RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 STAT1P42224 750 aa27.09■■□□□ 1.93
TRIM28-204ENST00000594806 GRM2Q14416 872 aa27.09■■□□□ 1.93
TRIM28-204ENST00000594806 NAP1L5Q96NT1 182 aaPredicted RBP27.09■■□□□ 1.93
TRIM28-204ENST00000594806 RNF38Q9H0F5 515 aa27.09■■□□□ 1.93
TRIM28-204ENST00000594806 SMG9Q9H0W8 520 aaKnown RBP27.09■■□□□ 1.93
TRIM28-204ENST00000594806 SMOC2Q9H3U7 446 aa27.09■■□□□ 1.93
TRIM28-204ENST00000594806 NLRC4Q9NPP4 1024 aa27.09■■□□□ 1.93
TRIM28-204ENST00000594806 CEP83Q9Y592 693 aa27.09■■□□□ 1.93
TRIM28-204ENST00000594806 TMEM221A6NGB7 291 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 M0R296 226 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 EPHB6O15197 1021 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 COCHO43405 550 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 TLR5O60602 858 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 CYP11B1P15538 503 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 SOX5P35711 763 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 UBASH3AP57075 661 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 ADIGQ0VDE8 80 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 DENND1BQ6P3S1 775 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 BMP8AQ7Z5Y6 402 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 ZNF677Q86XU0 584 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 IRGQQ8WZA9 623 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 ASIC4Q96FT7 647 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 NOX5Q96PH1 765 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 ULBP1Q9BZM6 244 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.08■■□□□ 1.938e-11■□□□□ 8
TRIM28-204ENST00000594806 NAGPAQ9UK23 515 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 MYO6Q9UM54 1294 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 CCL26Q9Y258 94 aa27.08■■□□□ 1.93
TRIM28-204ENST00000594806 A0A1W2PQH9 124 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 CFHP08603 1231 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 PNMA6AP0CW24 399 aaPredicted RBP27.07■■□□□ 1.92
TRIM28-204ENST00000594806 MBL2P11226 248 aaPredicted RBP27.07■■□□□ 1.92
TRIM28-204ENST00000594806 ATP5C1P36542 298 aaKnown RBP27.07■■□□□ 1.92
TRIM28-204ENST00000594806 SNX16P57768 344 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 USP4Q13107 963 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 ZNF77Q15935 545 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 CC2D1AQ6P1N0 951 aaPredicted RBP27.07■■□□□ 1.92
TRIM28-204ENST00000594806 CACNA2D4Q7Z3S7 1137 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 SCD5Q86SK9 330 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 GPIHBP1Q8IV16 184 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 LRRC3BQ96PB8 259 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 SLC4A5Q9BY07 1137 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 NACA2Q9H009 215 aa27.07■■□□□ 1.92
TRIM28-204ENST00000594806 KIF26AQ9ULI4 1882 aaPredicted RBP27.06■■□□□ 1.92
TRIM28-204ENST00000594806 SART1O43290 800 aaKnown RBP27.06■■□□□ 1.92
TRIM28-204ENST00000594806 TPM3P06753 285 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 CCDC172P0C7W6 258 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 RARGP13631 454 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 RGS7P49802 495 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 MLLT6P55198 1093 aaPredicted RBP27.06■■□□□ 1.92
TRIM28-204ENST00000594806 SH3RF2Q8TEC5 729 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 SHDQ96IW2 340 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 EDEM3Q9BZQ6 932 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 CCSER2Q9H7U1 834 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 NMUR1Q9HB89 426 aa27.06■■□□□ 1.92
TRIM28-204ENST00000594806 PRR33A8MZF0 331 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 LCP1P13796 627 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 DAOAP59103 153 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 YWHAGP61981 247 aaKnown RBP eCLIP27.05■■□□□ 1.92
TRIM28-204ENST00000594806 PRKCQQ04759 706 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 MTF1Q14872 753 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 TMEM31Q5JXX7 168 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 TMEM110Q86TL2 294 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 PDCL3Q9H2J4 239 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 ST7Q9NRC1 585 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 OSER1Q9NX31 292 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 DNMT3LQ9UJW3 386 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 CPQQ9Y646 472 aa27.05■■□□□ 1.92
TRIM28-204ENST00000594806 LEFTY2O00292 366 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 GFPT2O94808 682 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 GLULP15104 373 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 PGFP49763 221 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 GOLGA8FQ08AF8 430 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 GOLGA8DPQ0D2H9 430 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 PDGFRLQ15198 375 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 SLC44A4Q53GD3 710 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 CSGALNACT1Q8TDX6 532 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 EPS8L1Q8TE68 723 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 IQCDQ96DY2 449 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 NUP58Q9BVL2 599 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 ARHGEF3Q9NR81 526 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 ABCC13Q9NSE7 274 aa27.04■■□□□ 1.92
TRIM28-204ENST00000594806 OLA1Q9NTK5 396 aaKnown RBP27.04■■□□□ 1.92
TRIM28-204ENST00000594806 ARNTLO00327 626 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 CDH5P33151 784 aaPredicted RBP27.03■■□□□ 1.92
TRIM28-204ENST00000594806 PDCLQ13371 301 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 FIGNQ5HY92 759 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 BTBD8Q5XKL5 378 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 C1orf228Q6PIY5 440 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 BHLHA9Q7RTU4 235 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 TMEM35BQ8NCS4 154 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 DDX1Q92499 740 aaKnown RBP27.03■■□□□ 1.92
TRIM28-204ENST00000594806 GOLGA1Q92805 767 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 MSANTD3Q96H12 275 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 FAM83CQ9BQN1 747 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 TRIM62Q9BVG3 475 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 C11orf16Q9NQ32 467 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 GKN1Q9NS71 199 aa27.03■■□□□ 1.92
TRIM28-204ENST00000594806 SLC9A3R1O14745 358 aaPredicted RBP27.02■■□□□ 1.92
TRIM28-204ENST00000594806 GABBR2O75899 941 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms