204ENST00000594806 Q6ZNB5 142 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 FAM183BPQ6ZVS7 135 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 CPA5Q8WXQ8 436 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 SERPINB11Q96P15 392 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 LTB4R2Q9NPC1 389 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 TMEM51Q9NW97 253 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 LUC7L2Q9Y383 392 aaKnown RBP26.9■■□□□ 1.9
TRIM28-204ENST00000594806 SIT1Q9Y3P8 196 aa26.9■■□□□ 1.9
TRIM28-204ENST00000594806 BZW2Q9Y6E2 419 aaKnown RBP26.9■■□□□ 1.9
TRIM28-204ENST00000594806 MIA3Q5JRA6 1907 aa26.89■■□□□ 1.9
TRIM28-204ENST00000594806 ADH1CP00326 375 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms