RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 NDUFV1P49821 464 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 HMGA2P52926 109 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 CACNB3P54284 484 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 UCP3P55916 312 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 MPP3Q13368 585 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 TUBB3Q13509 450 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 GALEQ14376 348 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 KIAA0753Q2KHM9 967 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 CCDC88AQ3V6T2 1871 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 LONRF3Q496Y0 759 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 VWA1Q6PCB0 445 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 APOA5Q6Q788 366 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 PCSK4Q6UW60 755 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 ZNF783Q6ZMS7 281 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 TSHZ1Q6ZSZ6 1077 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 DGKHQ86XP1 1220 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 SLC44A3Q8N4M1 653 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 IL17REQ8NFR9 667 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 OR6B3Q8NGW1 331 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 C8orf48Q96LL4 319 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 SLC46A1Q96NT5 459 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 SPATA5L1Q9BVQ7 753 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 DPH1Q9BZG8 443 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 BHMT2Q9H2M3 363 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 XPR1Q9UBH6 696 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 TPCN1Q9ULQ1 816 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 DMRT1Q9Y5R6 373 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 SALL3Q9BXA9 1300 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 WDR33Q9C0J8 1336 aaKnown RBP4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 NUP98P52948 1817 aa4.42□□□□□ -1.7
CKS1BP3-201ENST00000600888 DICER1Q9UPY3 1922 aaKnown RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 GOLGB1Q14789 3259 aaKnown RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 MYO1FO00160 1098 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 GOLIM4O00461 696 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 DCLK1O15075 740 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 TBX3O15119 743 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 YY2O15391 372 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 PROM1O43490 865 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 FRS3O43559 492 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 PEX1O43933 1283 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 TBC1D4O60343 1298 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 CYP19A1P11511 503 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 GYS1P13807 737 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 PPP3CBP16298 524 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 RHCEP18577 417 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 EN2P19622 333 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 YY1P25490 414 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 PRKAR2BP31323 418 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 ADRA1BP35368 520 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 FOLR3P41439 243 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 SLC11A2P49281 568 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 ZNF134P52741 427 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 FAM193AP78312 1265 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 RHDQ02161 417 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 CTBP1Q13363 440 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 IQCB1Q15051 598 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 RALBP1Q15311 655 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 LMBRD2Q68DH5 695 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 PPP4R4Q6NUP7 873 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 ZNF790Q6PG37 636 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 DARS2Q6PI48 645 aaKnown RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 DNAJC5GQ8N7S2 189 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 GPR150Q8NGU9 434 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 LPIN2Q92539 896 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 TIFAQ96CG3 184 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 SUCLG2Q96I99 432 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 OSBPL9Q96SU4 736 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 TEX13AQ9BXU3 409 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 AMBRA1Q9C0C7 1298 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 TTYH3Q9C0H2 523 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 SMURF2Q9HAU4 748 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 TMX2Q9Y320 296 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 SOS1Q07889 1333 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 ANKRD31Q8N7Z5 1873 aa4.41□□□□□ -1.7
CKS1BP3-201ENST00000600888 HEG1Q9ULI3 1381 aa4.4□□□□□ -1.7
CKS1BP3-201ENST00000600888 ARFGEF2Q9Y6D5 1785 aa4.4□□□□□ -1.7
CKS1BP3-201ENST00000600888 C10orf71Q711Q0 1435 aa4.4□□□□□ -1.7
CKS1BP3-201ENST00000600888 A0A087WWL8 130 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 ISM1B1AKI9 464 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 MYO1CO00159 1063 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 ATXN1LP0C7T5 689 aaKnown RBP4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 CYP2C9P11712 490 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 TM4SF1P30408 202 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 RFC4P35249 363 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 VIPR2P41587 438 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 EIF5P55010 431 aaKnown RBP4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 SUMO3P55854 103 aaPredicted RBP4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 TEFQ10587 303 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 SLC39A6Q13433 755 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 KIAA0895LQ68EN5 471 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 TMEM108Q6UXF1 575 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 SMIM5Q71RC9 77 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 DNAJC10Q8IXB1 793 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 TTC5Q8N0Z6 440 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 SLC15A4Q8N697 577 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 TOR1AIP2Q8NFQ8 470 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 LRTOMTQ8WZ04 291 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 APIPQ96GX9 242 aa4.4□□□□□ -1.71
CKS1BP3-201ENST00000600888 PGBD1Q96JS3 809 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms