RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 LSM8O95777 96 aaKnown RBP27.02■■□□□ 1.92
TRIM28-204ENST00000594806 MLF2Q15773 248 aaPredicted RBP27.02■■□□□ 1.92
TRIM28-204ENST00000594806 C10orf120Q5SQS8 335 aa27.02■■□□□ 1.92
TRIM28-204ENST00000594806 BSPRYQ5W0U4 402 aa27.02■■□□□ 1.92
TRIM28-204ENST00000594806 SIX5Q8N196 739 aa27.02■■□□□ 1.92
TRIM28-204ENST00000594806 WDTC1Q8N5D0 677 aa27.02■■□□□ 1.92
TRIM28-204ENST00000594806 OSCP1Q8WVF1 389 aa27.02■■□□□ 1.92
TRIM28-204ENST00000594806 TICRRQ7Z2Z1 1910 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 E2F8A0AVK6 867 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 YJEFN3A6XGL0 299 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 E7ENQ6 273 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 CBFA2T2O43439 604 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 STARD6P59095 220 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 ZXDBP98169 803 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 CDR2Q01850 454 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 RSRC2Q7L4I2 434 aaKnown RBP27.01■■□□□ 1.91
TRIM28-204ENST00000594806 NOP9Q86U38 636 aaKnown RBP27.01■■□□□ 1.91
TRIM28-204ENST00000594806 PBXIP1Q96AQ6 731 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 PPP1R13BQ96KQ4 1090 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 ZFRQ96KR1 1074 aaKnown RBP27.01■■□□□ 1.91
TRIM28-204ENST00000594806 KLF16Q9BXK1 252 aaPredicted RBP27.01■■□□□ 1.91
TRIM28-204ENST00000594806 C8orf33Q9H7E9 229 aaPredicted RBP27.01■■□□□ 1.91
TRIM28-204ENST00000594806 SMPD4Q9NXE4 827 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 IFNKQ9P0W0 207 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 TBC1D14Q9P2M4 693 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 CYTH4Q9UIA0 394 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 CA14Q9ULX7 337 aa27.01■■□□□ 1.91
TRIM28-204ENST00000594806 FERP16591 822 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 PBX1P40424 430 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 IFNAR2P48551 515 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 COG7P83436 770 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 TRIM72Q6ZMU5 477 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 BEND5Q7L4P6 421 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 PASD1Q8IV76 773 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 IPO4Q8TEX9 1081 aaKnown RBP27■■□□□ 1.91
TRIM28-204ENST00000594806 RNF139Q8WU17 664 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 OTUB2Q96DC9 234 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 ANP32EQ9BTT0 268 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 MIS12Q9H081 205 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 MFSD1Q9H3U5 465 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 DUS2Q9NX74 493 aaKnown RBP27■■□□□ 1.91
TRIM28-204ENST00000594806 CFAP97Q9P2B7 532 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 NOCTQ9UK39 431 aaKnown RBP27■■□□□ 1.91
TRIM28-204ENST00000594806 STRIP2Q9ULQ0 834 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 SH3BP1Q9Y3L3 701 aa27■■□□□ 1.91
TRIM28-204ENST00000594806 KRBA1A5PL33 1030 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 E5RJQ4 531 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 MAN2B1O00754 1011 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 TBX18O95935 607 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 LTFP02788 710 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 ITPRIPL2Q3MIP1 535 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 SCUBE3Q8IX30 993 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 MSANTD4Q8NCY6 345 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 RNF214Q8ND24 703 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 C1orf131Q8NDD1 294 aaKnown RBP26.99■■□□□ 1.91
TRIM28-204ENST00000594806 RIN3Q8TB24 985 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 NDRG1Q92597 394 aaKnown RBP26.99■■□□□ 1.91
TRIM28-204ENST00000594806 ATP2A3Q93084 1043 aa26.99■■□□□ 1.91
TRIM28-204ENST00000594806 AMPD2Q01433 879 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 RUNX3Q13761 415 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 TAF3Q5VWG9 929 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 ZDHHC17Q8IUH5 632 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 FBXL6Q8N531 539 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 BAP1Q92560 729 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 ZFYVE19Q96K21 471 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 CPXM1Q96SM3 734 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 NELL2Q99435 816 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 DDX23Q9BUQ8 820 aaKnown RBP26.98■■□□□ 1.91
TRIM28-204ENST00000594806 TTYH3Q9C0H2 523 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 NUCKS1Q9H1E3 243 aaKnown RBP26.98■■□□□ 1.91
TRIM28-204ENST00000594806 HEBP1Q9NRV9 189 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 MRPS17Q9Y2R5 130 aaKnown RBP26.98■■□□□ 1.91
TRIM28-204ENST00000594806 F5P12259 2224 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 COL4A2P08572 1712 aa26.98■■□□□ 1.91
TRIM28-204ENST00000594806 A0A1W2PQJ5 194 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 FAM86C2PA6NEL3 165 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 PIK3R2O00459 728 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 PAPSS1O43252 624 aaPredicted RBP26.97■■□□□ 1.91
TRIM28-204ENST00000594806 GLI1P08151 1106 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 MMEP08473 750 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 NR1H3Q13133 447 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 MSANTD2Q6P1R3 559 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 HFE2Q6ZVN8 426 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 HTR3DQ70Z44 454 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 CPA6Q8N4T0 437 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 LRFN3Q9BTN0 628 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 SYNCQ9H7C4 482 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 ASNSD1Q9NWL6 643 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 MARCH2Q9P0N8 246 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 LSM7Q9UK45 103 aaKnown RBP26.97■■□□□ 1.91
TRIM28-204ENST00000594806 NUDT5Q9UKK9 219 aa26.97■■□□□ 1.91
TRIM28-204ENST00000594806 NFATC1O95644 943 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 CLCN5P51795 746 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 KPNA1P52294 538 aaPredicted RBP26.96■■□□□ 1.91
TRIM28-204ENST00000594806 EFEMP1Q12805 493 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 EML3Q32P44 896 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 EFHC1Q5JVL4 640 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 ZNF852Q6ZMS4 543 aa26.96■■□□□ 1.91
TRIM28-204ENST00000594806 RALGPS2Q86X27 583 aaPredicted RBP26.96■■□□□ 1.91
TRIM28-204ENST00000594806 SUGP1Q8IWZ8 645 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms