RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YOR304C-AO14468 76 aa-7.29□□□□□ -3.58
snR40snR40 YCF1P39109 1515 aaKnown RBP-7.29□□□□□ -3.58
snR40snR40 YER137CP40083 148 aaKnown RBP-7.33□□□□□ -3.58
snR40snR40 ESC1Q03661 1658 aaKnown RBP-7.33□□□□□ -3.58
snR40snR40 YCL001W-BQ96VH2 84 aa-7.34□□□□□ -3.58
snR40snR40 DOP1Q03921 1698 aa-7.35□□□□□ -3.59
snR40snR40 IQG1Q12280 1495 aa-7.36□□□□□ -3.59
snR40snR40 TOM1Q03280 3268 aa-7.39□□□□□ -3.59
snR40snR40 ERI1P62651 68 aaKnown RBP-7.4□□□□□ -3.59
snR40snR40 YOL131WQ08270 108 aa-7.48□□□□□ -3.61
snR40snR40 YJL133C-AQ3E7A3 74 aa-7.5□□□□□ -3.61
snR40snR40 TCB3Q03640 1545 aaKnown RBP-7.52□□□□□ -3.61
snR40snR40 YOL166W-AQ8TGJ1 51 aa-7.54□□□□□ -3.62
snR40snR40 VMR1P38735 1592 aa-7.59□□□□□ -3.62
snR40snR40 NUP188P52593 1655 aaKnown RBP-7.6□□□□□ -3.63
snR40snR40 CWP2P43497 92 aa-7.6□□□□□ -3.63
snR40snR40 IML1P47170 1584 aa-7.61□□□□□ -3.63
snR40snR40 LTE1P07866 1435 aa-7.66□□□□□ -3.64
snR40snR40 YPR010C-AA5Z2X5 72 aa-7.77□□□□□ -3.65
snR40snR40 CDC25P04821 1589 aa-7.77□□□□□ -3.65
snR40snR40 YBT1P32386 1661 aa-7.78□□□□□ -3.65
snR40snR40 YCR075W-AQ3E830 75 aa-7.78□□□□□ -3.65
snR40snR40 YFL041W-AQ3E817 63 aa-7.79□□□□□ -3.66
snR40snR40 UFD4P33202 1483 aa-7.87□□□□□ -3.67
snR40snR40 YSY6P38374 65 aa-7.88□□□□□ -3.67
snR40snR40 STU1P38198 1513 aa-7.91□□□□□ -3.68
snR40snR40 DDR2P89113 61 aa-7.94□□□□□ -3.68
snR40snR40 ZEO1Q08245 113 aa-8.02□□□□□ -3.69
snR40snR40 HIR3P47171 1648 aa-8.09□□□□□ -3.7
snR40snR40 ATG2P53855 1592 aa-8.1□□□□□ -3.71
snR40snR40 COX9P07255 59 aa-8.11□□□□□ -3.71
snR40snR40 YLL066W-BQ8TGJ7 56 aa-8.18□□□□□ -3.72
snR40snR40 SCC2Q04002 1493 aa-8.22□□□□□ -3.73
snR40snR40 YIL102C-AQ2V2P5 75 aa-8.25□□□□□ -3.73
snR40snR40 BUD3P25558 1636 aa-8.27□□□□□ -3.73
snR40snR40 MYO4P32492 1471 aa-8.39□□□□□ -3.75
snR40snR40 YLR342W-AQ3E810 57 aa-8.45□□□□□ -3.76
snR40snR40 YJL127C-BQ3E828 52 aa-8.45□□□□□ -3.76
snR40snR40 NUP159P40477 1460 aa-8.46□□□□□ -3.76
snR40snR40 PMP3P87284 55 aa-8.49□□□□□ -3.77
snR40snR40 YHR213W-AQ8TGT4 77 aa-8.51□□□□□ -3.77
snR40snR40 NUP192P47054 1683 aa-8.59□□□□□ -3.79
snR40snR40 SKI3P17883 1432 aaKnown RBP-8.67□□□□□ -3.8
snR40snR40 NUP170P38181 1502 aa-8.69□□□□□ -3.8
snR40snR40 USO1P25386 1790 aa-8.7□□□□□ -3.8
snR40snR40 YKL023C-AQ2V2P3 75 aa-8.7□□□□□ -3.8
snR40snR40 PAI3P01094 68 aa-8.72□□□□□ -3.81
snR40snR40 MON2P48563 1636 aaPredicted RBP-8.83□□□□□ -3.82
snR40snR40 CHC1P22137 1653 aaKnown RBP-8.91□□□□□ -3.84
snR40snR40 PEP1P32319 1579 aa-8.94□□□□□ -3.84
snR40snR40 HOR7Q05827 59 aa-9□□□□□ -3.85
snR40snR40 SMX2P40204 77 aaKnown RBP-9.05□□□□□ -3.86
snR40snR40 TOM7P53507 60 aa-9.16□□□□□ -3.88
snR40snR40 VMA9Q3E7B6 73 aa-9.2□□□□□ -3.88
snR40snR40 RKR1Q04781 1562 aa-9.21□□□□□ -3.88
snR40snR40 MLP2P40457 1679 aa-9.25□□□□□ -3.89
snR40snR40 SPT6P23615 1451 aaKnown RBP-9.32□□□□□ -3.9
snR40snR40 YFR010W-AP0C5N0 62 aa-9.97□□□□□ -4.01
snR40snR40 NCE101Q02820 53 aa-10.39□□□□□ -4.07
snR40snR40 Q0297Q9ZZV8 51 aa-10.59□□□□□ -4.1
snR40snR40 RPL39P04650 51 aa-10.85□□□□□ -4.15
snR40snR40 YIL046W-AQ3E7Z4 54 aa-11.76□□□□□ -4.29
snR40snR40 YDR034W-BQ6Q5X2 51 aa-12.91□□□□□ -4.48
Retrieved 63 of 5,963 RNA–protein pairs in 4.5 ms